RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 HNRNPDLO14979 420 aaKnown RBP12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 POLR2DO15514 142 aaKnown RBP12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 CLDN3O15551 220 aa12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 TADA2AO75478 443 aa12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 IDEP14735 1019 aa12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 ADSSP30520 456 aa12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 HOXD13P35453 343 aa12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 TXLNAP40222 546 aa12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 MATR3P43243 847 aaKnown RBP eCLIP12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 GLUD2P49448 558 aa12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 ACOT2P49753 483 aa12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 LIG4P49917 911 aa12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 CLCN4P51793 760 aa12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 DSG1Q02413 1049 aa12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 UPP1Q16831 310 aa12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 FAM171A1Q5VUB5 890 aa12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 PALB2Q86YC2 1186 aa12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 KCNN1Q92952 543 aa12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 MRPL17Q9NRX2 175 aaKnown RBP12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 KBTBD4Q9NVX7 518 aa12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 CNTN3Q9P232 1028 aa12.46□□□□□ -0.41
RAPGEF1-207ENST00000481260 PLXNA3P51805 1871 aa12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 A0A1B0GVL5 298 aa12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 TTC26A0AVF1 554 aa12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 C19orf67A6NJJ6 358 aa12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 PRPF6O94906 941 aaKnown RBP12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 URODP06132 367 aa12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 KCNE1P15382 129 aa12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 KLRC2P26717 231 aa12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 TKTP29401 623 aaKnown RBP12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 CUL4BQ13620 913 aa12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 HERC4Q5GLZ8 1057 aaPredicted RBP12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 CRELD2Q6UXH1 353 aaPredicted RBP12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 TMC5Q6UXY8 1006 aa12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 CEP57Q86XR8 500 aa12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 GJD3Q8N144 294 aa12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 KCNG4Q8TDN1 519 aa12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 MSTO1Q9BUK6 570 aa12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 GOLPH3LQ9H4A5 285 aa12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 MRPL44Q9H9J2 332 aaKnown RBP12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 RXFP1Q9HBX9 757 aa12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 PANK4Q9NVE7 773 aa12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 SERTAD1Q9UHV2 236 aa12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 VWA8A3KMH1 1905 aa12.45□□□□□ -0.42
RAPGEF1-207ENST00000481260 FAM86C2PA6NEL3 165 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 PODXLO00592 558 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 ACTN4O43707 911 aaKnown RBP12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 RFPL2O75678 378 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 B3GAT3O94766 335 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 GCNT3O95395 438 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 NFICP08651 508 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 PFKFB1P16118 471 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 SSTR3P32745 418 aaPredicted RBP12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 AFMP43652 599 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 YARSP54577 528 aaKnown RBP12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 USP41Q3LFD5 358 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 ADHFE1Q8IWW8 467 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 LNX1Q8TBB1 728 aaPredicted RBP12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 CASP10Q92851 521 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 FAM212AQ96EL1 285 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 SAAL1Q96ER3 474 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 RPGRIP1Q96KN7 1286 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 FBXL18Q96ME1 805 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 CLSTN3Q9BQT9 956 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 TRIM9Q9C026 710 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 ST6GALNAC4Q9H4F1 302 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 POMKQ9H5K3 350 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 C11orf16Q9NQ32 467 aa12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 CPSF3Q9UKF6 684 aaKnown RBP12.44□□□□□ -0.42
RAPGEF1-207ENST00000481260 SF3B1O75533 1304 aaKnown RBP eCLIP12.43□□□□□ -0.422e-8■■■■■ 40.2
RAPGEF1-207ENST00000481260 GOLGA8IPA6NC78 632 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 GOLGA8JA6NMD2 632 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 OGTO15294 1046 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 TGM5O43548 720 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 NR1I2O75469 434 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 CLTAP09496 248 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 PRR29P0C7W0 189 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 GAP43P17677 238 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 CDR1P51861 262 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 ZBTB6Q15916 424 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 PUS10Q3MIT2 529 aaKnown RBP12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 L1TD1Q5T7N2 865 aaKnown RBP12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 JADE1Q6IE81 842 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 KIAA1841Q6NSI8 718 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 DCLRE1AQ6PJP8 1040 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 KIF12Q96FN5 646 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 CBWD1Q9BRT8 395 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 TTPALQ9BTX7 342 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 EMILIN2Q9BXX0 1053 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 PCIF1Q9H4Z3 704 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 MAN1C1Q9NR34 630 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 TOPORSQ9NS56 1045 aaPredicted RBP12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 RAPGEFL1Q9UHV5 662 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 KCNH3Q9ULD8 1083 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 STYXL1Q9Y6J8 313 aa12.43□□□□□ -0.42
RAPGEF1-207ENST00000481260 H0YCG3 227 aa12.42□□□□□ -0.42
RAPGEF1-207ENST00000481260 SPTLC1O15269 473 aa12.42□□□□□ -0.42
RAPGEF1-207ENST00000481260 FGFR3P22607 806 aa12.42□□□□□ -0.42
RAPGEF1-207ENST00000481260 NDUFA8P51970 172 aa12.42□□□□□ -0.42
RAPGEF1-207ENST00000481260 ASIC1P78348 528 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms