RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 UBXN2BQ14CS0 331 aa6.49□□□□□ -1.37
CD46-213ENST00000471987 CCDC142Q17RM4 750 aa6.49□□□□□ -1.37
CD46-213ENST00000471987 PRR16Q569H4 304 aa6.49□□□□□ -1.37
CD46-213ENST00000471987 CASKIN2Q8WXE0 1202 aa6.49□□□□□ -1.37
CD46-213ENST00000471987 STON2Q8WXE9 905 aa6.49□□□□□ -1.37
CD46-213ENST00000471987 CYFIP2Q96F07 1278 aa6.49□□□□□ -1.37
CD46-213ENST00000471987 BBC3Q96PG8 261 aaPredicted RBP6.49□□□□□ -1.37
CD46-213ENST00000471987 ALOXE3Q9BYJ1 711 aa6.49□□□□□ -1.37
CD46-213ENST00000471987 TESQ9UGI8 421 aaKnown RBP6.49□□□□□ -1.37
CD46-213ENST00000471987 INSL6Q9Y581 213 aa6.49□□□□□ -1.37
CD46-213ENST00000471987 CLSTN1O94985 981 aa6.48□□□□□ -1.37
CD46-213ENST00000471987 GSPT1P15170 499 aaKnown RBP6.48□□□□□ -1.37
CD46-213ENST00000471987 FDXRP22570 491 aa6.48□□□□□ -1.37
CD46-213ENST00000471987 CXCR5P32302 372 aa6.48□□□□□ -1.37
CD46-213ENST00000471987 GPR3P46089 330 aa6.48□□□□□ -1.37
CD46-213ENST00000471987 ALDH1A3P47895 512 aa6.48□□□□□ -1.37
CD46-213ENST00000471987 OCA2Q04671 838 aa6.48□□□□□ -1.37
CD46-213ENST00000471987 MGAT2Q10469 447 aa6.48□□□□□ -1.37
CD46-213ENST00000471987 B3GNTL1Q67FW5 361 aaPredicted RBP6.48□□□□□ -1.37
CD46-213ENST00000471987 FAM43AQ8N2R8 423 aa6.48□□□□□ -1.37
CD46-213ENST00000471987 LDAHQ9H6V9 325 aa6.48□□□□□ -1.37
CD46-213ENST00000471987 CCM2LQ9NUG4 571 aaPredicted RBP6.48□□□□□ -1.37
CD46-213ENST00000471987 AJAP1Q9UKB5 411 aaPredicted RBP6.48□□□□□ -1.37
CD46-213ENST00000471987 MAST3O60307 1309 aa6.48□□□□□ -1.37
CD46-213ENST00000471987 GPR39O43194 453 aa6.47□□□□□ -1.37
CD46-213ENST00000471987 GCSHP23434 173 aa6.47□□□□□ -1.37
CD46-213ENST00000471987 MPLP40238 635 aa6.47□□□□□ -1.37
CD46-213ENST00000471987 MTNR1BP49286 362 aa6.47□□□□□ -1.37
CD46-213ENST00000471987 MRPS21P82921 87 aaKnown RBP6.47□□□□□ -1.37
CD46-213ENST00000471987 SCAPQ12770 1279 aa6.47□□□□□ -1.37
CD46-213ENST00000471987 ZNF529Q6P280 563 aa6.47□□□□□ -1.37
CD46-213ENST00000471987 GIMAP6Q6P9H5 292 aa6.47□□□□□ -1.37
CD46-213ENST00000471987 SYCE2Q6PIF2 218 aa6.47□□□□□ -1.37
CD46-213ENST00000471987 KRT26Q7Z3Y9 468 aa6.47□□□□□ -1.37
CD46-213ENST00000471987 SPATS2Q86XZ4 545 aaKnown RBP6.47□□□□□ -1.37
CD46-213ENST00000471987 SLC44A3Q8N4M1 653 aa6.47□□□□□ -1.37
CD46-213ENST00000471987 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.47□□□□□ -1.37
CD46-213ENST00000471987 WDR66Q8TBY9 1149 aa6.47□□□□□ -1.37
CD46-213ENST00000471987 FUBP1Q96AE4 644 aaKnown RBP6.47□□□□□ -1.37
CD46-213ENST00000471987 RNF31Q96EP0 1072 aa6.47□□□□□ -1.37
CD46-213ENST00000471987 BOD1Q96IK1 185 aa6.47□□□□□ -1.37
CD46-213ENST00000471987 ZSWIM1Q9BR11 485 aa6.47□□□□□ -1.37
CD46-213ENST00000471987 GALNT9Q9HCQ5 603 aa6.47□□□□□ -1.37
CD46-213ENST00000471987 COX11Q9Y6N1 276 aa6.47□□□□□ -1.37
CD46-213ENST00000471987 FAM171A2A8MVW0 826 aa6.46□□□□□ -1.38
CD46-213ENST00000471987 MASP2O00187 686 aa6.46□□□□□ -1.38
CD46-213ENST00000471987 PRKD3O94806 890 aa6.46□□□□□ -1.38
CD46-213ENST00000471987 FGFR4P22455 802 aa6.46□□□□□ -1.38
CD46-213ENST00000471987 CD38P28907 300 aa6.46□□□□□ -1.38
CD46-213ENST00000471987 CNGA1P29973 690 aa6.46□□□□□ -1.38
CD46-213ENST00000471987 CXADRP78310 365 aa6.46□□□□□ -1.38
CD46-213ENST00000471987 FOXR2Q6PJQ5 311 aa6.46□□□□□ -1.38
CD46-213ENST00000471987 SEM1Q6ZVN7 128 aa6.46□□□□□ -1.38
CD46-213ENST00000471987 GPR149Q86SP6 731 aa6.46□□□□□ -1.38
CD46-213ENST00000471987 TMEM74BQ9NUR3 256 aa6.46□□□□□ -1.38
CD46-213ENST00000471987 TBCCD1Q9NVR7 557 aa6.46□□□□□ -1.38
CD46-213ENST00000471987 KCNE5Q9UJ90 142 aa6.46□□□□□ -1.38
CD46-213ENST00000471987 SIK3Q9Y2K2 1263 aa6.46□□□□□ -1.38
CD46-213ENST00000471987 PCDHGA2Q9Y5H1 932 aa6.46□□□□□ -1.38
CD46-213ENST00000471987 GPR32O75388 356 aa6.45□□□□□ -1.38
CD46-213ENST00000471987 GPANK1O95872 356 aa6.45□□□□□ -1.38
CD46-213ENST00000471987 VIL1P09327 827 aaKnown RBP6.45□□□□□ -1.38
CD46-213ENST00000471987 ALAS1P13196 640 aa6.45□□□□□ -1.38
CD46-213ENST00000471987 OSMP13725 252 aa6.45□□□□□ -1.38
CD46-213ENST00000471987 FPR1P21462 350 aa6.45□□□□□ -1.38
CD46-213ENST00000471987 SEPT2Q15019 361 aa6.45□□□□□ -1.38
CD46-213ENST00000471987 RNF219Q5W0B1 726 aaPredicted RBP6.45□□□□□ -1.38
CD46-213ENST00000471987 LHFPL2Q6ZUX7 228 aa6.45□□□□□ -1.38
CD46-213ENST00000471987 RD3Q7Z3Z2 195 aa6.45□□□□□ -1.38
CD46-213ENST00000471987 SIMC1Q8NDZ2 872 aa6.45□□□□□ -1.38
CD46-213ENST00000471987 NTN5Q8WTR8 489 aaPredicted RBP6.45□□□□□ -1.38
CD46-213ENST00000471987 NELL1Q92832 810 aa6.45□□□□□ -1.38
CD46-213ENST00000471987 Q96MF0 132 aa6.45□□□□□ -1.38
CD46-213ENST00000471987 MANSC1Q9H8J5 431 aa6.45□□□□□ -1.38
CD46-213ENST00000471987 SLC23A1Q9UHI7 598 aa6.45□□□□□ -1.38
CD46-213ENST00000471987 GPR45Q9Y5Y3 372 aa6.45□□□□□ -1.38
CD46-213ENST00000471987 ACTL7AQ9Y615 435 aa6.45□□□□□ -1.38
CD46-213ENST00000471987 WASHC2AQ641Q2 1341 aa6.45□□□□□ -1.38
CD46-213ENST00000471987 SLC6A2P23975 617 aa6.44□□□□□ -1.38
CD46-213ENST00000471987 PCSK1P29120 753 aa6.44□□□□□ -1.38
CD46-213ENST00000471987 PLA2G5P39877 138 aa6.44□□□□□ -1.38
CD46-213ENST00000471987 SLC6A9P48067 706 aa6.44□□□□□ -1.38
CD46-213ENST00000471987 C21orf58P58505 322 aa6.44□□□□□ -1.38
CD46-213ENST00000471987 HSD11B2P80365 405 aa6.44□□□□□ -1.38
CD46-213ENST00000471987 FBXO42Q6P3S6 717 aa6.44□□□□□ -1.38
CD46-213ENST00000471987 CAGE1Q8TC20 777 aa6.44□□□□□ -1.38
CD46-213ENST00000471987 CCHCR1Q8TD31 782 aa6.44□□□□□ -1.38
CD46-213ENST00000471987 R3HDMLQ9H3Y0 253 aa6.44□□□□□ -1.38
CD46-213ENST00000471987 PRDM13Q9H4Q3 707 aa6.44□□□□□ -1.38
CD46-213ENST00000471987 FBXO34Q9NWN3 711 aa6.44□□□□□ -1.38
CD46-213ENST00000471987 DNM3Q9UQ16 869 aa6.44□□□□□ -1.38
CD46-213ENST00000471987 SPATA31A6Q5VVP1 1343 aa6.44□□□□□ -1.38
CD46-213ENST00000471987 AATKQ6ZMQ8 1374 aa6.44□□□□□ -1.38
CD46-213ENST00000471987 CKBP12277 381 aa6.43□□□□□ -1.38
CD46-213ENST00000471987 ELLP55199 621 aaPredicted RBP6.43□□□□□ -1.38
CD46-213ENST00000471987 Q6ZNX1 250 aa6.43□□□□□ -1.38
CD46-213ENST00000471987 UBE3BQ7Z3V4 1068 aa6.43□□□□□ -1.38
CD46-213ENST00000471987 MYOCQ99972 504 aa6.43□□□□□ -1.38
CD46-213ENST00000471987 TMX1Q9H3N1 280 aa6.43□□□□□ -1.38
CD46-213ENST00000471987 CASS4Q9NQ75 786 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms