RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 RB1P06400 928 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 NFICP08651 508 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 NR2F2P24468 414 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 OR1G1P47890 313 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 ALDH7A1P49419 539 aaKnown RBP17.1■□□□□ 0.33
COL1A1-204ENST00000474644 PMS1P54277 932 aaKnown RBP17.1■□□□□ 0.33
COL1A1-204ENST00000474644 MYBPC2Q14324 1141 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 NFIL3Q16649 462 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 KLHL40Q2TBA0 621 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 EDRF1Q3B7T1 1238 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 JADE1Q6IE81 842 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 DEFB123Q8N688 67 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 BCL7CQ8WUZ0 217 aaPredicted RBP17.1■□□□□ 0.33
COL1A1-204ENST00000474644 C18orf25Q96B23 403 aaPredicted RBP17.1■□□□□ 0.33
COL1A1-204ENST00000474644 DHTKD1Q96HY7 919 aaPredicted RBP17.1■□□□□ 0.33
COL1A1-204ENST00000474644 ASB7Q9H672 318 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 GOLGA2P5Q9HBQ8 144 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 MARCH5Q9NX47 278 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 TUBGCP4Q9UGJ1 667 aa17.1■□□□□ 0.33
COL1A1-204ENST00000474644 PRG3Q9Y2Y8 225 aaPredicted RBP17.1■□□□□ 0.33
COL1A1-204ENST00000474644 CHD7Q9P2D1 2997 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 CARNS1A5YM72 827 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 TRIM49BA6NDI0 452 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 F8W810 466 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 NRP1O14786 923 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 FGF18O76093 207 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 ITGB1P05556 798 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 CCNE1P24864 410 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 LRRC63Q05C16 580 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 GPM6BQ13491 265 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 HSP90AA2PQ14568 343 aaPredicted RBP17.09■□□□□ 0.33
COL1A1-204ENST00000474644 ZBTB6Q15916 424 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 KLHL10Q6JEL2 608 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 EFCAB13Q8IY85 973 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 RDH13Q8NBN7 331 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 TSPAN18Q96SJ8 248 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 TSG101Q99816 390 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 PAAF1Q9BRP4 392 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 PDE11AQ9HCR9 933 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 SPG21Q9NZD8 308 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 UBQLN1Q9UMX0 589 aaKnown RBP17.09■□□□□ 0.33
COL1A1-204ENST00000474644 CTNND2Q9UQB3 1225 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 DERAQ9Y315 318 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 C2CD2Q9Y426 696 aa17.09■□□□□ 0.33
COL1A1-204ENST00000474644 TDRD15B5MCY1 1934 aaKnown RBP17.09■□□□□ 0.33
COL1A1-204ENST00000474644 CITO14578 2027 aa17.08■□□□□ 0.33
COL1A1-204ENST00000474644 LPXNO60711 386 aa17.08■□□□□ 0.32
COL1A1-204ENST00000474644 ALDH2P05091 517 aa17.08■□□□□ 0.32
COL1A1-204ENST00000474644 CASP4P49662 377 aa17.08■□□□□ 0.32
COL1A1-204ENST00000474644 CYP24A1Q07973 514 aa17.08■□□□□ 0.32
COL1A1-204ENST00000474644 PAK1Q13153 545 aa17.08■□□□□ 0.32
COL1A1-204ENST00000474644 TMEM132DQ14C87 1099 aa17.08■□□□□ 0.32
COL1A1-204ENST00000474644 DPCR1Q3MIW9 517 aa17.08■□□□□ 0.32
COL1A1-204ENST00000474644 ANKRD40Q6AI12 368 aa17.08■□□□□ 0.32
COL1A1-204ENST00000474644 CAVIN1Q6NZI2 390 aaKnown RBP17.08■□□□□ 0.32
COL1A1-204ENST00000474644 TMEM130Q8N3G9 435 aa17.08■□□□□ 0.32
COL1A1-204ENST00000474644 NELFBQ8WX92 580 aa17.08■□□□□ 0.32
COL1A1-204ENST00000474644 RABGGTAQ92696 567 aa17.08■□□□□ 0.32
COL1A1-204ENST00000474644 IGSF21Q96ID5 467 aa17.08■□□□□ 0.32
COL1A1-204ENST00000474644 UROC1Q96N76 676 aa17.08■□□□□ 0.32
COL1A1-204ENST00000474644 GUCD1Q96NT3 240 aa17.08■□□□□ 0.32
COL1A1-204ENST00000474644 ALG13Q9NP73 1137 aaKnown RBP17.08■□□□□ 0.32
COL1A1-204ENST00000474644 FAN1Q9Y2M0 1017 aa17.08■□□□□ 0.32
COL1A1-204ENST00000474644 PDCD11Q14690 1871 aaKnown RBP17.07■□□□□ 0.32
COL1A1-204ENST00000474644 PTPRJQ12913 1337 aa17.07■□□□□ 0.32
COL1A1-204ENST00000474644 GRM6O15303 877 aa17.07■□□□□ 0.32
COL1A1-204ENST00000474644 XPOTO43592 962 aaKnown RBP17.07■□□□□ 0.32
COL1A1-204ENST00000474644 KIF4AO95239 1232 aa17.07■□□□□ 0.32
COL1A1-204ENST00000474644 CYP3A5P20815 502 aa17.07■□□□□ 0.32
COL1A1-204ENST00000474644 RPL13P26373 211 aaKnown RBP17.07■□□□□ 0.32
COL1A1-204ENST00000474644 CLCNKBP51801 687 aa17.07■□□□□ 0.32
COL1A1-204ENST00000474644 GUCY2FP51841 1108 aa17.07■□□□□ 0.32
COL1A1-204ENST00000474644 NLRP12P59046 1061 aa17.07■□□□□ 0.32
COL1A1-204ENST00000474644 PLCB3Q01970 1234 aa17.07■□□□□ 0.32
COL1A1-204ENST00000474644 ADAM9Q13443 819 aa17.07■□□□□ 0.32
COL1A1-204ENST00000474644 PSMD6Q15008 389 aa17.07■□□□□ 0.32
COL1A1-204ENST00000474644 SPATA1Q5VX52 437 aa17.07■□□□□ 0.32
COL1A1-204ENST00000474644 CEP135Q66GS9 1140 aa17.07■□□□□ 0.32
COL1A1-204ENST00000474644 NT5DC4Q86YG4 428 aa17.07■□□□□ 0.32
COL1A1-204ENST00000474644 ZC3H3Q8IXZ2 948 aaKnown RBP17.07■□□□□ 0.32
COL1A1-204ENST00000474644 MLKLQ8NB16 471 aa17.07■□□□□ 0.32
COL1A1-204ENST00000474644 SYAP1Q96A49 352 aaPredicted RBP17.07■□□□□ 0.32
COL1A1-204ENST00000474644 TMEM169Q96HH4 297 aa17.07■□□□□ 0.32
COL1A1-204ENST00000474644 FAM84AQ96KN4 292 aa17.07■□□□□ 0.32
COL1A1-204ENST00000474644 MFSD14AQ96MC6 490 aa17.07■□□□□ 0.32
COL1A1-204ENST00000474644 GZF1Q9H116 711 aaPredicted RBP17.07■□□□□ 0.32
COL1A1-204ENST00000474644 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.07■□□□□ 0.32
COL1A1-204ENST00000474644 ANK1P16157 1881 aa17.07■□□□□ 0.32
COL1A1-204ENST00000474644 BICDL2A1A5D9 508 aa17.06■□□□□ 0.32
COL1A1-204ENST00000474644 TULP1O00294 542 aaPredicted RBP17.06■□□□□ 0.32
COL1A1-204ENST00000474644 PODXLO00592 558 aa17.06■□□□□ 0.32
COL1A1-204ENST00000474644 AKAP3O75969 853 aa17.06■□□□□ 0.32
COL1A1-204ENST00000474644 DNAJB1P25685 340 aa17.06■□□□□ 0.32
COL1A1-204ENST00000474644 ADGRE1Q14246 886 aa17.06■□□□□ 0.32
COL1A1-204ENST00000474644 SURF1Q15526 300 aa17.06■□□□□ 0.32
COL1A1-204ENST00000474644 UPP1Q16831 310 aa17.06■□□□□ 0.32
COL1A1-204ENST00000474644 TTI2Q6NXR4 508 aa17.06■□□□□ 0.32
COL1A1-204ENST00000474644 FOXR2Q6PJQ5 311 aa17.06■□□□□ 0.32
COL1A1-204ENST00000474644 C3orf58Q8NDZ4 430 aa17.06■□□□□ 0.32
COL1A1-204ENST00000474644 BEST2Q8NFU1 509 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms