RNA–Protein interactions for RNA: ENST00000478798.1

BCCIP-205, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 2

Gene BCCIP, Length 1,461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-205ENST00000478798 AEBP2Q6ZN18 517 aaPredicted RBP19.04■□□□□ 0.64
BCCIP-205ENST00000478798 CHIC1Q5VXU3 224 aa18.48■□□□□ 0.55
BCCIP-205ENST00000478798 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
BCCIP-205ENST00000478798 PHF23Q9BUL5 403 aaPredicted RBP16.27■□□□□ 0.19
BCCIP-205ENST00000478798 POTEDQ86YR6 584 aa15.96■□□□□ 0.14
BCCIP-205ENST00000478798 FOXD1Q16676 465 aa15.37■□□□□ 0.05
BCCIP-205ENST00000478798 PLPPR3Q6T4P5 718 aa15.1■□□□□ 0.01
BCCIP-205ENST00000478798 MSH5O43196 834 aa14.65□□□□□ -0.06
BCCIP-205ENST00000478798 ADRA2BP18089 450 aa14.28□□□□□ -0.12
BCCIP-205ENST00000478798 PPP6R1Q9UPN7 881 aa14.28□□□□□ -0.12
BCCIP-205ENST00000478798 PIAS4Q8N2W9 510 aaPredicted RBP14.09□□□□□ -0.15
BCCIP-205ENST00000478798 PPP4R3CPQ6ZMV5 832 aa13.33□□□□□ -0.28
BCCIP-205ENST00000478798 KCNA4P22459 653 aa13.26□□□□□ -0.29
BCCIP-205ENST00000478798 CACNB1Q02641 598 aaPredicted RBP13.17□□□□□ -0.3
BCCIP-205ENST00000478798 SCAF1Q9H7N4 1312 aaKnown RBP13.06□□□□□ -0.32
BCCIP-205ENST00000478798 NCBP3Q53F19 620 aaKnown RBP13.03□□□□□ -0.32
BCCIP-205ENST00000478798 CNKSR2Q8WXI2 1034 aa12.91□□□□□ -0.34
BCCIP-205ENST00000478798 MAPK8IP2Q13387 824 aaPredicted RBP12.89□□□□□ -0.35
BCCIP-205ENST00000478798 NPM3O75607 178 aaKnown RBP12.86□□□□□ -0.35
BCCIP-205ENST00000478798 DMRT2Q9Y5R5 561 aa12.8□□□□□ -0.36
BCCIP-205ENST00000478798 SLC4A1APQ9BWU0 796 aaKnown RBP12.66□□□□□ -0.38
BCCIP-205ENST00000478798 RNF216Q9NWF9 866 aaPredicted RBP12.6□□□□□ -0.39
BCCIP-205ENST00000478798 EHMT2Q96KQ7 1210 aa12.55□□□□□ -0.4
BCCIP-205ENST00000478798 HOXD11P31277 338 aaPredicted RBP12.5□□□□□ -0.41
BCCIP-205ENST00000478798 RNF39Q9H2S5 420 aa12.46□□□□□ -0.41
BCCIP-205ENST00000478798 DNAJC5BQ9UF47 199 aa12.44□□□□□ -0.42
BCCIP-205ENST00000478798 DCAF8L1A6NGE4 600 aa12.32□□□□□ -0.44
BCCIP-205ENST00000478798 POTEHQ6S545 545 aa12.31□□□□□ -0.44
BCCIP-205ENST00000478798 CSRNP3Q8WYN3 585 aa12.3□□□□□ -0.44
BCCIP-205ENST00000478798 ZBTB22O15209 634 aa12.21□□□□□ -0.45
BCCIP-205ENST00000478798 C1QBPQ07021 282 aaKnown RBP12.2□□□□□ -0.46
BCCIP-205ENST00000478798 FOXD4L1Q9NU39 408 aa12.15□□□□□ -0.46
BCCIP-205ENST00000478798 SLC4A2P04920 1241 aa12.08□□□□□ -0.48
BCCIP-205ENST00000478798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.9□□□□□ -0.52e-7■■■□□ 16.3
BCCIP-205ENST00000478798 MYCNP04198 464 aaPredicted RBP11.89□□□□□ -0.51
BCCIP-205ENST00000478798 U3KPZ7 1027 aaPredicted RBP11.76□□□□□ -0.53
BCCIP-205ENST00000478798 ATXN8OSP0DMR3 200 aa11.69□□□□□ -0.54
BCCIP-205ENST00000478798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.67□□□□□ -0.54
BCCIP-205ENST00000478798 HNRNPUL2Q1KMD3 747 aaKnown RBP11.67□□□□□ -0.54
BCCIP-205ENST00000478798 SAMD1Q6SPF0 538 aaPredicted RBP11.63□□□□□ -0.55
BCCIP-205ENST00000478798 ATF5Q9Y2D1 282 aaPredicted RBP11.54□□□□□ -0.56
BCCIP-205ENST00000478798 APLP2Q06481 763 aa11.5□□□□□ -0.57
BCCIP-205ENST00000478798 DSG3P32926 999 aa11.37□□□□□ -0.59
BCCIP-205ENST00000478798 SPINK5Q9NQ38 1064 aaPredicted RBP11.36□□□□□ -0.59
BCCIP-205ENST00000478798 ZNF219Q9P2Y4 722 aaPredicted RBP11.32□□□□□ -0.6
BCCIP-205ENST00000478798 CAPN15O75808 1086 aa11.31□□□□□ -0.6
BCCIP-205ENST00000478798 TRHP20396 242 aaPredicted RBP11.31□□□□□ -0.6
BCCIP-205ENST00000478798 POLA2Q14181 598 aa11.15□□□□□ -0.62
BCCIP-205ENST00000478798 ABCB7O75027 752 aa11.12□□□□□ -0.63
BCCIP-205ENST00000478798 FKBP8Q14318 412 aa11.12□□□□□ -0.63
BCCIP-205ENST00000478798 SP7Q8TDD2 431 aaPredicted RBP11.08□□□□□ -0.64
BCCIP-205ENST00000478798 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
BCCIP-205ENST00000478798 FBLN2P98095 1184 aa11.04□□□□□ -0.64
BCCIP-205ENST00000478798 ZBTB12Q9Y330 459 aaPredicted RBP11□□□□□ -0.65
BCCIP-205ENST00000478798 CHRDL2Q6WN34 429 aa10.98□□□□□ -0.65
BCCIP-205ENST00000478798 SPDYE4A6NLX3 237 aa10.9□□□□□ -0.66
BCCIP-205ENST00000478798 OSCARQ8IYS5 282 aa10.8□□□□□ -0.68
BCCIP-205ENST00000478798 RBM42Q9BTD8 480 aaKnown RBP10.8□□□□□ -0.68
BCCIP-205ENST00000478798 PROM2Q8N271 834 aa10.75□□□□□ -0.69
BCCIP-205ENST00000478798 SPDYE2BA6NHP3 402 aa10.71□□□□□ -0.69
BCCIP-205ENST00000478798 SPDYE6P0CI01 402 aa10.71□□□□□ -0.69
BCCIP-205ENST00000478798 SPDYE2Q495Y8 402 aa10.71□□□□□ -0.69
BCCIP-205ENST00000478798 ZNF692Q9BU19 519 aaPredicted RBP10.7□□□□□ -0.7
BCCIP-205ENST00000478798 SSUH2Q9Y2M2 353 aa10.66□□□□□ -0.7
BCCIP-205ENST00000478798 FBXO3Q9UK99 471 aa10.65□□□□□ -0.7
BCCIP-205ENST00000478798 PLSCR2Q9NRY7 297 aa10.61□□□□□ -0.71
BCCIP-205ENST00000478798 HAX1O00165 279 aa10.59□□□□□ -0.71
BCCIP-205ENST00000478798 PABPN1Q86U42 306 aaKnown RBP eCLIP10.57□□□□□ -0.72
BCCIP-205ENST00000478798 PIP4P2Q8N4L2 257 aa10.55□□□□□ -0.72
BCCIP-205ENST00000478798 VASPP50552 380 aaPredicted RBP10.51□□□□□ -0.73
BCCIP-205ENST00000478798 AMER1Q5JTC6 1135 aaPredicted RBP10.49□□□□□ -0.73
BCCIP-205ENST00000478798 EVX2Q03828 476 aa10.47□□□□□ -0.73
BCCIP-205ENST00000478798 RTN4Q9NQC3 1192 aaKnown RBP10.47□□□□□ -0.73
BCCIP-205ENST00000478798 AKT1S1Q96B36 256 aa10.45□□□□□ -0.74
BCCIP-205ENST00000478798 STAG3Q9UJ98 1225 aa10.43□□□□□ -0.74
BCCIP-205ENST00000478798 LHX8Q68G74 356 aa10.4□□□□□ -0.74
BCCIP-205ENST00000478798 IFNLR1Q8IU57 520 aaPredicted RBP10.37□□□□□ -0.75
BCCIP-205ENST00000478798 REM2Q8IYK8 340 aaPredicted RBP10.35□□□□□ -0.75
BCCIP-205ENST00000478798 SPDYE1Q8NFV5 336 aaPredicted RBP10.35□□□□□ -0.75
BCCIP-205ENST00000478798 FXR2P51116 673 aaKnown RBP eCLIP10.33□□□□□ -0.76
BCCIP-205ENST00000478798 PLCD3Q8N3E9 789 aa10.32□□□□□ -0.76
BCCIP-205ENST00000478798 MIER1Q8N108 512 aa10.3□□□□□ -0.76
BCCIP-205ENST00000478798 CLEC11AQ9Y240 323 aa10.3□□□□□ -0.76
BCCIP-205ENST00000478798 KLHL34Q8N239 644 aa10.27□□□□□ -0.77
BCCIP-205ENST00000478798 PITPNM1O00562 1244 aa10.24□□□□□ -0.77
BCCIP-205ENST00000478798 PLEKHG5O94827 1062 aa10.24□□□□□ -0.77
BCCIP-205ENST00000478798 PRR29P0C7W0 189 aa10.23□□□□□ -0.77
BCCIP-205ENST00000478798 SPOCK2Q92563 424 aa10.22□□□□□ -0.77
BCCIP-205ENST00000478798 ZBTB47Q9UFB7 747 aaPredicted RBP10.19□□□□□ -0.78
BCCIP-205ENST00000478798 CREBZFQ9NS37 354 aa10.15□□□□□ -0.78
BCCIP-205ENST00000478798 GABBR2O75899 941 aa10.12□□□□□ -0.79
BCCIP-205ENST00000478798 PKD2Q13563 968 aa10.11□□□□□ -0.79
BCCIP-205ENST00000478798 MNX1P50219 401 aaPredicted RBP10.08□□□□□ -0.8
BCCIP-205ENST00000478798 C19orf67A6NJJ6 358 aa10.04□□□□□ -0.8
BCCIP-205ENST00000478798 CHADLQ6NUI6 762 aa10.04□□□□□ -0.8
BCCIP-205ENST00000478798 NUBP1P53384 320 aa10.03□□□□□ -0.8
BCCIP-205ENST00000478798 CIZ1Q9ULV3 898 aaPredicted RBP10.03□□□□□ -0.8
BCCIP-205ENST00000478798 ECM2O94769 699 aaPredicted RBP10.02□□□□□ -0.81
BCCIP-205ENST00000478798 PRKAR2AP13861 404 aaKnown RBP9.98□□□□□ -0.81
BCCIP-205ENST00000478798 NPM1P06748 294 aaKnown RBP eCLIP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 246 ms