RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 POMKQ9H5K3 350 aa21.22■□□□□ 0.99
COMMD1-208ENST00000472729 MRPL44Q9H9J2 332 aaKnown RBP21.22■□□□□ 0.99
COMMD1-208ENST00000472729 MORC2Q9Y6X9 1032 aaPredicted RBP21.22■□□□□ 0.99
COMMD1-208ENST00000472729 CCDC195A0A1B0GUA6 201 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 PRR33A8MZF0 331 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 TMEM189-UBE2V1I3L0A0 370 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 TULP1O00294 542 aaPredicted RBP21.21■□□□□ 0.99
COMMD1-208ENST00000472729 PODXLO00592 558 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 XPOTO43592 962 aaKnown RBP21.21■□□□□ 0.99
COMMD1-208ENST00000472729 EFEMP2O95967 443 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 C1RP00736 705 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 SPATA31D3P0C874 917 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 MYBP10242 640 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 IDEP14735 1019 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 KCNE1P15382 129 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 GAP43P17677 238 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 PPP2R3AQ06190 1150 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 NAB2Q15742 525 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 UPP1Q16831 310 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 FOXD4L6Q3SYB3 417 aaPredicted RBP21.21■□□□□ 0.99
COMMD1-208ENST00000472729 SEZ6Q53EL9 994 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 RTP2Q5QGT7 225 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 LIN9Q5TKA1 542 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 KANK3Q6NY19 840 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 PRSS55Q6UWB4 352 aaPredicted RBP21.21■□□□□ 0.99
COMMD1-208ENST00000472729 ALKAL1Q6UXT8 129 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 CYP26C1Q6V0L0 522 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 FOXD4L3Q6VB84 417 aaPredicted RBP21.21■□□□□ 0.99
COMMD1-208ENST00000472729 SPATA31D4Q6ZUB0 917 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 PLCD3Q8N3E9 789 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 LINC00301Q8NCQ3 95 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 PIK3R5Q8WYR1 880 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 STAMQ92783 540 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 MSTO1Q9BUK6 570 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 CXCL16Q9H2A7 254 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 RPF1Q9H9Y2 349 aaKnown RBP21.21■□□□□ 0.99
COMMD1-208ENST00000472729 GOLGA2P5Q9HBQ8 144 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 CNTN3Q9P232 1028 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 SEL1LQ9UBV2 794 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 EXOC7Q9UPT5 735 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 HCN4Q9Y3Q4 1203 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 BDP1A6H8Y1 2624 aa21.21■□□□□ 0.99
COMMD1-208ENST00000472729 TGM5O43548 720 aa21.2■□□□□ 0.98
COMMD1-208ENST00000472729 PPP6R2O75170 966 aa21.2■□□□□ 0.98
COMMD1-208ENST00000472729 RPL17P18621 184 aaKnown RBP21.2■□□□□ 0.98
COMMD1-208ENST00000472729 XKR4Q5GH76 650 aa21.2■□□□□ 0.98
COMMD1-208ENST00000472729 SLFN12LQ6IEE8 588 aa21.2■□□□□ 0.98
COMMD1-208ENST00000472729 OTOP3Q7RTS5 596 aa21.2■□□□□ 0.98
COMMD1-208ENST00000472729 PDILTQ8N807 584 aa21.2■□□□□ 0.98
COMMD1-208ENST00000472729 FAM212AQ96EL1 285 aa21.2■□□□□ 0.98
COMMD1-208ENST00000472729 CDH22Q9UJ99 828 aa21.2■□□□□ 0.98
COMMD1-208ENST00000472729 CFAP45Q9UL16 551 aa21.2■□□□□ 0.98
COMMD1-208ENST00000472729 ABLIM1O14639 778 aa21.19■□□□□ 0.98
COMMD1-208ENST00000472729 YEATS4O95619 227 aa21.19■□□□□ 0.98
COMMD1-208ENST00000472729 NMT1P30419 496 aaKnown RBP21.19■□□□□ 0.98
COMMD1-208ENST00000472729 GTF2BQ00403 316 aa21.19■□□□□ 0.98
COMMD1-208ENST00000472729 AMPD3Q01432 767 aa21.19■□□□□ 0.98
COMMD1-208ENST00000472729 ANKS3Q6ZW76 656 aa21.19■□□□□ 0.98
COMMD1-208ENST00000472729 KREMEN2Q8NCW0 462 aa21.19■□□□□ 0.98
COMMD1-208ENST00000472729 CMASQ8NFW8 434 aaPredicted RBP21.19■□□□□ 0.98
COMMD1-208ENST00000472729 KCNG4Q8TDN1 519 aa21.19■□□□□ 0.98
COMMD1-208ENST00000472729 LRRC15Q8TF66 581 aa21.19■□□□□ 0.98
COMMD1-208ENST00000472729 EDAQ92838 391 aa21.19■□□□□ 0.98
COMMD1-208ENST00000472729 KIF12Q96FN5 646 aa21.19■□□□□ 0.98
COMMD1-208ENST00000472729 USTQ9Y2C2 406 aa21.19■□□□□ 0.98
COMMD1-208ENST00000472729 OGTO15294 1046 aa21.18■□□□□ 0.98
COMMD1-208ENST00000472729 F13A1P00488 732 aa21.18■□□□□ 0.98
COMMD1-208ENST00000472729 CXCL8P10145 99 aa21.18■□□□□ 0.98
COMMD1-208ENST00000472729 ME1P48163 572 aa21.18■□□□□ 0.98
COMMD1-208ENST00000472729 SLC10A6Q3KNW5 377 aa21.18■□□□□ 0.98
COMMD1-208ENST00000472729 ATL3Q6DD88 541 aa21.18■□□□□ 0.98
COMMD1-208ENST00000472729 ADALQ6DHV7 355 aa21.18■□□□□ 0.98
COMMD1-208ENST00000472729 SFR1Q86XK3 245 aa21.18■□□□□ 0.98
COMMD1-208ENST00000472729 MAP4K3Q8IVH8 894 aa21.18■□□□□ 0.98
COMMD1-208ENST00000472729 LNX1Q8TBB1 728 aaPredicted RBP21.18■□□□□ 0.98
COMMD1-208ENST00000472729 SMG7Q92540 1137 aaKnown RBP21.18■□□□□ 0.98
COMMD1-208ENST00000472729 KCNN1Q92952 543 aa21.18■□□□□ 0.98
COMMD1-208ENST00000472729 ZMAT2Q96NC0 199 aaKnown RBP21.18■□□□□ 0.98
COMMD1-208ENST00000472729 ZDHHC7Q9NXF8 308 aa21.18■□□□□ 0.98
COMMD1-208ENST00000472729 PCDHB13Q9Y5F0 798 aa21.18■□□□□ 0.98
COMMD1-208ENST00000472729 CUTAO60888 179 aa21.17■□□□□ 0.98
COMMD1-208ENST00000472729 GCNT3O95395 438 aa21.17■□□□□ 0.98
COMMD1-208ENST00000472729 PIGRP01833 764 aa21.17■□□□□ 0.98
COMMD1-208ENST00000472729 FGFR3P22607 806 aa21.17■□□□□ 0.98
COMMD1-208ENST00000472729 MCM4P33991 863 aa21.17■□□□□ 0.98
COMMD1-208ENST00000472729 POSTNQ15063 836 aa21.17■□□□□ 0.98
COMMD1-208ENST00000472729 ZC2HC1CQ53FD0 456 aaPredicted RBP21.17■□□□□ 0.98
COMMD1-208ENST00000472729 STXBP4Q6ZWJ1 553 aa21.17■□□□□ 0.98
COMMD1-208ENST00000472729 ZNF720Q7Z2F6 126 aa21.17■□□□□ 0.98
COMMD1-208ENST00000472729 CD302Q8IX05 232 aa21.17■□□□□ 0.98
COMMD1-208ENST00000472729 CCDC65Q8IXS2 484 aa21.17■□□□□ 0.98
COMMD1-208ENST00000472729 SYCP3Q8IZU3 236 aa21.17■□□□□ 0.98
COMMD1-208ENST00000472729 IQUBQ8NA54 791 aa21.17■□□□□ 0.98
COMMD1-208ENST00000472729 C18orf25Q96B23 403 aaPredicted RBP21.17■□□□□ 0.98
COMMD1-208ENST00000472729 HVCN1Q96D96 273 aa21.17■□□□□ 0.98
COMMD1-208ENST00000472729 TSPAN18Q96SJ8 248 aa21.17■□□□□ 0.98
COMMD1-208ENST00000472729 CUEDC2Q9H467 287 aa21.17■□□□□ 0.98
COMMD1-208ENST00000472729 ST6GALNAC4Q9H4F1 302 aa21.17■□□□□ 0.98
COMMD1-208ENST00000472729 FAM13BQ9NYF5 915 aa21.17■□□□□ 0.98
COMMD1-208ENST00000472729 TBC1D7Q9P0N9 293 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms