RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 SNX27Q96L92 541 aa7.33□□□□□ -1.24
FN1-220ENST00000480024 DRC1Q96MC2 740 aa7.33□□□□□ -1.24
FN1-220ENST00000480024 PLIN2Q99541 437 aa7.33□□□□□ -1.24
FN1-220ENST00000480024 ACO2Q99798 780 aaKnown RBP7.33□□□□□ -1.24
FN1-220ENST00000480024 CCDC94Q9BW85 323 aaPredicted RBP7.33□□□□□ -1.24
FN1-220ENST00000480024 TARS2Q9BW92 718 aaKnown RBP7.33□□□□□ -1.24
FN1-220ENST00000480024 MRPL4Q9BYD3 311 aaKnown RBP7.33□□□□□ -1.24
FN1-220ENST00000480024 IRF2BPLQ9H1B7 796 aa7.33□□□□□ -1.24
FN1-220ENST00000480024 KMT5AQ9NQR1 393 aa7.33□□□□□ -1.24
FN1-220ENST00000480024 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.33□□□□□ -1.24
FN1-220ENST00000480024 TOPORSQ9NS56 1045 aaPredicted RBP7.33□□□□□ -1.24
FN1-220ENST00000480024 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.33□□□□□ -1.24
FN1-220ENST00000480024 ARHGAP28Q9P2N2 729 aa7.33□□□□□ -1.24
FN1-220ENST00000480024 MTRRQ9UBK8 725 aa7.33□□□□□ -1.24
FN1-220ENST00000480024 KIF3AQ9Y496 699 aa7.33□□□□□ -1.24
FN1-220ENST00000480024 CDY1Q9Y6F8 540 aa7.33□□□□□ -1.24
FN1-220ENST00000480024 NUMBLQ9Y6R0 609 aa7.33□□□□□ -1.24
FN1-220ENST00000480024 NOTCH4Q99466 2003 aa7.33□□□□□ -1.24
FN1-220ENST00000480024 MIA3Q5JRA6 1907 aa7.33□□□□□ -1.24
FN1-220ENST00000480024 COL4A3Q01955 1670 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 ZNF292O60281 2723 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 SMIM28A0A1B0GU29 152 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 KRBA1A5PL33 1030 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 VWA3AA6NCI4 1184 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 SFI1A8K8P3 1242 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 H3BQV1 296 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 PODXLO00592 558 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 TRAPPC3O43617 180 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 XYLBO75191 536 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 CD2BP2O95400 341 aaKnown RBP7.32□□□□□ -1.24
FN1-220ENST00000480024 PAPLNO95428 1278 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 C1RP00736 705 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 HNRNPA1P09651 372 aaKnown RBP eCLIP7.32□□□□□ -1.24
FN1-220ENST00000480024 MCF2P10911 925 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 SRFP11831 508 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 FGFR3P22607 806 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 GJB2P29033 226 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 ATP2C1P98194 919 aaPredicted RBP7.32□□□□□ -1.24
FN1-220ENST00000480024 NOLC1Q14978 699 aaKnown RBP eCLIP7.32□□□□□ -1.242e-59■■□□□ 11.7
FN1-220ENST00000480024 UPP1Q16831 310 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 SEZ6Q53EL9 994 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 RILPL1Q5EBL4 403 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 AXDND1Q5T1B0 1012 aaPredicted RBP7.32□□□□□ -1.24
FN1-220ENST00000480024 RINT1Q6NUQ1 792 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 MPZL3Q6UWV2 235 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 CD300LGQ6UXG3 332 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 RSPO2Q6UXX9 243 aaPredicted RBP7.32□□□□□ -1.24
FN1-220ENST00000480024 C1orf186Q6ZWK4 172 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 FRMD5Q7Z6J6 570 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 CCDC105Q8IYK2 499 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 SLC44A3Q8N4M1 653 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 GPR152Q8TDT2 470 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 ING5Q8WYH8 240 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 C18orf25Q96B23 403 aaPredicted RBP7.32□□□□□ -1.24
FN1-220ENST00000480024 CDK5RAP3Q96JB5 506 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 TMX3Q96JJ7 454 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 UROC1Q96N76 676 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 ZMAT2Q96NC0 199 aaKnown RBP7.32□□□□□ -1.24
FN1-220ENST00000480024 PNMA5Q96PV4 448 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 TCHPQ9BT92 498 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 TBC1D17Q9HA65 648 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 PTPRHQ9HD43 1115 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 ARHGEF3Q9NR81 526 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 SLC38A7Q9NVC3 462 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 HCFC1R1Q9NWW0 138 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 WNT16Q9UBV4 365 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 CDH7Q9ULB5 785 aa7.32□□□□□ -1.24
FN1-220ENST00000480024 CACNA1IQ9P0X4 2223 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 NPHP3-ACAD11A0A0J9YXS1 232 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 ANHXE9PGG2 379 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 ABLIM1O14639 778 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 MEFVO15553 781 aaPredicted RBP7.31□□□□□ -1.24
FN1-220ENST00000480024 PLS3P13797 630 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 PROZP22891 400 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 GUCY2CP25092 1073 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 HOXA9P31269 272 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 MATR3P43243 847 aaKnown RBP eCLIP7.31□□□□□ -1.24
FN1-220ENST00000480024 ARPP19P56211 112 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 ROR1Q01973 937 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 STRN3Q13033 797 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 RAB33AQ14088 237 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 ANGPT1Q15389 498 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 PABPC1LQ4VXU2 614 aaKnown RBP7.31□□□□□ -1.24
FN1-220ENST00000480024 SPECC1Q5M775 1068 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 DCLRE1AQ6PJP8 1040 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 PARM1Q6UWI2 310 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 ALKAL1Q6UXT8 129 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 ANKS3Q6ZW76 656 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 ASCL5Q7RTU5 278 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 TMEM130Q8N3G9 435 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 DTWD2Q8NBA8 298 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 ITFG1Q8TB96 612 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 FGF13Q92913 245 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 FGF14Q92915 247 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 NXPE3Q969Y0 559 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 ZBTB45Q96K62 511 aaPredicted RBP7.31□□□□□ -1.24
FN1-220ENST00000480024 ACAP3Q96P50 834 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 KXD1Q9BQD3 176 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 RTP3Q9BQQ7 232 aa7.31□□□□□ -1.24
FN1-220ENST00000480024 RPP25Q9BUL9 199 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms