RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 ZSCAN22P10073 491 aaPredicted RBP23.77■■□□□ 1.4
COL9A3-211ENST00000477612 SOX4Q06945 474 aaPredicted RBP23.77■■□□□ 1.4
COL9A3-211ENST00000477612 STK38Q15208 465 aa23.77■■□□□ 1.4
COL9A3-211ENST00000477612 FAM171A1Q5VUB5 890 aa23.77■■□□□ 1.4
COL9A3-211ENST00000477612 KANK3Q6NY19 840 aa23.77■■□□□ 1.4
COL9A3-211ENST00000477612 PDXDC1Q6P996 788 aa23.77■■□□□ 1.4
COL9A3-211ENST00000477612 CYP26C1Q6V0L0 522 aa23.77■■□□□ 1.4
COL9A3-211ENST00000477612 SV2BQ7L1I2 683 aa23.77■■□□□ 1.4
COL9A3-211ENST00000477612 HASPINQ8TF76 798 aa23.77■■□□□ 1.4
COL9A3-211ENST00000477612 DNAJC19Q96DA6 116 aa23.77■■□□□ 1.4
COL9A3-211ENST00000477612 PLEKHA4Q9H4M7 779 aa23.77■■□□□ 1.4
COL9A3-211ENST00000477612 PLEKHA5Q9HAU0 1116 aa23.77■■□□□ 1.4
COL9A3-211ENST00000477612 ANKFY1Q9P2R3 1169 aa23.77■■□□□ 1.4
COL9A3-211ENST00000477612 SPTLC2O15270 562 aa23.76■■□□□ 1.39
COL9A3-211ENST00000477612 FAM189A1O60320 539 aa23.76■■□□□ 1.39
COL9A3-211ENST00000477612 B3GAT3O94766 335 aa23.76■■□□□ 1.39
COL9A3-211ENST00000477612 FGFR3P22607 806 aa23.76■■□□□ 1.39
COL9A3-211ENST00000477612 IGFBP6P24592 240 aaPredicted RBP23.76■■□□□ 1.39
COL9A3-211ENST00000477612 KYAT1Q16773 422 aa23.76■■□□□ 1.39
COL9A3-211ENST00000477612 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.76■■□□□ 1.39
COL9A3-211ENST00000477612 MAP4K3Q8IVH8 894 aa23.76■■□□□ 1.39
COL9A3-211ENST00000477612 DDX12PQ92771 950 aa23.76■■□□□ 1.39
COL9A3-211ENST00000477612 GOLGA2P5Q9HBQ8 144 aa23.76■■□□□ 1.39
COL9A3-211ENST00000477612 MAN1C1Q9NR34 630 aa23.76■■□□□ 1.39
COL9A3-211ENST00000477612 TFIP11Q9UBB9 837 aaKnown RBP23.76■■□□□ 1.39
COL9A3-211ENST00000477612 MUTYHQ9UIF7 546 aa23.76■■□□□ 1.39
COL9A3-211ENST00000477612 NR2E1Q9Y466 385 aa23.76■■□□□ 1.39
COL9A3-211ENST00000477612 A0A087X0B3 334 aa23.75■■□□□ 1.39
COL9A3-211ENST00000477612 MYMKA6NI61 221 aa23.75■■□□□ 1.39
COL9A3-211ENST00000477612 TGM5O43548 720 aa23.75■■□□□ 1.39
COL9A3-211ENST00000477612 F13A1P00488 732 aa23.75■■□□□ 1.39
COL9A3-211ENST00000477612 ADRB2P07550 413 aa23.75■■□□□ 1.39
COL9A3-211ENST00000477612 HSP90AA1P07900 732 aaKnown RBP23.75■■□□□ 1.39
COL9A3-211ENST00000477612 CLTAP09496 248 aa23.75■■□□□ 1.39
COL9A3-211ENST00000477612 HARSP12081 509 aaKnown RBP23.75■■□□□ 1.39
COL9A3-211ENST00000477612 NMT1P30419 496 aaKnown RBP23.75■■□□□ 1.39
COL9A3-211ENST00000477612 RPL9P32969 192 aaKnown RBP23.75■■□□□ 1.39
COL9A3-211ENST00000477612 LIG4P49917 911 aa23.75■■□□□ 1.39
COL9A3-211ENST00000477612 ELMSAN1Q6PJG2 1045 aa23.75■■□□□ 1.39
COL9A3-211ENST00000477612 PRSS55Q6UWB4 352 aaPredicted RBP23.75■■□□□ 1.39
COL9A3-211ENST00000477612 TMC5Q6UXY8 1006 aa23.75■■□□□ 1.39
COL9A3-211ENST00000477612 DYMQ7RTS9 669 aa23.75■■□□□ 1.39
COL9A3-211ENST00000477612 ZNF720Q7Z2F6 126 aa23.75■■□□□ 1.39
COL9A3-211ENST00000477612 C3orf58Q8NDZ4 430 aa23.75■■□□□ 1.39
COL9A3-211ENST00000477612 BICD1Q96G01 975 aa23.75■■□□□ 1.39
COL9A3-211ENST00000477612 CLSTN3Q9BQT9 956 aa23.75■■□□□ 1.39
COL9A3-211ENST00000477612 STRA6Q9BX79 667 aa23.75■■□□□ 1.39
COL9A3-211ENST00000477612 SEL1LQ9UBV2 794 aa23.75■■□□□ 1.39
COL9A3-211ENST00000477612 USTQ9Y2C2 406 aa23.75■■□□□ 1.39
COL9A3-211ENST00000477612 TECTAO75443 2155 aa23.74■■□□□ 1.39
COL9A3-211ENST00000477612 TTC26A0AVF1 554 aa23.74■■□□□ 1.39
COL9A3-211ENST00000477612 PRR33A8MZF0 331 aa23.74■■□□□ 1.39
COL9A3-211ENST00000477612 HNRNPDLO14979 420 aaKnown RBP23.74■■□□□ 1.39
COL9A3-211ENST00000477612 TRAPPC3O43617 180 aa23.74■■□□□ 1.39
COL9A3-211ENST00000477612 PPP1R37O75864 691 aa23.74■■□□□ 1.39
COL9A3-211ENST00000477612 SEZ6Q53EL9 994 aa23.74■■□□□ 1.39
COL9A3-211ENST00000477612 ATL3Q6DD88 541 aa23.74■■□□□ 1.39
COL9A3-211ENST00000477612 SLC39A4Q6P5W5 647 aa23.74■■□□□ 1.39
COL9A3-211ENST00000477612 FEZF2Q8TBJ5 459 aa23.74■■□□□ 1.39
COL9A3-211ENST00000477612 HVCN1Q96D96 273 aa23.74■■□□□ 1.39
COL9A3-211ENST00000477612 ZHX3Q9H4I2 956 aa23.74■■□□□ 1.39
COL9A3-211ENST00000477612 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.74■■□□□ 1.39
COL9A3-211ENST00000477612 A0A0B4J269 797 aa23.73■■□□□ 1.39
COL9A3-211ENST00000477612 FRMD3A2A2Y4 597 aa23.73■■□□□ 1.39
COL9A3-211ENST00000477612 OGTO15294 1046 aa23.73■■□□□ 1.39
COL9A3-211ENST00000477612 WEE2P0C1S8 567 aa23.73■■□□□ 1.39
COL9A3-211ENST00000477612 RPL17P18621 184 aaKnown RBP23.73■■□□□ 1.39
COL9A3-211ENST00000477612 STAT6P42226 847 aa23.73■■□□□ 1.39
COL9A3-211ENST00000477612 ZBTB6Q15916 424 aa23.73■■□□□ 1.39
COL9A3-211ENST00000477612 PSMD5Q16401 504 aa23.73■■□□□ 1.39
COL9A3-211ENST00000477612 CEP57Q86XR8 500 aa23.73■■□□□ 1.39
COL9A3-211ENST00000477612 PALB2Q86YC2 1186 aa23.73■■□□□ 1.39
COL9A3-211ENST00000477612 EDAQ92838 391 aa23.73■■□□□ 1.39
COL9A3-211ENST00000477612 TSPAN18Q96SJ8 248 aa23.73■■□□□ 1.39
COL9A3-211ENST00000477612 STYXL1Q9Y6J8 313 aa23.73■■□□□ 1.39
COL9A3-211ENST00000477612 DOCK6Q96HP0 2047 aa23.72■■□□□ 1.39
COL9A3-211ENST00000477612 CCDC195A0A1B0GUA6 201 aa23.72■■□□□ 1.39
COL9A3-211ENST00000477612 PODXLO00592 558 aa23.72■■□□□ 1.39
COL9A3-211ENST00000477612 CUTAO60888 179 aa23.72■■□□□ 1.39
COL9A3-211ENST00000477612 CXCL8P10145 99 aa23.72■■□□□ 1.39
COL9A3-211ENST00000477612 GAP43P17677 238 aa23.72■■□□□ 1.39
COL9A3-211ENST00000477612 COL9A1P20849 921 aa23.72■■□□□ 1.39
COL9A3-211ENST00000477612 MATR3P43243 847 aaKnown RBP eCLIP23.72■■□□□ 1.39
COL9A3-211ENST00000477612 ZC2HC1CQ53FD0 456 aaPredicted RBP23.72■■□□□ 1.39
COL9A3-211ENST00000477612 SFR1Q86XK3 245 aa23.72■■□□□ 1.39
COL9A3-211ENST00000477612 ZDHHC14Q8IZN3 488 aa23.72■■□□□ 1.39
COL9A3-211ENST00000477612 PANK2Q9BZ23 570 aa23.72■■□□□ 1.39
COL9A3-211ENST00000477612 OLFML3Q9NRN5 406 aa23.72■■□□□ 1.39
COL9A3-211ENST00000477612 ZDHHC7Q9NXF8 308 aa23.72■■□□□ 1.39
COL9A3-211ENST00000477612 DOCK8Q8NF50 2099 aa23.71■■□□□ 1.39
COL9A3-211ENST00000477612 C2CD4DB7Z1M9 353 aa23.71■■□□□ 1.39
COL9A3-211ENST00000477612 CYP3A5P20815 502 aa23.71■■□□□ 1.39
COL9A3-211ENST00000477612 LRPAP1P30533 357 aa23.71■■□□□ 1.39
COL9A3-211ENST00000477612 TNFSF9P41273 254 aa23.71■■□□□ 1.39
COL9A3-211ENST00000477612 E2F4Q16254 413 aa23.71■■□□□ 1.39
COL9A3-211ENST00000477612 AXDND1Q5T1B0 1012 aaPredicted RBP23.71■■□□□ 1.39
COL9A3-211ENST00000477612 KREMEN2Q8NCW0 462 aa23.71■■□□□ 1.39
COL9A3-211ENST00000477612 C18orf25Q96B23 403 aaPredicted RBP23.71■■□□□ 1.39
COL9A3-211ENST00000477612 MTRRQ9UBK8 725 aa23.71■■□□□ 1.39
COL9A3-211ENST00000477612 FBXW11Q9UKB1 542 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms