RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 SMIM28A0A1B0GU29 152 aa20.34■□□□□ 0.85
CCDC171-206ENST00000474193 GOLGA6L22H0YM25 854 aa20.34■□□□□ 0.85
CCDC171-206ENST00000474193 K7ENM7 598 aa20.34■□□□□ 0.85
CCDC171-206ENST00000474193 B3GAT3O94766 335 aa20.34■□□□□ 0.85
CCDC171-206ENST00000474193 NCKAP1LP55160 1127 aa20.34■□□□□ 0.85
CCDC171-206ENST00000474193 HERC4Q5GLZ8 1057 aaPredicted RBP20.34■□□□□ 0.85
CCDC171-206ENST00000474193 GLRA4Q5JXX5 417 aa20.34■□□□□ 0.85
CCDC171-206ENST00000474193 TMC5Q6UXY8 1006 aa20.34■□□□□ 0.85
CCDC171-206ENST00000474193 PDILTQ8N807 584 aa20.34■□□□□ 0.85
CCDC171-206ENST00000474193 IQUBQ8NA54 791 aa20.34■□□□□ 0.85
CCDC171-206ENST00000474193 HASPINQ8TF76 798 aa20.34■□□□□ 0.85
CCDC171-206ENST00000474193 PPP1R10Q96QC0 940 aaKnown RBP20.34■□□□□ 0.85
CCDC171-206ENST00000474193 PLEKHA4Q9H4M7 779 aa20.34■□□□□ 0.85
CCDC171-206ENST00000474193 MUTYHQ9UIF7 546 aa20.34■□□□□ 0.85
CCDC171-206ENST00000474193 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.34■□□□□ 0.85
CCDC171-206ENST00000474193 F8W810 466 aa20.33■□□□□ 0.85
CCDC171-206ENST00000474193 EFEMP2O95967 443 aa20.33■□□□□ 0.85
CCDC171-206ENST00000474193 PROZP22891 400 aa20.33■□□□□ 0.85
CCDC171-206ENST00000474193 CYP26C1Q6V0L0 522 aa20.33■□□□□ 0.85
CCDC171-206ENST00000474193 PALB2Q86YC2 1186 aa20.33■□□□□ 0.85
CCDC171-206ENST00000474193 PLCD3Q8N3E9 789 aa20.33■□□□□ 0.85
CCDC171-206ENST00000474193 CEP120Q8N960 986 aa20.33■□□□□ 0.85
CCDC171-206ENST00000474193 ACSF2Q96CM8 615 aaPredicted RBP20.33■□□□□ 0.85
CCDC171-206ENST00000474193 ZBTB45Q96K62 511 aaPredicted RBP20.33■□□□□ 0.85
CCDC171-206ENST00000474193 PAAF1Q9BRP4 392 aa20.33■□□□□ 0.85
CCDC171-206ENST00000474193 MAN1C1Q9NR34 630 aa20.33■□□□□ 0.85
CCDC171-206ENST00000474193 KCNH3Q9ULD8 1083 aa20.33■□□□□ 0.85
CCDC171-206ENST00000474193 PRR33A8MZF0 331 aa20.32■□□□□ 0.84
CCDC171-206ENST00000474193 TMEM189-UBE2V1I3L0A0 370 aa20.32■□□□□ 0.84
CCDC171-206ENST00000474193 HNRNPDLO14979 420 aaKnown RBP20.32■□□□□ 0.84
CCDC171-206ENST00000474193 KIF4AO95239 1232 aa20.32■□□□□ 0.84
CCDC171-206ENST00000474193 RPL9P32969 192 aaKnown RBP20.32■□□□□ 0.84
CCDC171-206ENST00000474193 ZNF131P52739 623 aa20.32■□□□□ 0.84
CCDC171-206ENST00000474193 C15orf39Q6ZRI6 1047 aa20.32■□□□□ 0.84
CCDC171-206ENST00000474193 GPR149Q86SP6 731 aa20.32■□□□□ 0.84
CCDC171-206ENST00000474193 FSIP1Q8NA03 581 aa20.32■□□□□ 0.84
CCDC171-206ENST00000474193 B3GALT6Q96L58 329 aa20.32■□□□□ 0.84
CCDC171-206ENST00000474193 CUEDC2Q9H467 287 aa20.32■□□□□ 0.84
CCDC171-206ENST00000474193 POMKQ9H5K3 350 aa20.32■□□□□ 0.84
CCDC171-206ENST00000474193 PLEKHA5Q9HAU0 1116 aa20.32■□□□□ 0.84
CCDC171-206ENST00000474193 PIDD1Q9HB75 910 aa20.32■□□□□ 0.84
CCDC171-206ENST00000474193 CACNG4Q9UBN1 327 aa20.32■□□□□ 0.84
CCDC171-206ENST00000474193 TBX20Q9UMR3 447 aa20.32■□□□□ 0.84
CCDC171-206ENST00000474193 CCDC195A0A1B0GUA6 201 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 A0A1B0GVL5 298 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 POLR2DO15514 142 aaKnown RBP20.31■□□□□ 0.84
CCDC171-206ENST00000474193 CLTAP09496 248 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 KCNE1P15382 129 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 PFKFB1P16118 471 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 CLCNKBP51801 687 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 MCL1Q07820 350 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 NAB2Q15742 525 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 PSMD5Q16401 504 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 XKR4Q5GH76 650 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 ALKAL1Q6UXT8 129 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.31■□□□□ 0.84
CCDC171-206ENST00000474193 CLEC17AQ6ZS10 378 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 CCDC149Q6ZUS6 474 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 DYMQ7RTS9 669 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 GLYCTKQ8IVS8 523 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 CEP57L1Q8IYX8 460 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 PIK3R5Q8WYR1 880 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 KCNN1Q92952 543 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 DHX58Q96C10 678 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 SNX27Q96L92 541 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 LRRC27Q9C0I9 530 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 USTQ9Y2C2 406 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 HCN4Q9Y3Q4 1203 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 NUB1Q9Y5A7 615 aa20.31■□□□□ 0.84
CCDC171-206ENST00000474193 FAM86C2PA6NEL3 165 aa20.3■□□□□ 0.84
CCDC171-206ENST00000474193 XPOTO43592 962 aaKnown RBP20.3■□□□□ 0.84
CCDC171-206ENST00000474193 WEE2P0C1S8 567 aa20.3■□□□□ 0.84
CCDC171-206ENST00000474193 SP100P23497 879 aaPredicted RBP20.3■□□□□ 0.84
CCDC171-206ENST00000474193 SYKP43405 635 aa20.3■□□□□ 0.84
CCDC171-206ENST00000474193 UPP1Q16831 310 aa20.3■□□□□ 0.84
CCDC171-206ENST00000474193 OTOP3Q7RTS5 596 aa20.3■□□□□ 0.84
CCDC171-206ENST00000474193 TDRD5Q8NAT2 981 aaKnown RBP20.3■□□□□ 0.84
CCDC171-206ENST00000474193 CMASQ8NFW8 434 aaPredicted RBP20.3■□□□□ 0.84
CCDC171-206ENST00000474193 STAMQ92783 540 aa20.3■□□□□ 0.84
CCDC171-206ENST00000474193 EDAQ92838 391 aa20.3■□□□□ 0.84
CCDC171-206ENST00000474193 CCDC34Q96HJ3 373 aa20.3■□□□□ 0.84
CCDC171-206ENST00000474193 CNTN3Q9P232 1028 aa20.3■□□□□ 0.84
CCDC171-206ENST00000474193 SEL1LQ9UBV2 794 aa20.3■□□□□ 0.84
CCDC171-206ENST00000474193 USP25Q9UHP3 1055 aa20.3■□□□□ 0.84
CCDC171-206ENST00000474193 PRPF40AO75400 957 aaKnown RBP20.29■□□□□ 0.84
CCDC171-206ENST00000474193 GAP43P17677 238 aa20.29■□□□□ 0.84
CCDC171-206ENST00000474193 AMPD3Q01432 767 aa20.29■□□□□ 0.84
CCDC171-206ENST00000474193 RTP2Q5QGT7 225 aa20.29■□□□□ 0.84
CCDC171-206ENST00000474193 SLFN12LQ6IEE8 588 aa20.29■□□□□ 0.84
CCDC171-206ENST00000474193 KANK3Q6NY19 840 aa20.29■□□□□ 0.84
CCDC171-206ENST00000474193 PRSS55Q6UWB4 352 aaPredicted RBP20.29■□□□□ 0.84
CCDC171-206ENST00000474193 ANKS3Q6ZW76 656 aa20.29■□□□□ 0.84
CCDC171-206ENST00000474193 KREMEN2Q8NCW0 462 aa20.29■□□□□ 0.84
CCDC171-206ENST00000474193 DDX12PQ92771 950 aa20.29■□□□□ 0.84
CCDC171-206ENST00000474193 TSPAN18Q96SJ8 248 aa20.29■□□□□ 0.84
CCDC171-206ENST00000474193 CXCL16Q9H2A7 254 aa20.29■□□□□ 0.84
CCDC171-206ENST00000474193 RPF1Q9H9Y2 349 aaKnown RBP20.29■□□□□ 0.84
CCDC171-206ENST00000474193 MAGEF1Q9HAY2 307 aa20.29■□□□□ 0.84
CCDC171-206ENST00000474193 MUC3AQ02505 3323 aa20.28■□□□□ 0.84
CCDC171-206ENST00000474193 CITO14578 2027 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms