RNA–Protein interactions for RNA: ENST00000474586.5

TRA2A-204, Transcript of transformer 2 alpha homolog, humanhuman

TSL 3

Gene TRA2A, Length 868 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-204ENST00000474586 BRCC3P46736 316 aa23.21■■□□□ 1.31
TRA2A-204ENST00000474586 TMEM119Q4V9L6 283 aa23.21■■□□□ 1.31
TRA2A-204ENST00000474586 LIN9Q5TKA1 542 aa23.21■■□□□ 1.31
TRA2A-204ENST00000474586 GET4Q7L5D6 327 aaPredicted RBP23.21■■□□□ 1.31
TRA2A-204ENST00000474586 KCTD17Q8N5Z5 321 aa23.21■■□□□ 1.31
TRA2A-204ENST00000474586 TMEM105Q8N8V8 129 aa23.21■■□□□ 1.31
TRA2A-204ENST00000474586 C3orf58Q8NDZ4 430 aa23.21■■□□□ 1.31
TRA2A-204ENST00000474586 TMEM161BQ8NDZ6 487 aa23.21■■□□□ 1.31
TRA2A-204ENST00000474586 ZMAT2Q96NC0 199 aaKnown RBP23.21■■□□□ 1.31
TRA2A-204ENST00000474586 ACAP3Q96P50 834 aa23.21■■□□□ 1.31
TRA2A-204ENST00000474586 MFSD1Q9H3U5 465 aa23.21■■□□□ 1.31
TRA2A-204ENST00000474586 DUSP12Q9UNI6 340 aa23.21■■□□□ 1.31
TRA2A-204ENST00000474586 NARSO43776 548 aaKnown RBP23.2■■□□□ 1.3
TRA2A-204ENST00000474586 TKTP29401 623 aaKnown RBP23.2■■□□□ 1.3
TRA2A-204ENST00000474586 OR1D2P34982 312 aa23.2■■□□□ 1.3
TRA2A-204ENST00000474586 SMTNP53814 917 aa23.2■■□□□ 1.3
TRA2A-204ENST00000474586 CACNB1Q02641 598 aaPredicted RBP23.2■■□□□ 1.3
TRA2A-204ENST00000474586 STRN3Q13033 797 aa23.2■■□□□ 1.3
TRA2A-204ENST00000474586 RSPO2Q6UXX9 243 aaPredicted RBP23.2■■□□□ 1.3
TRA2A-204ENST00000474586 SNX27Q96L92 541 aa23.2■■□□□ 1.3
TRA2A-204ENST00000474586 MEFVO15553 781 aaPredicted RBP23.19■■□□□ 1.3
TRA2A-204ENST00000474586 C8AP07357 584 aa23.19■■□□□ 1.3
TRA2A-204ENST00000474586 MAPTP10636 758 aaKnown RBP23.19■■□□□ 1.3
TRA2A-204ENST00000474586 RAB33AQ14088 237 aa23.19■■□□□ 1.3
TRA2A-204ENST00000474586 SEZ6Q53EL9 994 aa23.19■■□□□ 1.3
TRA2A-204ENST00000474586 ARSHQ5FYA8 562 aa23.19■■□□□ 1.3
TRA2A-204ENST00000474586 PPM1LQ5SGD2 360 aa23.19■■□□□ 1.3
TRA2A-204ENST00000474586 ASTLQ6HA08 431 aaPredicted RBP23.19■■□□□ 1.3
TRA2A-204ENST00000474586 GRASPQ7Z6J2 395 aaPredicted RBP23.19■■□□□ 1.3
TRA2A-204ENST00000474586 DDX27Q96GQ7 796 aaKnown RBP23.19■■□□□ 1.3
TRA2A-204ENST00000474586 SLC38A7Q9NVC3 462 aa23.19■■□□□ 1.3
TRA2A-204ENST00000474586 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.19■■□□□ 1.3
TRA2A-204ENST00000474586 ANKFY1Q9P2R3 1169 aa23.19■■□□□ 1.3
TRA2A-204ENST00000474586 MTRRQ9UBK8 725 aa23.19■■□□□ 1.3
TRA2A-204ENST00000474586 KCNG1Q9UIX4 513 aa23.19■■□□□ 1.3
TRA2A-204ENST00000474586 FBXL21Q9UKT6 434 aa23.19■■□□□ 1.3
TRA2A-204ENST00000474586 MYH11P35749 1972 aa23.18■■□□□ 1.3
TRA2A-204ENST00000474586 CCL16O15467 120 aa23.18■■□□□ 1.3
TRA2A-204ENST00000474586 TRAPPC3O43617 180 aa23.18■■□□□ 1.3
TRA2A-204ENST00000474586 HNRNPA1P09651 372 aaKnown RBP eCLIP23.18■■□□□ 1.3
TRA2A-204ENST00000474586 LAMP2P13473 410 aa23.18■■□□□ 1.3
TRA2A-204ENST00000474586 KCNE1P15382 129 aa23.18■■□□□ 1.3
TRA2A-204ENST00000474586 FSHRP23945 695 aa23.18■■□□□ 1.3
TRA2A-204ENST00000474586 NTHL1P78549 312 aa23.18■■□□□ 1.3
TRA2A-204ENST00000474586 SLC44A3Q8N4M1 653 aa23.18■■□□□ 1.3
TRA2A-204ENST00000474586 FLCNQ8NFG4 579 aa23.18■■□□□ 1.3
TRA2A-204ENST00000474586 C18orf25Q96B23 403 aaPredicted RBP23.18■■□□□ 1.3
TRA2A-204ENST00000474586 FAM86C1Q9NVL1 165 aa23.18■■□□□ 1.3
TRA2A-204ENST00000474586 KCND2Q9NZV8 630 aa23.18■■□□□ 1.3
TRA2A-204ENST00000474586 CDY1Q9Y6F8 540 aa23.18■■□□□ 1.3
TRA2A-204ENST00000474586 DOCK8Q8NF50 2099 aa23.18■■□□□ 1.3
TRA2A-204ENST00000474586 DOCK6Q96HP0 2047 aa23.17■■□□□ 1.3
TRA2A-204ENST00000474586 H0Y858 1186 aa23.17■■□□□ 1.3
TRA2A-204ENST00000474586 PODXLO00592 558 aa23.17■■□□□ 1.3
TRA2A-204ENST00000474586 GALR2O43603 387 aaPredicted RBP23.17■■□□□ 1.3
TRA2A-204ENST00000474586 TOM1L1O75674 476 aa23.17■■□□□ 1.3
TRA2A-204ENST00000474586 UBA7P41226 1012 aa23.17■■□□□ 1.3
TRA2A-204ENST00000474586 NUBP1P53384 320 aa23.17■■□□□ 1.3
TRA2A-204ENST00000474586 DHX8Q14562 1220 aaKnown RBP23.17■■□□□ 1.3
TRA2A-204ENST00000474586 AXDND1Q5T1B0 1012 aaPredicted RBP23.17■■□□□ 1.3
TRA2A-204ENST00000474586 ST13P5Q8NFI4 369 aaPredicted RBP23.17■■□□□ 1.3
TRA2A-204ENST00000474586 SLC7A14Q8TBB6 771 aa23.17■■□□□ 1.3
TRA2A-204ENST00000474586 LRRC15Q8TF66 581 aa23.17■■□□□ 1.3
TRA2A-204ENST00000474586 AK8Q96MA6 479 aa23.17■■□□□ 1.3
TRA2A-204ENST00000474586 CNTN3Q9P232 1028 aa23.17■■□□□ 1.3
TRA2A-204ENST00000474586 POLIQ9UNA4 740 aa23.17■■□□□ 1.3
TRA2A-204ENST00000474586 BACE2Q9Y5Z0 518 aa23.17■■□□□ 1.3
TRA2A-204ENST00000474586 CFHP08603 1231 aa23.16■■□□□ 1.3
TRA2A-204ENST00000474586 NPR3P17342 541 aa23.16■■□□□ 1.3
TRA2A-204ENST00000474586 CLCN5P51795 746 aa23.16■■□□□ 1.3
TRA2A-204ENST00000474586 GRIN1Q05586 938 aa23.16■■□□□ 1.3
TRA2A-204ENST00000474586 NOLC1Q14978 699 aaKnown RBP eCLIP23.16■■□□□ 1.3
TRA2A-204ENST00000474586 SLC10A6Q3KNW5 377 aa23.16■■□□□ 1.3
TRA2A-204ENST00000474586 CWF19L1Q69YN2 538 aaKnown RBP23.16■■□□□ 1.3
TRA2A-204ENST00000474586 ANKS3Q6ZW76 656 aa23.16■■□□□ 1.3
TRA2A-204ENST00000474586 SIX5Q8N196 739 aa23.16■■□□□ 1.3
TRA2A-204ENST00000474586 ATOH1Q92858 354 aaPredicted RBP23.16■■□□□ 1.3
TRA2A-204ENST00000474586 CALML4Q96GE6 196 aa23.16■■□□□ 1.3
TRA2A-204ENST00000474586 CITO14578 2027 aa23.15■■□□□ 1.3
TRA2A-204ENST00000474586 CLDN3O15551 220 aa23.15■■□□□ 1.3
TRA2A-204ENST00000474586 SLC26A4O43511 780 aa23.15■■□□□ 1.3
TRA2A-204ENST00000474586 HOXA9P31269 272 aa23.15■■□□□ 1.3
TRA2A-204ENST00000474586 ZPBP2Q6X784 338 aa23.15■■□□□ 1.3
TRA2A-204ENST00000474586 BRAPQ7Z569 592 aa23.15■■□□□ 1.3
TRA2A-204ENST00000474586 GPBP1Q86WP2 473 aa23.15■■□□□ 1.3
TRA2A-204ENST00000474586 NXPE3Q969Y0 559 aa23.15■■□□□ 1.3
TRA2A-204ENST00000474586 REEP2Q9BRK0 252 aa23.15■■□□□ 1.3
TRA2A-204ENST00000474586 LARSQ9P2J5 1176 aaKnown RBP23.15■■□□□ 1.3
TRA2A-204ENST00000474586 ANHXE9PGG2 379 aa23.14■■□□□ 1.29
TRA2A-204ENST00000474586 PI15O43692 258 aa23.14■■□□□ 1.29
TRA2A-204ENST00000474586 XYLBO75191 536 aa23.14■■□□□ 1.29
TRA2A-204ENST00000474586 RPL9P32969 192 aaKnown RBP23.14■■□□□ 1.29
TRA2A-204ENST00000474586 MATR3P43243 847 aaKnown RBP eCLIP23.14■■□□□ 1.29
TRA2A-204ENST00000474586 NCKAP1LP55160 1127 aa23.14■■□□□ 1.29
TRA2A-204ENST00000474586 MCL1Q07820 350 aa23.14■■□□□ 1.29
TRA2A-204ENST00000474586 SF3A1Q15459 793 aaKnown RBP23.14■■□□□ 1.29
TRA2A-204ENST00000474586 UVSSAQ2YD98 709 aa23.14■■□□□ 1.29
TRA2A-204ENST00000474586 VARS2Q5ST30 1063 aaKnown RBP23.14■■□□□ 1.29
TRA2A-204ENST00000474586 HAUS6Q7Z4H7 955 aa23.14■■□□□ 1.29
TRA2A-204ENST00000474586 BICD1Q96G01 975 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms