RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 ZNF623O75123 536 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 RECQL4O94761 1208 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 CLTBP09497 229 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 FECHP22830 423 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 CASP14P31944 242 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 AP3M2P53677 418 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 FAM189BP81408 668 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 GOLGA8FQ08AF8 430 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 GOLGA8DPQ0D2H9 430 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 ZBTB6Q15916 424 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 EXOC3L4Q17RC7 722 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 KLHDC7AQ5VTJ3 777 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 TWF2Q6IBS0 349 aaKnown RBP8.92□□□□□ -0.98
USP4-210ENST00000483212 JADE1Q6IE81 842 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 USP37Q86T82 979 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 ZNF598Q86UK7 904 aaKnown RBP8.92□□□□□ -0.98
USP4-210ENST00000483212 CD302Q8IX05 232 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 DRC7Q8IY82 874 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 TMEM130Q8N3G9 435 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 EHBP1Q8NDI1 1231 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 GSTCDQ8NEC7 633 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 CACTINQ8WUQ7 758 aaKnown RBP8.92□□□□□ -0.98
USP4-210ENST00000483212 ZMAT2Q96NC0 199 aaKnown RBP8.92□□□□□ -0.98
USP4-210ENST00000483212 FNBP1Q96RU3 617 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 NUP58Q9BVL2 599 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 IFIH1Q9BYX4 1025 aaKnown RBP8.92□□□□□ -0.98
USP4-210ENST00000483212 EDEM3Q9BZQ6 932 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 KCNF1Q9H3M0 494 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 HIPK3Q9H422 1215 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 RGS18Q9NS28 235 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 FAM207AQ9NSI2 230 aaPredicted RBP8.92□□□□□ -0.98
USP4-210ENST00000483212 SIX4Q9UIU6 781 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 FBXL5Q9UKA1 691 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 CAPN11Q9UMQ6 739 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 ATP11BQ9Y2G3 1177 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 DERAQ9Y315 318 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 PCDHB2Q9Y5E7 798 aa8.92□□□□□ -0.98
USP4-210ENST00000483212 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.92□□□□□ -0.98
USP4-210ENST00000483212 MKI67P46013 3256 aaKnown RBP8.91□□□□□ -0.98
USP4-210ENST00000483212 A0A0U1RQF3 1178 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 TRIM43BA6NCK2 446 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 AKR1B15C9JRZ8 316 aaPredicted RBP8.91□□□□□ -0.98
USP4-210ENST00000483212 PTGESO14684 152 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 KIAA0355O15063 1070 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 INPPL1O15357 1258 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 CST3P01034 146 aaPredicted RBP8.91□□□□□ -0.98
USP4-210ENST00000483212 HLA-DRAP01903 254 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 UCHL3P15374 230 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 KCNE1P15382 129 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 ZSCAN20P17040 1043 aaPredicted RBP8.91□□□□□ -0.98
USP4-210ENST00000483212 TNNI1P19237 187 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 AKAP5P24588 427 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 ITGB8P26012 769 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 CYP2C18P33260 490 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 RAB27AP51159 221 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 GSDMDP57764 484 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 NAB2Q15742 525 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 DUOXA2Q1HG44 320 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 E4F1Q66K89 784 aaPredicted RBP8.91□□□□□ -0.98
USP4-210ENST00000483212 IQCEQ6IPM2 695 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 PHLDB3Q6NSJ2 640 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 GJB7Q6PEY0 223 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 AGMOQ6ZNB7 445 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 FAM43BQ6ZT52 329 aaPredicted RBP8.91□□□□□ -0.98
USP4-210ENST00000483212 TRAPPC11Q7Z392 1133 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 ECHDC2Q86YB7 292 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 NT5DC4Q86YG4 428 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 TMEM139Q8IV31 216 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 ARHGEF19Q8IW93 802 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 C1orf127Q8N9H9 656 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 CCDC150Q8NCX0 1101 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 FBXL13Q8NEE6 735 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 DBF4BQ8NFT6 615 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 HELQQ8TDG4 1101 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 TRIM43Q96BQ3 446 aaPredicted RBP8.91□□□□□ -0.98
USP4-210ENST00000483212 IQCDQ96DY2 449 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 SCLYQ96I15 445 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 DNAJC7Q99615 494 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 ADAM2Q99965 735 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 PPP1R12CQ9BZL4 782 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 TRIM6Q9C030 488 aaPredicted RBP8.91□□□□□ -0.98
USP4-210ENST00000483212 MTMR12Q9C0I1 747 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 GPR88Q9GZN0 384 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 TSPYL2Q9H2G4 693 aaPredicted RBP8.91□□□□□ -0.98
USP4-210ENST00000483212 SCUBE2Q9NQ36 999 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 RAB20Q9NX57 234 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 CEP72Q9P209 647 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 C2CD2Q9Y426 696 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 FHOD1Q9Y613 1164 aa8.91□□□□□ -0.98
USP4-210ENST00000483212 KIAA0100Q14667 2235 aaKnown RBP8.9□□□□□ -0.98
USP4-210ENST00000483212 ALPK3Q96L96 1907 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 PDCD11Q14690 1871 aaKnown RBP8.9□□□□□ -0.98
USP4-210ENST00000483212 SMIM28A0A1B0GU29 152 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 GOLGA6L6A8MZA4 724 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 ZC3H11AO75152 810 aaKnown RBP eCLIP8.9□□□□□ -0.98
USP4-210ENST00000483212 PARNO95453 639 aaKnown RBP8.9□□□□□ -0.98
USP4-210ENST00000483212 ITGA4P13612 1032 aa8.9□□□□□ -0.98
USP4-210ENST00000483212 TRIM21P19474 475 aaKnown RBP8.9□□□□□ -0.98
USP4-210ENST00000483212 HNRNPH3P31942 346 aaKnown RBP8.9□□□□□ -0.98
USP4-210ENST00000483212 AFF1P51825 1210 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms