RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 BRCC3P46736 316 aa25.01■■□□□ 1.59
C9orf3-216ENST00000478603 XKR4Q5GH76 650 aa25.01■■□□□ 1.59
C9orf3-216ENST00000478603 MPZL3Q6UWV2 235 aa25.01■■□□□ 1.59
C9orf3-216ENST00000478603 GET4Q7L5D6 327 aaPredicted RBP25.01■■□□□ 1.59
C9orf3-216ENST00000478603 TMEM161BQ8NDZ6 487 aa25.01■■□□□ 1.59
C9orf3-216ENST00000478603 SPIRE2Q8WWL2 714 aa25.01■■□□□ 1.59
C9orf3-216ENST00000478603 SNX27Q96L92 541 aa25.01■■□□□ 1.59
C9orf3-216ENST00000478603 ZMAT2Q96NC0 199 aaKnown RBP25.01■■□□□ 1.59
C9orf3-216ENST00000478603 ACAP3Q96P50 834 aa25.01■■□□□ 1.59
C9orf3-216ENST00000478603 DAXXQ9UER7 740 aaPredicted RBP25.01■■□□□ 1.59
C9orf3-216ENST00000478603 DUSP12Q9UNI6 340 aa25.01■■□□□ 1.59
C9orf3-216ENST00000478603 MEFVO15553 781 aaPredicted RBP25■■□□□ 1.59
C9orf3-216ENST00000478603 NARSO43776 548 aaKnown RBP25■■□□□ 1.59
C9orf3-216ENST00000478603 TKTP29401 623 aaKnown RBP25■■□□□ 1.59
C9orf3-216ENST00000478603 SEZ6Q53EL9 994 aa25■■□□□ 1.59
C9orf3-216ENST00000478603 TMEM105Q8N8V8 129 aa25■■□□□ 1.59
C9orf3-216ENST00000478603 UROC1Q96N76 676 aa25■■□□□ 1.59
C9orf3-216ENST00000478603 MFSD1Q9H3U5 465 aa25■■□□□ 1.59
C9orf3-216ENST00000478603 IGSF9Q9P2J2 1179 aa25■■□□□ 1.59
C9orf3-216ENST00000478603 ANKFY1Q9P2R3 1169 aa25■■□□□ 1.59
C9orf3-216ENST00000478603 C8AP07357 584 aa24.99■■□□□ 1.59
C9orf3-216ENST00000478603 MAPTP10636 758 aaKnown RBP24.99■■□□□ 1.59
C9orf3-216ENST00000478603 OR1D2P34982 312 aa24.99■■□□□ 1.59
C9orf3-216ENST00000478603 STRN3Q13033 797 aa24.99■■□□□ 1.59
C9orf3-216ENST00000478603 ARSHQ5FYA8 562 aa24.99■■□□□ 1.59
C9orf3-216ENST00000478603 LIN9Q5TKA1 542 aa24.99■■□□□ 1.59
C9orf3-216ENST00000478603 PDXDC1Q6P996 788 aa24.99■■□□□ 1.59
C9orf3-216ENST00000478603 RSPO2Q6UXX9 243 aaPredicted RBP24.99■■□□□ 1.59
C9orf3-216ENST00000478603 KCTD17Q8N5Z5 321 aa24.99■■□□□ 1.59
C9orf3-216ENST00000478603 ST13P5Q8NFI4 369 aaPredicted RBP24.99■■□□□ 1.59
C9orf3-216ENST00000478603 LRRC15Q8TF66 581 aa24.99■■□□□ 1.59
C9orf3-216ENST00000478603 EPS15L1Q9UBC2 864 aa24.99■■□□□ 1.59
C9orf3-216ENST00000478603 MTRRQ9UBK8 725 aa24.99■■□□□ 1.59
C9orf3-216ENST00000478603 SMTNP53814 917 aa24.98■■□□□ 1.59
C9orf3-216ENST00000478603 NTHL1P78549 312 aa24.98■■□□□ 1.59
C9orf3-216ENST00000478603 GRIN1Q05586 938 aa24.98■■□□□ 1.59
C9orf3-216ENST00000478603 DHX8Q14562 1220 aaKnown RBP24.98■■□□□ 1.59
C9orf3-216ENST00000478603 PPM1LQ5SGD2 360 aa24.98■■□□□ 1.59
C9orf3-216ENST00000478603 GRASPQ7Z6J2 395 aaPredicted RBP24.98■■□□□ 1.59
C9orf3-216ENST00000478603 C18orf25Q96B23 403 aaPredicted RBP24.98■■□□□ 1.59
C9orf3-216ENST00000478603 DDX27Q96GQ7 796 aaKnown RBP24.98■■□□□ 1.59
C9orf3-216ENST00000478603 SLC38A7Q9NVC3 462 aa24.98■■□□□ 1.59
C9orf3-216ENST00000478603 FAM86C1Q9NVL1 165 aa24.98■■□□□ 1.59
C9orf3-216ENST00000478603 CDY1Q9Y6F8 540 aa24.98■■□□□ 1.59
C9orf3-216ENST00000478603 CACNA1HO95180 2353 aa24.97■■□□□ 1.59
C9orf3-216ENST00000478603 PODXLO00592 558 aa24.97■■□□□ 1.59
C9orf3-216ENST00000478603 CCL16O15467 120 aa24.97■■□□□ 1.59
C9orf3-216ENST00000478603 TOM1L1O75674 476 aa24.97■■□□□ 1.59
C9orf3-216ENST00000478603 KCNE1P15382 129 aa24.97■■□□□ 1.59
C9orf3-216ENST00000478603 RAB33AQ14088 237 aa24.97■■□□□ 1.59
C9orf3-216ENST00000478603 NOLC1Q14978 699 aaKnown RBP eCLIP24.97■■□□□ 1.59
C9orf3-216ENST00000478603 ASTLQ6HA08 431 aaPredicted RBP24.97■■□□□ 1.59
C9orf3-216ENST00000478603 SLC7A14Q8TBB6 771 aa24.97■■□□□ 1.59
C9orf3-216ENST00000478603 AK8Q96MA6 479 aa24.97■■□□□ 1.59
C9orf3-216ENST00000478603 KCND2Q9NZV8 630 aa24.97■■□□□ 1.59
C9orf3-216ENST00000478603 CNTN3Q9P232 1028 aa24.97■■□□□ 1.59
C9orf3-216ENST00000478603 FBXL21Q9UKT6 434 aa24.97■■□□□ 1.59
C9orf3-216ENST00000478603 TRAPPC3O43617 180 aa24.96■■□□□ 1.59
C9orf3-216ENST00000478603 LAMP2P13473 410 aa24.96■■□□□ 1.59
C9orf3-216ENST00000478603 UBA7P41226 1012 aa24.96■■□□□ 1.59
C9orf3-216ENST00000478603 AXDND1Q5T1B0 1012 aaPredicted RBP24.96■■□□□ 1.59
C9orf3-216ENST00000478603 GPBP1Q86WP2 473 aa24.96■■□□□ 1.59
C9orf3-216ENST00000478603 FLCNQ8NFG4 579 aa24.96■■□□□ 1.59
C9orf3-216ENST00000478603 CALML4Q96GE6 196 aa24.96■■□□□ 1.59
C9orf3-216ENST00000478603 REEP2Q9BRK0 252 aa24.96■■□□□ 1.59
C9orf3-216ENST00000478603 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.96■■□□□ 1.59
C9orf3-216ENST00000478603 KCNG1Q9UIX4 513 aa24.96■■□□□ 1.59
C9orf3-216ENST00000478603 POLIQ9UNA4 740 aa24.96■■□□□ 1.59
C9orf3-216ENST00000478603 NOTCH4Q99466 2003 aa24.96■■□□□ 1.59
C9orf3-216ENST00000478603 VPS37CA5D8V6 355 aaPredicted RBP24.95■■□□□ 1.58
C9orf3-216ENST00000478603 CFHP08603 1231 aa24.95■■□□□ 1.58
C9orf3-216ENST00000478603 HNRNPA1P09651 372 aaKnown RBP eCLIP24.95■■□□□ 1.58
C9orf3-216ENST00000478603 FSHRP23945 695 aa24.95■■□□□ 1.58
C9orf3-216ENST00000478603 NCKAP1LP55160 1127 aa24.95■■□□□ 1.58
C9orf3-216ENST00000478603 KARSQ15046 597 aaKnown RBP24.95■■□□□ 1.58
C9orf3-216ENST00000478603 SF3A1Q15459 793 aaKnown RBP24.95■■□□□ 1.58
C9orf3-216ENST00000478603 SLC10A6Q3KNW5 377 aa24.95■■□□□ 1.58
C9orf3-216ENST00000478603 CWF19L1Q69YN2 538 aaKnown RBP24.95■■□□□ 1.58
C9orf3-216ENST00000478603 BRAPQ7Z569 592 aa24.95■■□□□ 1.58
C9orf3-216ENST00000478603 TMEM130Q8N3G9 435 aa24.95■■□□□ 1.58
C9orf3-216ENST00000478603 SLC44A3Q8N4M1 653 aa24.95■■□□□ 1.58
C9orf3-216ENST00000478603 HAPLN2Q9GZV7 340 aa24.95■■□□□ 1.58
C9orf3-216ENST00000478603 BLOC1S4Q9NUP1 217 aa24.95■■□□□ 1.58
C9orf3-216ENST00000478603 LARSQ9P2J5 1176 aaKnown RBP24.95■■□□□ 1.58
C9orf3-216ENST00000478603 BACE2Q9Y5Z0 518 aa24.95■■□□□ 1.58
C9orf3-216ENST00000478603 H0Y858 1186 aa24.94■■□□□ 1.58
C9orf3-216ENST00000478603 NPR3P17342 541 aa24.94■■□□□ 1.58
C9orf3-216ENST00000478603 PLCG1P19174 1290 aa24.94■■□□□ 1.58
C9orf3-216ENST00000478603 MATR3P43243 847 aaKnown RBP eCLIP24.94■■□□□ 1.583e-6■□□□□ 11.2
C9orf3-216ENST00000478603 CUL4AQ13619 759 aa24.94■■□□□ 1.58
C9orf3-216ENST00000478603 MCM6Q14566 821 aa24.94■■□□□ 1.58
C9orf3-216ENST00000478603 ZPBP2Q6X784 338 aa24.94■■□□□ 1.58
C9orf3-216ENST00000478603 ANKS3Q6ZW76 656 aa24.94■■□□□ 1.58
C9orf3-216ENST00000478603 SIX5Q8N196 739 aa24.94■■□□□ 1.58
C9orf3-216ENST00000478603 BICD1Q96G01 975 aa24.94■■□□□ 1.58
C9orf3-216ENST00000478603 CLDN3O15551 220 aa24.93■■□□□ 1.58
C9orf3-216ENST00000478603 SLC26A4O43511 780 aa24.93■■□□□ 1.58
C9orf3-216ENST00000478603 GALR2O43603 387 aaPredicted RBP24.93■■□□□ 1.58
C9orf3-216ENST00000478603 CXCL8P10145 99 aa24.93■■□□□ 1.58
C9orf3-216ENST00000478603 HOXA9P31269 272 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms