RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 TATDN1Q6P1N9 297 aa15.53■□□□□ 0.08
HDAC6-220ENST00000477528 BTNL9Q6UXG8 535 aa15.53■□□□□ 0.08
HDAC6-220ENST00000477528 EPM2AIP1Q7L775 607 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-220ENST00000477528 SLC13A5Q86YT5 568 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-220ENST00000477528 PITPNM3Q9BZ71 974 aa15.53■□□□□ 0.08
HDAC6-220ENST00000477528 REXO2Q9Y3B8 237 aaKnown RBP15.53■□□□□ 0.08
HDAC6-220ENST00000477528 NUB1Q9Y5A7 615 aa15.53■□□□□ 0.08
HDAC6-220ENST00000477528 GLI1P08151 1106 aa15.53■□□□□ 0.08
HDAC6-220ENST00000477528 LSP1P33241 339 aa15.53■□□□□ 0.08
HDAC6-220ENST00000477528 MAPK7Q13164 816 aa15.53■□□□□ 0.08
HDAC6-220ENST00000477528 CCT8L2Q96SF2 557 aa15.53■□□□□ 0.08
HDAC6-220ENST00000477528 PCSK1NQ9UHG2 260 aa15.53■□□□□ 0.08
HDAC6-220ENST00000477528 PSMD10O75832 226 aa15.53■□□□□ 0.08
HDAC6-220ENST00000477528 TXNP10599 105 aaKnown RBP15.53■□□□□ 0.08
HDAC6-220ENST00000477528 PGM5Q15124 567 aa15.53■□□□□ 0.08
HDAC6-220ENST00000477528 FASTKD5Q7L8L6 764 aaKnown RBP15.53■□□□□ 0.08
HDAC6-220ENST00000477528 TARS2Q9BW92 718 aaKnown RBP15.53■□□□□ 0.08
HDAC6-220ENST00000477528 VPS33BQ9H267 617 aa15.53■□□□□ 0.08
HDAC6-220ENST00000477528 SSX2IPQ9Y2D8 614 aa15.53■□□□□ 0.08
HDAC6-220ENST00000477528 PCDHGC5Q9Y5F6 944 aa15.53■□□□□ 0.08
HDAC6-220ENST00000477528 RCCD1A6NED2 376 aa15.52■□□□□ 0.08
HDAC6-220ENST00000477528 PPP1R11O60927 126 aaPredicted RBP15.52■□□□□ 0.08
HDAC6-220ENST00000477528 CYP11B1P15538 503 aa15.52■□□□□ 0.08
HDAC6-220ENST00000477528 CLNS1AP54105 237 aaKnown RBP15.52■□□□□ 0.08
HDAC6-220ENST00000477528 RSPH3Q86UC2 560 aa15.52■□□□□ 0.08
HDAC6-220ENST00000477528 ZKSCAN4Q969J2 545 aaPredicted RBP15.52■□□□□ 0.08
HDAC6-220ENST00000477528 FAF2Q96CS3 445 aa15.52■□□□□ 0.08
HDAC6-220ENST00000477528 TXLNGQ9NUQ3 528 aa15.52■□□□□ 0.08
HDAC6-220ENST00000477528 CHORDC1Q9UHD1 332 aaPredicted RBP15.52■□□□□ 0.08
HDAC6-220ENST00000477528 PLIN4Q96Q06 1357 aa15.52■□□□□ 0.08
HDAC6-220ENST00000477528 COILP38432 576 aaPredicted RBP15.52■□□□□ 0.08
HDAC6-220ENST00000477528 PRKCIP41743 596 aa15.52■□□□□ 0.08
HDAC6-220ENST00000477528 FNTAP49354 379 aa15.52■□□□□ 0.08
HDAC6-220ENST00000477528 PDE1BQ01064 536 aa15.52■□□□□ 0.08
HDAC6-220ENST00000477528 STAT4Q14765 748 aa15.52■□□□□ 0.08
HDAC6-220ENST00000477528 ECM1Q16610 540 aa15.52■□□□□ 0.08
HDAC6-220ENST00000477528 KLHL38Q2WGJ6 581 aa15.52■□□□□ 0.08
HDAC6-220ENST00000477528 ARMCX2Q7L311 632 aa15.52■□□□□ 0.08
HDAC6-220ENST00000477528 FAM129AQ9BZQ8 928 aa15.52■□□□□ 0.08
HDAC6-220ENST00000477528 KLC2Q9H0B6 622 aa15.52■□□□□ 0.08
HDAC6-220ENST00000477528 PCDHAC2Q9Y5I4 1007 aa15.52■□□□□ 0.08
HDAC6-220ENST00000477528 SLURP2P0DP57 97 aa15.52■□□□□ 0.07
HDAC6-220ENST00000477528 TAF12Q16514 161 aa15.52■□□□□ 0.07
HDAC6-220ENST00000477528 WDR72Q3MJ13 1102 aa15.52■□□□□ 0.07
HDAC6-220ENST00000477528 HIBCHQ6NVY1 386 aaPredicted RBP15.52■□□□□ 0.07
HDAC6-220ENST00000477528 AFAP1L2Q8N4X5 818 aa15.52■□□□□ 0.07
HDAC6-220ENST00000477528 CCNYQ8ND76 341 aa15.52■□□□□ 0.07
HDAC6-220ENST00000477528 ZNF473Q8WTR7 871 aaKnown RBP15.52■□□□□ 0.07
HDAC6-220ENST00000477528 KRT3P12035 628 aa15.52■□□□□ 0.07
HDAC6-220ENST00000477528 ARSEP51690 589 aa15.52■□□□□ 0.07
HDAC6-220ENST00000477528 SLC12A2P55011 1212 aa15.52■□□□□ 0.07
HDAC6-220ENST00000477528 AMPD2Q01433 879 aa15.52■□□□□ 0.07
HDAC6-220ENST00000477528 MAP7D1Q3KQU3 841 aa15.52■□□□□ 0.07
HDAC6-220ENST00000477528 IER5Q5VY09 327 aa15.52■□□□□ 0.07
HDAC6-220ENST00000477528 BZW1Q7L1Q6 419 aaKnown RBP15.52■□□□□ 0.07
HDAC6-220ENST00000477528 OSBPL8Q9BZF1 889 aa15.52■□□□□ 0.07
HDAC6-220ENST00000477528 SMARCAD1Q9H4L7 1026 aa15.52■□□□□ 0.07
HDAC6-220ENST00000477528 DDX3XO00571 662 aaKnown RBP eCLIP15.51■□□□□ 0.071e-8■■■■□ 23.1
HDAC6-220ENST00000477528 ARL1P40616 181 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-220ENST00000477528 EPC2Q52LR7 807 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 KCTD10Q9H3F6 313 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 ELP3Q9H9T3 547 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 WDR35Q9P2L0 1181 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 SDC4P31431 198 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 PPP6R3Q5H9R7 873 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-220ENST00000477528 KDM7AQ6ZMT4 941 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 SIX6OS1Q8N1H7 587 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 SLC20A1Q8WUM9 679 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 C18orf8Q96DM3 657 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 GANQ9H2C0 597 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 COL1A1P02452 1464 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-220ENST00000477528 DUOX1Q9NRD9 1551 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 PABPN1LA6NDY0 278 aaKnown RBP15.51■□□□□ 0.07
HDAC6-220ENST00000477528 ZBTB39O15060 712 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 FAM102AQ5T9C2 384 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-220ENST00000477528 BEST2Q8NFU1 509 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 AENQ8WTP8 325 aaKnown RBP15.51■□□□□ 0.07
HDAC6-220ENST00000477528 HDAC7Q8WUI4 952 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 CFAP36Q96G28 342 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 PI4K2BG5E9Z4 385 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 GOLGA8MH3BSY2 632 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 WNT10BO00744 389 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 SUPT20HL2P0C7V6 817 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 HSPA9P38646 679 aaKnown RBP15.51■□□□□ 0.07
HDAC6-220ENST00000477528 KCNJ1P48048 391 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 CENPCQ03188 943 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 KCNA1Q09470 495 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 PDIA2Q13087 525 aaKnown RBP15.51■□□□□ 0.07
HDAC6-220ENST00000477528 CUL2Q13617 745 aa15.51■□□□□ 0.07
HDAC6-220ENST00000477528 PIGHQ14442 188 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-220ENST00000477528 PDE2AO00408 941 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-220ENST00000477528 MEFVO15553 781 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-220ENST00000477528 ABL1P00519 1130 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 SPATA31C1P0DKV0 1188 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 C11orf63Q6NUN7 778 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 ZBED8Q8IZ13 594 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 TAS1R2Q8TE23 839 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 TBC1D31Q96DN5 1066 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 MED15Q96RN5 788 aa15.5■□□□□ 0.07
HDAC6-220ENST00000477528 SLC25A27O95847 323 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms