RNA–Protein interactions for RNA: ENST00000478798.1

BCCIP-205, Transcript of BRCA2 and CDKN1A interacting protein, human

TSL 2

Gene BCCIP, Length 1,461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCCIP-205	ENST00000478798	PDC	P20941	246 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	SREBF1	P36956	1147 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	RPS19	P39019	145 aa	Known RBP	4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	FXR1	P51114	621 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	NPEPPS	P55786	919 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	IL10RA	Q13651	578 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	GTF2H3	Q13889	308 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	HSP90AB3P	Q58FF7	597 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	LILRA6	Q6PI73	481 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	USP45	Q70EL2	814 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	RHOT1	Q8IXI2	618 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	TRMT2A	Q8IZ69	625 aa	Known RBP	4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	REPS2	Q8NFH8	660 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	MDM1	Q8TC05	714 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	KAT5	Q92993	513 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	CLIP3	Q96DZ5	547 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	OR14A2	Q96R54	314 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	TCF25	Q9BQ70	676 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	PDCD2L	Q9BRP1	358 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	SLC12A5	Q9H2X9	1139 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	NELFA	Q9H3P2	528 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	MANSC1	Q9H8J5	431 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	LANCL2	Q9NS86	450 aa		4.97	□□□□□ -1.61
BCCIP-205	ENST00000478798	NPEPPSL1	A6NEC2	478 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	KIF3B	O15066	747 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	OFD1	O75665	1012 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	LDHA	P00338	332 aa	Known RBP	4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	HSPA6	P17066	643 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	LPO	P22079	712 aa	Predicted RBP	4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	ANP32A	P39687	249 aa	Known RBP	4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	SSR1	P43307	286 aa	Known RBP	4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	IRX3	P78415	501 aa	Predicted RBP	4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	ZNF267	Q14586	743 aa	Predicted RBP	4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	KCTD2	Q14681	263 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	VPS72	Q15906	364 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	PRAMEF14	Q5SWL7	426 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	RPAIN	Q86UA6	219 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	EGFL6	Q8IUX8	553 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	PRR18	Q8N4B5	295 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	GIMAP8	Q8ND71	665 aa	Predicted RBP	4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	CCHCR1	Q8TD31	782 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	RAB24	Q969Q5	203 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	ARL8A	Q96BM9	186 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	LDAH	Q9H6V9	325 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	CASS4	Q9NQ75	786 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	ANLN	Q9NQW6	1124 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	RTEL1	Q9NZ71	1219 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	NOL7	Q9UMY1	257 aa	Known RBP	4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	PCDHA13	Q9Y5I0	950 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	CFAP20	Q9Y6A4	193 aa	Known RBP	4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	CCDC88B	A6NC98	1476 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	GLI2	P10070	1586 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	KIF21B	O75037	1637 aa		4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	PRG4	Q92954	1404 aa	Predicted RBP	4.96	□□□□□ -1.62
BCCIP-205	ENST00000478798	ZMYM3	Q14202	1370 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	IFRD1	O00458	451 aa	Predicted RBP	4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	NPHP1	O15259	732 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	GPR42	O15529	346 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	SGTA	O43765	313 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	FOS	P01100	380 aa	Predicted RBP	4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	FGA	P02671	866 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	ATF3	P18847	181 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	HOXA5	P20719	270 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	GUCY1A2	P33402	732 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	PTPN7	P35236	360 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	PEX19	P40855	299 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	GZMK	P49863	264 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	CDC42EP1	Q00587	391 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	MTA1	Q13330	715 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	GRM7	Q14831	915 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	BRD3	Q15059	726 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	ATAT1	Q5SQI0	421 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	PPP4R3A	Q6IN85	833 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	PDZD4	Q76G19	769 aa	Predicted RBP	4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	LIMS2	Q7Z4I7	341 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	CIR1	Q86X95	450 aa	Predicted RBP	4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	SAMD3	Q8N6K7	520 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	FBXO18	Q8NFZ0	1043 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	SVIP	Q8NHG7	77 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	HPS3	Q969F9	1004 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	TMEM176A	Q96HP8	235 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	TDP1	Q9NUW8	608 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	SLC30A1	Q9Y6M5	507 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	ADAMTSL3	P82987	1691 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	PTPRM	P28827	1452 aa		4.95	□□□□□ -1.62
BCCIP-205	ENST00000478798	AP1G1	O43747	822 aa		4.94	□□□□□ -1.62
BCCIP-205	ENST00000478798	RRP9	O43818	475 aa	Known RBP	4.94	□□□□□ -1.62
BCCIP-205	ENST00000478798	GPR32	O75388	356 aa		4.94	□□□□□ -1.62
BCCIP-205	ENST00000478798	STC2	O76061	302 aa		4.94	□□□□□ -1.62
BCCIP-205	ENST00000478798	APBA1	Q02410	837 aa		4.94	□□□□□ -1.62
BCCIP-205	ENST00000478798	PGS1	Q32NB8	556 aa		4.94	□□□□□ -1.62
BCCIP-205	ENST00000478798	MAP9	Q49MG5	647 aa		4.94	□□□□□ -1.62
BCCIP-205	ENST00000478798	MINDY4	Q4G0A6	757 aa		4.94	□□□□□ -1.62
BCCIP-205	ENST00000478798	TCTN3	Q6NUS6	607 aa		4.94	□□□□□ -1.62
BCCIP-205	ENST00000478798	GLB1L	Q6UWU2	654 aa		4.94	□□□□□ -1.62
BCCIP-205	ENST00000478798	B3GNT9	Q6UX72	402 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms