RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 STRN3Q13033 797 aa19.76■□□□□ 0.75
SNX4-204ENST00000473417 TUSC3Q13454 348 aa19.76■□□□□ 0.75
SNX4-204ENST00000473417 NAB2Q15742 525 aa19.76■□□□□ 0.75
SNX4-204ENST00000473417 DCAF4L1Q3SXM0 396 aa19.76■□□□□ 0.75
SNX4-204ENST00000473417 ATAT1Q5SQI0 421 aa19.76■□□□□ 0.75
SNX4-204ENST00000473417 TMC5Q6UXY8 1006 aa19.76■□□□□ 0.75
SNX4-204ENST00000473417 HAUS6Q7Z4H7 955 aa19.76■□□□□ 0.75
SNX4-204ENST00000473417 GPR149Q86SP6 731 aa19.76■□□□□ 0.75
SNX4-204ENST00000473417 SFR1Q86XK3 245 aa19.76■□□□□ 0.75
SNX4-204ENST00000473417 GPR65Q8IYL9 337 aa19.76■□□□□ 0.75
SNX4-204ENST00000473417 PAAF1Q9BRP4 392 aa19.76■□□□□ 0.75
SNX4-204ENST00000473417 TARS2Q9BW92 718 aaKnown RBP19.76■□□□□ 0.75
SNX4-204ENST00000473417 MRPL4Q9BYD3 311 aaKnown RBP19.76■□□□□ 0.75
SNX4-204ENST00000473417 GPR62Q9BZJ7 368 aa19.76■□□□□ 0.75
SNX4-204ENST00000473417 LRRC27Q9C0I9 530 aa19.76■□□□□ 0.75
SNX4-204ENST00000473417 CACNG4Q9UBN1 327 aa19.76■□□□□ 0.75
SNX4-204ENST00000473417 SERTAD1Q9UHV2 236 aa19.76■□□□□ 0.75
SNX4-204ENST00000473417 ZDBF2Q9HCK1 2354 aa19.75■□□□□ 0.75
SNX4-204ENST00000473417 A0A1W2PQ27 194 aa19.75■□□□□ 0.75
SNX4-204ENST00000473417 A0A1W2PQ64 194 aa19.75■□□□□ 0.75
SNX4-204ENST00000473417 A0A1W2PQD8 194 aa19.75■□□□□ 0.75
SNX4-204ENST00000473417 H0YCG3 227 aa19.75■□□□□ 0.75
SNX4-204ENST00000473417 NMT1P30419 496 aaKnown RBP19.75■□□□□ 0.75
SNX4-204ENST00000473417 AMPD3Q01432 767 aa19.75■□□□□ 0.75
SNX4-204ENST00000473417 HSP90AA2PQ14568 343 aaPredicted RBP19.75■□□□□ 0.75
SNX4-204ENST00000473417 USP41Q3LFD5 358 aa19.75■□□□□ 0.75
SNX4-204ENST00000473417 C15orf39Q6ZRI6 1047 aa19.75■□□□□ 0.75
SNX4-204ENST00000473417 CEP57L1Q8IYX8 460 aa19.75■□□□□ 0.75
SNX4-204ENST00000473417 FSIP1Q8NA03 581 aa19.75■□□□□ 0.75
SNX4-204ENST00000473417 RABGGTAQ92696 567 aa19.75■□□□□ 0.75
SNX4-204ENST00000473417 ACO2Q99798 780 aaKnown RBP19.75■□□□□ 0.75
SNX4-204ENST00000473417 PYM1Q9BRP8 204 aaKnown RBP19.75■□□□□ 0.75
SNX4-204ENST00000473417 CXCL16Q9H2A7 254 aa19.75■□□□□ 0.75
SNX4-204ENST00000473417 MAN1C1Q9NR34 630 aa19.75■□□□□ 0.75
SNX4-204ENST00000473417 TBC1D7Q9P0N9 293 aa19.75■□□□□ 0.75
SNX4-204ENST00000473417 HPSEQ9Y251 543 aa19.75■□□□□ 0.75
SNX4-204ENST00000473417 USTQ9Y2C2 406 aa19.75■□□□□ 0.75
SNX4-204ENST00000473417 SPDYE4A6NLX3 237 aa19.74■□□□□ 0.75
SNX4-204ENST00000473417 GLUD1P00367 558 aa19.74■□□□□ 0.75
SNX4-204ENST00000473417 THP07101 528 aa19.74■□□□□ 0.75
SNX4-204ENST00000473417 SYKP43405 635 aa19.74■□□□□ 0.75
SNX4-204ENST00000473417 AFMP43652 599 aa19.74■□□□□ 0.75
SNX4-204ENST00000473417 NDUFA8P51970 172 aa19.74■□□□□ 0.75
SNX4-204ENST00000473417 ZDHHC14Q8IZN3 488 aa19.74■□□□□ 0.75
SNX4-204ENST00000473417 TDRD5Q8NAT2 981 aaKnown RBP19.74■□□□□ 0.75
SNX4-204ENST00000473417 CMASQ8NFW8 434 aaPredicted RBP19.74■□□□□ 0.75
SNX4-204ENST00000473417 ASIC4Q96FT7 647 aa19.74■□□□□ 0.75
SNX4-204ENST00000473417 B3GALT6Q96L58 329 aa19.74■□□□□ 0.75
SNX4-204ENST00000473417 FIZ1Q96SL8 496 aa19.74■□□□□ 0.75
SNX4-204ENST00000473417 TRIM9Q9C026 710 aa19.74■□□□□ 0.75
SNX4-204ENST00000473417 GOLPH3LQ9H4A5 285 aa19.74■□□□□ 0.75
SNX4-204ENST00000473417 MAGEF1Q9HAY2 307 aa19.74■□□□□ 0.75
SNX4-204ENST00000473417 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.74■□□□□ 0.75
SNX4-204ENST00000473417 PANK4Q9NVE7 773 aa19.74■□□□□ 0.75
SNX4-204ENST00000473417 TNFSF13BQ9Y275 285 aa19.74■□□□□ 0.75
SNX4-204ENST00000473417 SF3B1O75533 1304 aaKnown RBP eCLIP19.74■□□□□ 0.757e-7■■■■■ 63.1
SNX4-204ENST00000473417 GOLGA6L4A6NEF3 574 aa19.73■□□□□ 0.75
SNX4-204ENST00000473417 CASTOR2A6NHX0 329 aa19.73■□□□□ 0.75
SNX4-204ENST00000473417 KIF4AO95239 1232 aa19.73■□□□□ 0.75
SNX4-204ENST00000473417 C1RP00736 705 aa19.73■□□□□ 0.75
SNX4-204ENST00000473417 SLFN14P0C7P3 912 aa19.73■□□□□ 0.75
SNX4-204ENST00000473417 GAP43P17677 238 aa19.73■□□□□ 0.75
SNX4-204ENST00000473417 CASP1P29466 404 aa19.73■□□□□ 0.75
SNX4-204ENST00000473417 ZC2HC1CQ53FD0 456 aaPredicted RBP19.73■□□□□ 0.75
SNX4-204ENST00000473417 ZBTB33Q86T24 672 aa19.73■□□□□ 0.75
SNX4-204ENST00000473417 GRAMD1CQ8IYS0 662 aa19.73■□□□□ 0.75
SNX4-204ENST00000473417 PBXIP1Q96AQ6 731 aa19.73■□□□□ 0.75
SNX4-204ENST00000473417 BLZF1Q9H2G9 400 aa19.73■□□□□ 0.75
SNX4-204ENST00000473417 FNIP2Q9P278 1114 aa19.73■□□□□ 0.75
SNX4-204ENST00000473417 DPP7Q9UHL4 492 aa19.73■□□□□ 0.75
SNX4-204ENST00000473417 TBX20Q9UMR3 447 aa19.73■□□□□ 0.75
SNX4-204ENST00000473417 GDAQ9Y2T3 454 aa19.73■□□□□ 0.75
SNX4-204ENST00000473417 FAM237AA0A1B0GTK4 181 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 ACTN4O43707 911 aaKnown RBP19.72■□□□□ 0.75
SNX4-204ENST00000473417 TADA2AO75478 443 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 ASIC1P78348 528 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 RTP2Q5QGT7 225 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 ELMSAN1Q6PJG2 1045 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 CCDC149Q6ZUS6 474 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 ZNF720Q7Z2F6 126 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 CCDC65Q8IXS2 484 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 KREMEN2Q8NCW0 462 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 HASPINQ8TF76 798 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 HDAC7Q8WUI4 952 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 RIN2Q8WYP3 895 aaPredicted RBP19.72■□□□□ 0.75
SNX4-204ENST00000473417 BICD1Q96G01 975 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 DOCK6Q96HP0 2047 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 ZBTB45Q96K62 511 aaPredicted RBP19.72■□□□□ 0.75
SNX4-204ENST00000473417 C7orf25Q9BPX7 421 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 TCHPQ9BT92 498 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 RHOBTB2Q9BYZ6 727 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 MRPL44Q9H9J2 332 aaKnown RBP19.72■□□□□ 0.75
SNX4-204ENST00000473417 PTPRHQ9HD43 1115 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 SEL1LQ9UBV2 794 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 SORCS3Q9UPU3 1222 aa19.72■□□□□ 0.75
SNX4-204ENST00000473417 FRMD3A2A2Y4 597 aa19.71■□□□□ 0.75
SNX4-204ENST00000473417 PAPLNO95428 1278 aa19.71■□□□□ 0.75
SNX4-204ENST00000473417 GTF2BQ00403 316 aa19.71■□□□□ 0.75
SNX4-204ENST00000473417 CREMQ03060 361 aa19.71■□□□□ 0.75
SNX4-204ENST00000473417 MTMR3Q13615 1198 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms