RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 GAS8O95995 478 aa26.3■■□□□ 1.8
SYNGAP1-206ENST00000479510 KRT5P13647 590 aa26.3■■□□□ 1.8
SYNGAP1-206ENST00000479510 CCND2P30279 289 aa26.3■■□□□ 1.8
SYNGAP1-206ENST00000479510 KCNJ1P48048 391 aa26.3■■□□□ 1.8
SYNGAP1-206ENST00000479510 KRT17Q04695 432 aa26.3■■□□□ 1.8
SYNGAP1-206ENST00000479510 PPP1R2P3Q6NXS1 205 aa26.3■■□□□ 1.8
SYNGAP1-206ENST00000479510 CCDC50Q8IVM0 306 aa26.3■■□□□ 1.8
SYNGAP1-206ENST00000479510 EPS8L3Q8TE67 593 aaKnown RBP26.3■■□□□ 1.8
SYNGAP1-206ENST00000479510 ZNRF3Q9ULT6 936 aa26.3■■□□□ 1.8
SYNGAP1-206ENST00000479510 CPNE8Q86YQ8 564 aa26.29■■□□□ 1.8
SYNGAP1-206ENST00000479510 BSNDQ8WZ55 320 aa26.29■■□□□ 1.8
SYNGAP1-206ENST00000479510 SLC40A1Q9NP59 571 aa26.29■■□□□ 1.8
SYNGAP1-206ENST00000479510 PDLIM7Q9NR12 457 aa26.29■■□□□ 1.8
SYNGAP1-206ENST00000479510 TOPORSQ9NS56 1045 aaPredicted RBP26.29■■□□□ 1.8
SYNGAP1-206ENST00000479510 HOMER2Q9NSB8 354 aa26.29■■□□□ 1.8
SYNGAP1-206ENST00000479510 CCT8L1PA6NM43 557 aa26.29■■□□□ 1.8
SYNGAP1-206ENST00000479510 TCEA3O75764 348 aa26.29■■□□□ 1.8
SYNGAP1-206ENST00000479510 DNAJC8O75937 253 aaPredicted RBP26.29■■□□□ 1.8
SYNGAP1-206ENST00000479510 GSTA1P08263 222 aa26.29■■□□□ 1.8
SYNGAP1-206ENST00000479510 SCTRP47872 440 aa26.29■■□□□ 1.8
SYNGAP1-206ENST00000479510 MNAT1P51948 309 aa26.29■■□□□ 1.8
SYNGAP1-206ENST00000479510 NSMFQ6X4W1 530 aa26.29■■□□□ 1.8
SYNGAP1-206ENST00000479510 TRIM72Q6ZMU5 477 aa26.29■■□□□ 1.8
SYNGAP1-206ENST00000479510 VSIG10LQ86VR7 867 aa26.29■■□□□ 1.8
SYNGAP1-206ENST00000479510 CEP170P1Q96L14 293 aa26.29■■□□□ 1.8
SYNGAP1-206ENST00000479510 KIFC3Q9BVG8 833 aa26.29■■□□□ 1.8
SYNGAP1-206ENST00000479510 DNM1LO00429 736 aa26.28■■□□□ 1.8
SYNGAP1-206ENST00000479510 STBD1O95210 358 aa26.28■■□□□ 1.8
SYNGAP1-206ENST00000479510 DLATP10515 647 aaKnown RBP26.28■■□□□ 1.8
SYNGAP1-206ENST00000479510 BBOF1Q8ND07 529 aa26.28■■□□□ 1.8
SYNGAP1-206ENST00000479510 CDC42EP4Q9H3Q1 356 aaKnown RBP26.28■■□□□ 1.8
SYNGAP1-206ENST00000479510 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.28■■□□□ 1.8
SYNGAP1-206ENST00000479510 TESPA1A2RU30 521 aaPredicted RBP26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 HNRNPDLO14979 420 aaKnown RBP26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 TP73O15350 636 aa26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 XRCC4Q13426 336 aa26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 AAASQ9NRG9 546 aa26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 SAMD15Q9P1V8 674 aa26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 MYPNQ86TC9 1320 aa26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 SMIM23A6NLE4 172 aa26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 EXTL3O43909 919 aa26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 CYP1A1P04798 512 aaPredicted RBP26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 IVDP26440 423 aa26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 PSMD6Q15008 389 aa26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 CNGA2Q16280 664 aa26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 WDR44Q5JSH3 913 aa26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 ATL2Q8NHH9 583 aa26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 VCPIP1Q96JH7 1222 aa26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 IFT74Q96LB3 600 aa26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 DCLK3Q9C098 648 aa26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 ARHGAP28Q9P2N2 729 aa26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 ASIC3Q9UHC3 531 aa26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 ZNFX1Q9P2E3 1918 aaKnown RBP26.27■■□□□ 1.8
SYNGAP1-206ENST00000479510 NFASCO94856 1347 aa26.26■■□□□ 1.8
SYNGAP1-206ENST00000479510 MROH7Q68CQ1 1323 aa26.26■■□□□ 1.8
SYNGAP1-206ENST00000479510 COL4A5P29400 1685 aa26.26■■□□□ 1.79
SYNGAP1-206ENST00000479510 WNT10BO00744 389 aa26.26■■□□□ 1.79
SYNGAP1-206ENST00000479510 PSTPIP1O43586 416 aa26.26■■□□□ 1.79
SYNGAP1-206ENST00000479510 SORBS3O60504 671 aa26.26■■□□□ 1.79
SYNGAP1-206ENST00000479510 PSAPP07602 524 aa26.26■■□□□ 1.79
SYNGAP1-206ENST00000479510 C1orf54Q8WWF1 131 aa26.26■■□□□ 1.79
SYNGAP1-206ENST00000479510 DDX27Q96GQ7 796 aaKnown RBP26.26■■□□□ 1.79
SYNGAP1-206ENST00000479510 TRAIPQ9BWF2 469 aa26.26■■□□□ 1.79
SYNGAP1-206ENST00000479510 GABBR1Q9UBS5 961 aa26.26■■□□□ 1.79
SYNGAP1-206ENST00000479510 PROSCO94903 275 aa26.26■■□□□ 1.79
SYNGAP1-206ENST00000479510 CEP128Q6ZU80 1094 aa26.26■■□□□ 1.79
SYNGAP1-206ENST00000479510 ZNF277Q9NRM2 450 aaPredicted RBP26.26■■□□□ 1.79
SYNGAP1-206ENST00000479510 CHUKO15111 745 aa26.25■■□□□ 1.79
SYNGAP1-206ENST00000479510 TTC4O95801 387 aa26.25■■□□□ 1.79
SYNGAP1-206ENST00000479510 NSFP46459 744 aaKnown RBP26.25■■□□□ 1.79
SYNGAP1-206ENST00000479510 LIN9Q5TKA1 542 aa26.25■■□□□ 1.79
SYNGAP1-206ENST00000479510 CCDC25Q86WR0 208 aa26.25■■□□□ 1.79
SYNGAP1-206ENST00000479510 NIM1KQ8IY84 436 aa26.25■■□□□ 1.79
SYNGAP1-206ENST00000479510 LRRC34Q8IZ02 419 aa26.25■■□□□ 1.79
SYNGAP1-206ENST00000479510 CDHR1Q96JP9 859 aa26.25■■□□□ 1.79
SYNGAP1-206ENST00000479510 ATP6V0A4Q9HBG4 840 aa26.25■■□□□ 1.79
SYNGAP1-206ENST00000479510 STYXL1Q9Y6J8 313 aa26.25■■□□□ 1.79
SYNGAP1-206ENST00000479510 ZNF862O60290 1169 aa26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 PPARDQ03181 441 aa26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 TNFAIP1Q13829 316 aa26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 ZACNQ401N2 412 aa26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 TBC1D10BQ4KMP7 808 aaPredicted RBP26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 EXOC3L1Q86VI1 746 aa26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 RELL1Q8IUW5 271 aa26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 SGSM3Q96HU1 749 aa26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 PRMT1Q99873 361 aaKnown RBP26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 FAM213AQ9BRX8 229 aa26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 FOXP3Q9BZS1 431 aa26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 MAF1Q9H063 256 aa26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 NR3C2P08235 984 aa26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 ATF2P15336 505 aa26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 SLCO1A2P46721 670 aa26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 MON1BQ7L1V2 547 aa26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 BICD1Q96G01 975 aa26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 JPH2Q9BR39 696 aaPredicted RBP26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 MRPL47Q9HD33 250 aaKnown RBP26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 CHST7Q9NS84 486 aa26.24■■□□□ 1.79
SYNGAP1-206ENST00000479510 ADGRA3Q8IWK6 1321 aa26.23■■□□□ 1.79
SYNGAP1-206ENST00000479510 VWA5AO00534 786 aa26.23■■□□□ 1.79
SYNGAP1-206ENST00000479510 POTEJP0CG39 1038 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms