RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 NLRP7Q8WX94 980 aa16.01■□□□□ 0.15
USP11-207ENST00000478596 HAS1Q92839 578 aa16.01■□□□□ 0.15
USP11-207ENST00000478596 CDK5RAP3Q96JB5 506 aa16.01■□□□□ 0.15
USP11-207ENST00000478596 FAM193BQ96PV7 902 aaPredicted RBP16.01■□□□□ 0.15
USP11-207ENST00000478596 ADAM33Q9BZ11 813 aa16.01■□□□□ 0.15
USP11-207ENST00000478596 GCOM2Q9BZD3 368 aaPredicted RBP16.01■□□□□ 0.15
USP11-207ENST00000478596 UNC45AQ9H3U1 944 aa16.01■□□□□ 0.15
USP11-207ENST00000478596 HEBP1Q9NRV9 189 aa16.01■□□□□ 0.15
USP11-207ENST00000478596 RXFP3Q9NSD7 469 aa16.01■□□□□ 0.15
USP11-207ENST00000478596 FNIP2Q9P278 1114 aa16.01■□□□□ 0.15
USP11-207ENST00000478596 MAST4O15021 2626 aa16■□□□□ 0.15
USP11-207ENST00000478596 MAN2B1O00754 1011 aa16■□□□□ 0.15
USP11-207ENST00000478596 HNRNPA1P09651 372 aaKnown RBP eCLIP16■□□□□ 0.15
USP11-207ENST00000478596 ZNF806P0C7X5 589 aa16■□□□□ 0.15
USP11-207ENST00000478596 SFPQP23246 707 aaKnown RBP eCLIP16■□□□□ 0.15
USP11-207ENST00000478596 CXCL12P48061 93 aa16■□□□□ 0.15
USP11-207ENST00000478596 AFF1P51825 1210 aaKnown RBP16■□□□□ 0.15
USP11-207ENST00000478596 CDC42EP1Q00587 391 aa16■□□□□ 0.15
USP11-207ENST00000478596 PTPAQ15257 358 aa16■□□□□ 0.15
USP11-207ENST00000478596 SF3A2Q15428 464 aaKnown RBP16■□□□□ 0.15
USP11-207ENST00000478596 HAUS3Q68CZ6 603 aa16■□□□□ 0.15
USP11-207ENST00000478596 PSAPL1Q6NUJ1 521 aa16■□□□□ 0.15
USP11-207ENST00000478596 ZNF746Q6NUN9 644 aaPredicted RBP16■□□□□ 0.15
USP11-207ENST00000478596 DNASE1L2Q92874 299 aa16■□□□□ 0.15
USP11-207ENST00000478596 GATA6Q92908 595 aa16■□□□□ 0.15
USP11-207ENST00000478596 FAM167AQ96KS9 214 aa16■□□□□ 0.15
USP11-207ENST00000478596 CCDC43Q96MW1 224 aaKnown RBP16■□□□□ 0.15
USP11-207ENST00000478596 MTMR9Q96QG7 549 aa16■□□□□ 0.15
USP11-207ENST00000478596 LRWD1Q9UFC0 647 aa16■□□□□ 0.15
USP11-207ENST00000478596 PIN4Q9Y237 131 aaKnown RBP16■□□□□ 0.15
USP11-207ENST00000478596 DMXL2Q8TDJ6 3036 aa16■□□□□ 0.15
USP11-207ENST00000478596 CUTAO60888 179 aa15.99■□□□□ 0.15
USP11-207ENST00000478596 PPP6R2O75170 966 aa15.99■□□□□ 0.15
USP11-207ENST00000478596 ECI2O75521 394 aa15.99■□□□□ 0.15
USP11-207ENST00000478596 PSMD10O75832 226 aa15.99■□□□□ 0.15
USP11-207ENST00000478596 PSAPP07602 524 aa15.99■□□□□ 0.15
USP11-207ENST00000478596 SFNP31947 248 aa15.99■□□□□ 0.15
USP11-207ENST00000478596 NTHL1P78549 312 aa15.99■□□□□ 0.15
USP11-207ENST00000478596 TRMT1LQ7Z2T5 733 aaKnown RBP15.99■□□□□ 0.15
USP11-207ENST00000478596 LONP2Q86WA8 852 aa15.99■□□□□ 0.15
USP11-207ENST00000478596 SMAP1Q8IYB5 467 aaPredicted RBP15.99■□□□□ 0.15
USP11-207ENST00000478596 SNX29Q8TEQ0 813 aa15.99■□□□□ 0.15
USP11-207ENST00000478596 RSAD1Q9HA92 442 aa15.99■□□□□ 0.15
USP11-207ENST00000478596 VAV3Q9UKW4 847 aa15.99■□□□□ 0.15
USP11-207ENST00000478596 PRG3Q9Y2Y8 225 aaPredicted RBP15.99■□□□□ 0.15
USP11-207ENST00000478596 PCDHB2Q9Y5E7 798 aa15.99■□□□□ 0.15
USP11-207ENST00000478596 CNTNAP2Q9UHC6 1331 aa15.98■□□□□ 0.15
USP11-207ENST00000478596 CHURC1-FNTBB4DL54 471 aa15.98■□□□□ 0.15
USP11-207ENST00000478596 PAPSS2O95340 614 aaPredicted RBP15.98■□□□□ 0.15
USP11-207ENST00000478596 LONP1P36776 959 aaKnown RBP15.98■□□□□ 0.15
USP11-207ENST00000478596 FNTBP49356 437 aa15.98■□□□□ 0.15
USP11-207ENST00000478596 FXR2P51116 673 aaKnown RBP eCLIP15.98■□□□□ 0.15
USP11-207ENST00000478596 SATB1Q01826 763 aa15.98■□□□□ 0.15
USP11-207ENST00000478596 CREMQ03060 361 aa15.98■□□□□ 0.15
USP11-207ENST00000478596 SRSF5Q13243 272 aaKnown RBP15.98■□□□□ 0.15
USP11-207ENST00000478596 PPP2R5CQ13362 524 aa15.98■□□□□ 0.15
USP11-207ENST00000478596 KRT79Q5XKE5 535 aa15.98■□□□□ 0.15
USP11-207ENST00000478596 MRPL10Q7Z7H8 261 aaKnown RBP15.98■□□□□ 0.15
USP11-207ENST00000478596 COLGALT2Q8IYK4 626 aa15.98■□□□□ 0.15
USP11-207ENST00000478596 C4orf32Q8N8J7 132 aa15.98■□□□□ 0.15
USP11-207ENST00000478596 ITFG1Q8TB96 612 aa15.98■□□□□ 0.15
USP11-207ENST00000478596 LOXL4Q96JB6 756 aa15.98■□□□□ 0.15
USP11-207ENST00000478596 CSRNP2Q9H175 543 aa15.98■□□□□ 0.15
USP11-207ENST00000478596 DISC1Q9NRI5 854 aa15.98■□□□□ 0.15
USP11-207ENST00000478596 FBXO2Q9UK22 296 aaPredicted RBP15.98■□□□□ 0.15
USP11-207ENST00000478596 KCNH3Q9ULD8 1083 aa15.98■□□□□ 0.15
USP11-207ENST00000478596 NDRG2Q9UN36 371 aaKnown RBP15.98■□□□□ 0.15
USP11-207ENST00000478596 SRPRBQ9Y5M8 271 aaKnown RBP15.98■□□□□ 0.15
USP11-207ENST00000478596 ARID2Q68CP9 1835 aa15.98■□□□□ 0.15
USP11-207ENST00000478596 POU2F2P09086 479 aa15.97■□□□□ 0.15
USP11-207ENST00000478596 HOXA9P31269 272 aa15.97■□□□□ 0.15
USP11-207ENST00000478596 CCT6AP40227 531 aaKnown RBP15.97■□□□□ 0.15
USP11-207ENST00000478596 UBA7P41226 1012 aa15.97■□□□□ 0.15
USP11-207ENST00000478596 CYP4A11Q02928 519 aa15.97■□□□□ 0.15
USP11-207ENST00000478596 NPAS3Q8IXF0 933 aa15.97■□□□□ 0.15
USP11-207ENST00000478596 ZCCHC14Q8WYQ9 949 aaKnown RBP15.97■□□□□ 0.15
USP11-207ENST00000478596 CLIC6Q96NY7 704 aa15.97■□□□□ 0.15
USP11-207ENST00000478596 INO80BQ9C086 356 aaPredicted RBP15.97■□□□□ 0.15
USP11-207ENST00000478596 LMAN1LQ9HAT1 526 aa15.97■□□□□ 0.15
USP11-207ENST00000478596 FAM13BQ9NYF5 915 aa15.97■□□□□ 0.15
USP11-207ENST00000478596 FBXW11Q9UKB1 542 aa15.97■□□□□ 0.15
USP11-207ENST00000478596 PCDHA10Q9Y5I2 948 aa15.97■□□□□ 0.15
USP11-207ENST00000478596 STK24Q9Y6E0 443 aa15.97■□□□□ 0.15
USP11-207ENST00000478596 LOC400499M0QZD8 3231 aa15.97■□□□□ 0.15
USP11-207ENST00000478596 AKAP13Q12802 2813 aa15.96■□□□□ 0.15
USP11-207ENST00000478596 HELZ2Q9BYK8 2649 aaKnown RBP15.96■□□□□ 0.15
USP11-207ENST00000478596 PP2D1A8MPX8 630 aa15.96■□□□□ 0.15
USP11-207ENST00000478596 POMCP01189 267 aa15.96■□□□□ 0.15
USP11-207ENST00000478596 OR1G1P47890 313 aa15.96■□□□□ 0.15
USP11-207ENST00000478596 DSC1Q08554 894 aa15.96■□□□□ 0.15
USP11-207ENST00000478596 FOXC1Q12948 553 aa15.96■□□□□ 0.15
USP11-207ENST00000478596 CCDC73Q6ZRK6 1079 aa15.96■□□□□ 0.15
USP11-207ENST00000478596 SPEM1Q8N4L4 309 aa15.96■□□□□ 0.15
USP11-207ENST00000478596 RDM1Q8NG50 284 aa15.96■□□□□ 0.15
USP11-207ENST00000478596 CALML4Q96GE6 196 aa15.96■□□□□ 0.15
USP11-207ENST00000478596 AK8Q96MA6 479 aa15.96■□□□□ 0.15
USP11-207ENST00000478596 ARRDC1-AS1Q9H2J1 176 aa15.96■□□□□ 0.15
USP11-207ENST00000478596 GABBR1Q9UBS5 961 aa15.96■□□□□ 0.15
USP11-207ENST00000478596 RCOR1Q9UKL0 485 aa15.96■□□□□ 0.15
USP11-207ENST00000478596 PCDHA7Q9UN72 937 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms