RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 WDFY4Q6ZS81 3184 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 TOM1L1O75674 476 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 SPATA31D3P0C874 917 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 MYBP10242 640 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 HARSP12081 509 aaKnown RBP13.41□□□□□ -0.26
SSR1-205ENST00000475213 IGFBP6P24592 240 aaPredicted RBP13.41□□□□□ -0.26
SSR1-205ENST00000475213 CLCNKBP51801 687 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 NCKAP1LP55160 1127 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 CREMQ03060 361 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 NOLC1Q14978 699 aaKnown RBP eCLIP13.41□□□□□ -0.26
SSR1-205ENST00000475213 UPP1Q16831 310 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 SPECC1Q5M775 1068 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 C15orf39Q6ZRI6 1047 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 SPATA31D4Q6ZUB0 917 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 HFE2Q6ZVN8 426 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 USP49Q70CQ1 688 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 CEP57Q86XR8 500 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 CMASQ8NFW8 434 aaPredicted RBP13.41□□□□□ -0.26
SSR1-205ENST00000475213 EPSTI1Q96J88 318 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 SNX27Q96L92 541 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 ACAP3Q96P50 834 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 GOLGA2P5Q9HBQ8 144 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 ANKFY1Q9P2R3 1169 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 DPP7Q9UHL4 492 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 FBXO2Q9UK22 296 aaPredicted RBP13.41□□□□□ -0.26
SSR1-205ENST00000475213 MTMR6Q9Y217 621 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 DOCK8Q8NF50 2099 aa13.41□□□□□ -0.26
SSR1-205ENST00000475213 CCDC195A0A1B0GUA6 201 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 H0YCG3 227 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 TMEM189-UBE2V1I3L0A0 370 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 MEFVO15553 781 aaPredicted RBP13.4□□□□□ -0.26
SSR1-205ENST00000475213 TGM5O43548 720 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 RFPL2O75678 378 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 B3GAT3O94766 335 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 FAM13AO94988 1023 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 C1RP00736 705 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 ZNF131P52739 623 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 CEBPZQ03701 1054 aaKnown RBP13.4□□□□□ -0.26
SSR1-205ENST00000475213 SOX4Q06945 474 aaPredicted RBP13.4□□□□□ -0.26
SSR1-205ENST00000475213 ELAVL2Q12926 359 aaKnown RBP13.4□□□□□ -0.26
SSR1-205ENST00000475213 PSMD5Q16401 504 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 PTPN21Q16825 1174 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 LILRA6Q6PI73 481 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 ELMSAN1Q6PJG2 1045 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 DCLRE1AQ6PJP8 1040 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 CD300LGQ6UXG3 332 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 ZPBP2Q6X784 338 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 TRIM67Q6ZTA4 783 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 HAUS6Q7Z4H7 955 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 MYCT1Q8N699 235 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 TDRD5Q8NAT2 981 aaKnown RBP13.4□□□□□ -0.26
SSR1-205ENST00000475213 LNX1Q8TBB1 728 aaPredicted RBP13.4□□□□□ -0.26
SSR1-205ENST00000475213 HDAC7Q8WUI4 952 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 PIK3R5Q8WYR1 880 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 LARP4BQ92615 738 aaKnown RBP13.4□□□□□ -0.26
SSR1-205ENST00000475213 KCNN1Q92952 543 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 UROC1Q96N76 676 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 ZMAT2Q96NC0 199 aaKnown RBP13.4□□□□□ -0.26
SSR1-205ENST00000475213 CLIC6Q96NY7 704 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 CLSTN3Q9BQT9 956 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 PLEKHA4Q9H4M7 779 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 PARVGQ9HBI0 331 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 CNTN3Q9P232 1028 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 USTQ9Y2C2 406 aa13.4□□□□□ -0.26
SSR1-205ENST00000475213 SRPRBQ9Y5M8 271 aaKnown RBP13.4□□□□□ -0.26
SSR1-205ENST00000475213 ZDBF2Q9HCK1 2354 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 MUC6Q6W4X9 2439 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 TMEM221A6NGB7 291 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 M0R296 226 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 CLDN3O15551 220 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 STX6O43752 255 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 KRT18P05783 430 aaKnown RBP13.39□□□□□ -0.27
SSR1-205ENST00000475213 KCNE1P15382 129 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 DDIT3P35638 169 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 MCL1Q07820 350 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 SEZ6Q53EL9 994 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.39□□□□□ -0.27
SSR1-205ENST00000475213 CCDC149Q6ZUS6 474 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 ZDHHC14Q8IZN3 488 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 C3orf58Q8NDZ4 430 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 SNX21Q969T3 373 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 BICD1Q96G01 975 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 USP28Q96RU2 1077 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 RHOBTB2Q9BYZ6 727 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 HAPLN2Q9GZV7 340 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 SLC38A7Q9NVC3 462 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 LIMD1Q9UGP4 676 aa13.39□□□□□ -0.27
SSR1-205ENST00000475213 ARIH1Q9Y4X5 557 aaPredicted RBP13.39□□□□□ -0.27
SSR1-205ENST00000475213 K7ENM7 598 aa13.38□□□□□ -0.27
SSR1-205ENST00000475213 ADAM12O43184 909 aa13.38□□□□□ -0.27
SSR1-205ENST00000475213 TRAK2O60296 914 aa13.38□□□□□ -0.27
SSR1-205ENST00000475213 PAPLNO95428 1278 aa13.38□□□□□ -0.27
SSR1-205ENST00000475213 FGFR3P22607 806 aa13.38□□□□□ -0.27
SSR1-205ENST00000475213 MATR3P43243 847 aaKnown RBP eCLIP13.38□□□□□ -0.272e-7■■■■□ 19.4
SSR1-205ENST00000475213 BRCC3P46736 316 aa13.38□□□□□ -0.27
SSR1-205ENST00000475213 SIGLEC14Q08ET2 396 aa13.38□□□□□ -0.27
SSR1-205ENST00000475213 SLC10A6Q3KNW5 377 aa13.38□□□□□ -0.27
SSR1-205ENST00000475213 PDXDC1Q6P996 788 aa13.38□□□□□ -0.27
SSR1-205ENST00000475213 CYP26C1Q6V0L0 522 aa13.38□□□□□ -0.27
SSR1-205ENST00000475213 BMP8AQ7Z5Y6 402 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms