RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 PRKD2Q9BZL6 878 aa24.32■■□□□ 1.48
GPCPD1-206ENST00000481690 SLC38A7Q9NVC3 462 aa24.32■■□□□ 1.48
GPCPD1-206ENST00000481690 FBXW11Q9UKB1 542 aa24.32■■□□□ 1.48
GPCPD1-206ENST00000481690 ABLIM1O14639 778 aa24.31■■□□□ 1.48
GPCPD1-206ENST00000481690 ZMYND10O75800 440 aa24.31■■□□□ 1.48
GPCPD1-206ENST00000481690 MAPTP10636 758 aaKnown RBP24.31■■□□□ 1.48
GPCPD1-206ENST00000481690 GRIN1Q05586 938 aa24.31■■□□□ 1.48
GPCPD1-206ENST00000481690 CUL4AQ13619 759 aa24.31■■□□□ 1.48
GPCPD1-206ENST00000481690 NOLC1Q14978 699 aaKnown RBP eCLIP24.31■■□□□ 1.48
GPCPD1-206ENST00000481690 UPP1Q16831 310 aa24.31■■□□□ 1.48
GPCPD1-206ENST00000481690 GPBP1Q86WP2 473 aa24.31■■□□□ 1.48
GPCPD1-206ENST00000481690 PRSS33Q8NF86 280 aa24.31■■□□□ 1.48
GPCPD1-206ENST00000481690 BICD1Q96G01 975 aa24.31■■□□□ 1.48
GPCPD1-206ENST00000481690 LARSQ9P2J5 1176 aaKnown RBP24.31■■□□□ 1.48
GPCPD1-206ENST00000481690 I3L4J1 428 aa24.3■■□□□ 1.48
GPCPD1-206ENST00000481690 ADAM12O43184 909 aa24.3■■□□□ 1.48
GPCPD1-206ENST00000481690 SLC26A4O43511 780 aa24.3■■□□□ 1.48
GPCPD1-206ENST00000481690 TRAPPC3O43617 180 aa24.3■■□□□ 1.48
GPCPD1-206ENST00000481690 N4BP1O75113 896 aaKnown RBP24.3■■□□□ 1.48
GPCPD1-206ENST00000481690 TOM1L1O75674 476 aa24.3■■□□□ 1.48
GPCPD1-206ENST00000481690 FGFR3P22607 806 aa24.3■■□□□ 1.48
GPCPD1-206ENST00000481690 BRCC3P46736 316 aa24.3■■□□□ 1.48
GPCPD1-206ENST00000481690 SEZ6Q53EL9 994 aa24.3■■□□□ 1.48
GPCPD1-206ENST00000481690 ARSHQ5FYA8 562 aa24.3■■□□□ 1.48
GPCPD1-206ENST00000481690 ALKAL1Q6UXT8 129 aa24.3■■□□□ 1.48
GPCPD1-206ENST00000481690 GET4Q7L5D6 327 aaPredicted RBP24.3■■□□□ 1.48
GPCPD1-206ENST00000481690 C3orf58Q8NDZ4 430 aa24.3■■□□□ 1.48
GPCPD1-206ENST00000481690 ZMAT2Q96NC0 199 aaKnown RBP24.3■■□□□ 1.48
GPCPD1-206ENST00000481690 REEP2Q9BRK0 252 aa24.3■■□□□ 1.48
GPCPD1-206ENST00000481690 KCNK12Q9HB15 430 aa24.3■■□□□ 1.48
GPCPD1-206ENST00000481690 H0YCG3 227 aa24.29■■□□□ 1.48
GPCPD1-206ENST00000481690 PODXLO00592 558 aa24.29■■□□□ 1.48
GPCPD1-206ENST00000481690 PLCG1P19174 1290 aa24.29■■□□□ 1.48
GPCPD1-206ENST00000481690 PDCP20941 246 aa24.29■■□□□ 1.48
GPCPD1-206ENST00000481690 TKTP29401 623 aaKnown RBP24.29■■□□□ 1.48
GPCPD1-206ENST00000481690 LONP1P36776 959 aaKnown RBP24.29■■□□□ 1.48
GPCPD1-206ENST00000481690 TDGQ13569 410 aa24.29■■□□□ 1.48
GPCPD1-206ENST00000481690 KARSQ15046 597 aaKnown RBP24.29■■□□□ 1.48
GPCPD1-206ENST00000481690 XKR4Q5GH76 650 aa24.29■■□□□ 1.48
GPCPD1-206ENST00000481690 PPM1LQ5SGD2 360 aa24.29■■□□□ 1.48
GPCPD1-206ENST00000481690 CD300LGQ6UXG3 332 aa24.29■■□□□ 1.48
GPCPD1-206ENST00000481690 DDX27Q96GQ7 796 aaKnown RBP24.29■■□□□ 1.48
GPCPD1-206ENST00000481690 MYADMQ96S97 322 aa24.29■■□□□ 1.48
GPCPD1-206ENST00000481690 ODF2LQ9ULJ1 636 aa24.29■■□□□ 1.48
GPCPD1-206ENST00000481690 FAM13AO94988 1023 aa24.28■■□□□ 1.48
GPCPD1-206ENST00000481690 KRT18P05783 430 aaKnown RBP24.28■■□□□ 1.48
GPCPD1-206ENST00000481690 C8AP07357 584 aa24.28■■□□□ 1.48
GPCPD1-206ENST00000481690 AVPR2P30518 371 aa24.28■■□□□ 1.48
GPCPD1-206ENST00000481690 OR1D2P34982 312 aa24.28■■□□□ 1.48
GPCPD1-206ENST00000481690 MCM6Q14566 821 aa24.28■■□□□ 1.48
GPCPD1-206ENST00000481690 ZPBP2Q6X784 338 aa24.28■■□□□ 1.48
GPCPD1-206ENST00000481690 LRRC15Q8TF66 581 aa24.28■■□□□ 1.48
GPCPD1-206ENST00000481690 C18orf25Q96B23 403 aaPredicted RBP24.28■■□□□ 1.48
GPCPD1-206ENST00000481690 PRRX2Q99811 253 aa24.28■■□□□ 1.48
GPCPD1-206ENST00000481690 MFSD1Q9H3U5 465 aa24.28■■□□□ 1.48
GPCPD1-206ENST00000481690 ZHX3Q9H4I2 956 aa24.28■■□□□ 1.48
GPCPD1-206ENST00000481690 CNTN3Q9P232 1028 aa24.28■■□□□ 1.48
GPCPD1-206ENST00000481690 MTRRQ9UBK8 725 aa24.28■■□□□ 1.48
GPCPD1-206ENST00000481690 CDY1Q9Y6F8 540 aa24.28■■□□□ 1.48
GPCPD1-206ENST00000481690 K7ENM7 598 aa24.27■■□□□ 1.48
GPCPD1-206ENST00000481690 CLDN3O15551 220 aa24.27■■□□□ 1.48
GPCPD1-206ENST00000481690 KCNE1P15382 129 aa24.27■■□□□ 1.48
GPCPD1-206ENST00000481690 NCKAP1LP55160 1127 aa24.27■■□□□ 1.48
GPCPD1-206ENST00000481690 HAUS6Q7Z4H7 955 aa24.27■■□□□ 1.48
GPCPD1-206ENST00000481690 ALYREFQ86V81 257 aaKnown RBP24.27■■□□□ 1.48
GPCPD1-206ENST00000481690 MYCT1Q8N699 235 aa24.27■■□□□ 1.48
GPCPD1-206ENST00000481690 SLC7A14Q8TBB6 771 aa24.27■■□□□ 1.48
GPCPD1-206ENST00000481690 BLOC1S4Q9NUP1 217 aa24.27■■□□□ 1.48
GPCPD1-206ENST00000481690 IGSF9Q9P2J2 1179 aa24.27■■□□□ 1.48
GPCPD1-206ENST00000481690 POLIQ9UNA4 740 aa24.27■■□□□ 1.48
GPCPD1-206ENST00000481690 NUB1Q9Y5A7 615 aa24.27■■□□□ 1.48
GPCPD1-206ENST00000481690 CCL16O15467 120 aa24.26■■□□□ 1.47
GPCPD1-206ENST00000481690 MEFVO15553 781 aaPredicted RBP24.26■■□□□ 1.47
GPCPD1-206ENST00000481690 PAPLNO95428 1278 aa24.26■■□□□ 1.47
GPCPD1-206ENST00000481690 PTPN5P54829 565 aa24.26■■□□□ 1.47
GPCPD1-206ENST00000481690 ANKS3Q6ZW76 656 aa24.26■■□□□ 1.47
GPCPD1-206ENST00000481690 GRASPQ7Z6J2 395 aaPredicted RBP24.26■■□□□ 1.47
GPCPD1-206ENST00000481690 RSAD2Q8WXG1 361 aa24.26■■□□□ 1.47
GPCPD1-206ENST00000481690 RAD54LQ92698 747 aa24.26■■□□□ 1.47
GPCPD1-206ENST00000481690 EPS15L1Q9UBC2 864 aa24.26■■□□□ 1.47
GPCPD1-206ENST00000481690 FBXL21Q9UKT6 434 aa24.26■■□□□ 1.47
GPCPD1-206ENST00000481690 DUSP12Q9UNI6 340 aa24.26■■□□□ 1.47
GPCPD1-206ENST00000481690 CLIC4Q9Y696 253 aa24.26■■□□□ 1.47
GPCPD1-206ENST00000481690 TBCAO75347 108 aaKnown RBP24.25■■□□□ 1.47
GPCPD1-206ENST00000481690 HNRNPA1P09651 372 aaKnown RBP eCLIP24.25■■□□□ 1.47
GPCPD1-206ENST00000481690 CXCL8P10145 99 aa24.25■■□□□ 1.47
GPCPD1-206ENST00000481690 FSHRP23945 695 aa24.25■■□□□ 1.47
GPCPD1-206ENST00000481690 LIG4P49917 911 aa24.25■■□□□ 1.47
GPCPD1-206ENST00000481690 MCL1Q07820 350 aa24.25■■□□□ 1.47
GPCPD1-206ENST00000481690 RAB33AQ14088 237 aa24.25■■□□□ 1.47
GPCPD1-206ENST00000481690 SLC10A6Q3KNW5 377 aa24.25■■□□□ 1.47
GPCPD1-206ENST00000481690 AXDND1Q5T1B0 1012 aaPredicted RBP24.25■■□□□ 1.47
GPCPD1-206ENST00000481690 RSPO2Q6UXX9 243 aaPredicted RBP24.25■■□□□ 1.47
GPCPD1-206ENST00000481690 PARVGQ9HBI0 331 aa24.25■■□□□ 1.47
GPCPD1-206ENST00000481690 FOXD4L1Q9NU39 408 aa24.25■■□□□ 1.47
GPCPD1-206ENST00000481690 HNRNPDLO14979 420 aaKnown RBP24.24■■□□□ 1.47
GPCPD1-206ENST00000481690 XYLBO75191 536 aa24.24■■□□□ 1.47
GPCPD1-206ENST00000481690 MARCKSP29966 332 aaPredicted RBP24.24■■□□□ 1.47
GPCPD1-206ENST00000481690 NTHL1P78549 312 aa24.24■■□□□ 1.47
GPCPD1-206ENST00000481690 SPECC1Q5M775 1068 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms