RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 NSUN7Q8NE18 718 aaKnown RBP13.94□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 CLMNQ96JQ2 1002 aa13.94□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 NDEL1Q9GZM8 345 aa13.94□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ZNF556Q9HAH1 456 aa13.94□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 FBXO40Q9UH90 709 aa13.94□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 SYNPO2Q9UMS6 1093 aa13.94□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 PCDHB8Q9UN66 801 aa13.94□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 PCDHB7Q9Y5E2 793 aa13.94□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ZBTB5O15062 677 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TIPRLO75663 272 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ZFXP17010 805 aaPredicted RBP13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ALDH1A3P47895 512 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 SYNGAP1Q96PV0 1343 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 QARSP47897 775 aaKnown RBP13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ACOT2P49753 483 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 MAGOHP61326 146 aaKnown RBP13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ZBED6P86452 979 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TOMM20Q15388 145 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ESRP1Q6NXG1 681 aaKnown RBP13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 BTN2A1Q7KYR7 527 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 MTMR2Q13614 643 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 CUL4AQ13619 759 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 HLFQ16534 295 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 CLEC4FQ8N1N0 589 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 UGGT2Q9NYU1 1516 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 SH2B2O14492 632 aaPredicted RBP13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 KLHL18O94889 574 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TCN1P20061 433 aaPredicted RBP13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ALDH18A1P54886 795 aaKnown RBP13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 PAN2Q504Q3 1202 aaKnown RBP13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 PTRHD1Q6GMV3 140 aaKnown RBP13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 SLC25A24Q6NUK1 477 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 SH3BP5LQ7L8J4 393 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ZSCAN18Q8TBC5 510 aaPredicted RBP13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 A0A0G2JLW4 131 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 CCNE1P24864 410 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 SHROOM1Q2M3G4 852 aaPredicted RBP13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 AGO2Q9UKV8 859 aaKnown RBP13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 PAIP2BQ9ULR5 123 aaKnown RBP13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 SRPRBQ9Y5M8 271 aaKnown RBP13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 APOL1O14791 398 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 EIF3DO15371 548 aaKnown RBP eCLIP13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 BTKQ06187 659 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 WDR72Q3MJ13 1102 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 VPS37AQ8NEZ2 397 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 SLC30A5Q8TAD4 765 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 MRPS26Q9BYN8 205 aaKnown RBP13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 GPR63Q9BZJ6 419 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 SNX9Q9Y5X1 595 aa13.93□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ANKS6Q68DC2 871 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TSSK1BQ9BXA7 367 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ICE1Q9Y2F5 2266 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 P4HA2O15460 535 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 MTRF1O75570 445 aaKnown RBP13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 CHRNA5P30532 468 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ACTR2P61160 394 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TADA1Q96BN2 335 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 EML4Q9HC35 981 aaKnown RBP13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 CD274Q9NZQ7 290 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ZFATQ9P243 1243 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 MZF1P28698 734 aaPredicted RBP13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TIGD7Q6NT04 549 aaPredicted RBP13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TTC13Q8NBP0 860 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 PLEKHA5Q9HAU0 1116 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 MAP3K13O43283 966 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 FLCNQ8NFG4 579 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 PARD6BQ9BYG5 372 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 EPN3Q9H201 632 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 THAP9Q9H5L6 903 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ANGPT2O15123 496 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 KDSRQ06136 332 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ADCK1Q86TW2 530 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 PIGBQ92521 554 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TMEM143Q96AN5 459 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 C2orf40Q9H1Z8 148 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ECT2Q9H8V3 914 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ENDOD1O94919 500 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ARSEP51690 589 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 RPS6P62753 249 aaKnown RBP13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 DRAP1Q14919 205 aaPredicted RBP13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 SHCBP1Q8NEM2 672 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 LSG1Q9H089 658 aaKnown RBP13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 GGT7Q9UJ14 662 aa13.92□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ATP11BQ9Y2G3 1177 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 CYTH3O43739 400 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 CIAO1O76071 339 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 FYNP06241 537 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TRIM49P0CI25 452 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TRIM49CP0CI26 452 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 NBPF9Q3BBW0 867 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ADGRF4Q8IZF3 695 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 CYGBQ8WWM9 190 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ELMO2Q96JJ3 720 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 MARCOQ9UEW3 520 aaPredicted RBP13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 ATP1A3P13637 1013 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 TBXAS1P24557 533 aaPredicted RBP13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 HDAC4P56524 1084 aa13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 EIF3EP60228 445 aaKnown RBP13.91□□□□□ -0.18
NPHP3-ACAD11-201ENST00000471702 CDC16Q13042 620 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms