RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 GOLGA2P5Q9HBQ8 144 aa17.87■□□□□ 0.45
COL9A3-208ENST00000469802 CNTN3Q9P232 1028 aa17.87■□□□□ 0.45
COL9A3-208ENST00000469802 EPS15L1Q9UBC2 864 aa17.87■□□□□ 0.45
COL9A3-208ENST00000469802 MTRRQ9UBK8 725 aa17.87■□□□□ 0.45
COL9A3-208ENST00000469802 KCNG1Q9UIX4 513 aa17.87■□□□□ 0.45
COL9A3-208ENST00000469802 CACNA1HO95180 2353 aa17.86■□□□□ 0.45
COL9A3-208ENST00000469802 ADAM12O43184 909 aa17.86■□□□□ 0.45
COL9A3-208ENST00000469802 TOM1L1O75674 476 aa17.86■□□□□ 0.45
COL9A3-208ENST00000469802 B3GAT3O94766 335 aa17.86■□□□□ 0.45
COL9A3-208ENST00000469802 NCKAP1LP55160 1127 aa17.86■□□□□ 0.45
COL9A3-208ENST00000469802 DCLRE1AQ6PJP8 1040 aa17.86■□□□□ 0.45
COL9A3-208ENST00000469802 ZPBP2Q6X784 338 aa17.86■□□□□ 0.45
COL9A3-208ENST00000469802 CEP57Q86XR8 500 aa17.86■□□□□ 0.45
COL9A3-208ENST00000469802 PRRX2Q99811 253 aa17.86■□□□□ 0.45
COL9A3-208ENST00000469802 KCNK12Q9HB15 430 aa17.86■□□□□ 0.45
COL9A3-208ENST00000469802 BLOC1S4Q9NUP1 217 aa17.86■□□□□ 0.45
COL9A3-208ENST00000469802 SLC38A7Q9NVC3 462 aa17.86■□□□□ 0.45
COL9A3-208ENST00000469802 ODF2LQ9ULJ1 636 aa17.86■□□□□ 0.45
COL9A3-208ENST00000469802 TSC2P49815 1807 aa17.86■□□□□ 0.45
COL9A3-208ENST00000469802 AVPR2P30518 371 aa17.85■□□□□ 0.45
COL9A3-208ENST00000469802 HOXA9P31269 272 aa17.85■□□□□ 0.45
COL9A3-208ENST00000469802 SMTNP53814 917 aa17.85■□□□□ 0.45
COL9A3-208ENST00000469802 OSTNP61366 133 aa17.85■□□□□ 0.45
COL9A3-208ENST00000469802 GRIN1Q05586 938 aa17.85■□□□□ 0.45
COL9A3-208ENST00000469802 TCF15Q12870 199 aa17.85■□□□□ 0.45
COL9A3-208ENST00000469802 STRN3Q13033 797 aa17.85■□□□□ 0.45
COL9A3-208ENST00000469802 TDGQ13569 410 aa17.85■□□□□ 0.45
COL9A3-208ENST00000469802 RAB33AQ14088 237 aa17.85■□□□□ 0.45
COL9A3-208ENST00000469802 NOLC1Q14978 699 aaKnown RBP eCLIP17.85■□□□□ 0.45
COL9A3-208ENST00000469802 DDX27Q96GQ7 796 aaKnown RBP17.85■□□□□ 0.45
COL9A3-208ENST00000469802 ZBTB45Q96K62 511 aaPredicted RBP17.85■□□□□ 0.45
COL9A3-208ENST00000469802 MYADMQ96S97 322 aa17.85■□□□□ 0.45
COL9A3-208ENST00000469802 REEP2Q9BRK0 252 aa17.85■□□□□ 0.45
COL9A3-208ENST00000469802 IGSF9Q9P2J2 1179 aa17.85■□□□□ 0.45
COL9A3-208ENST00000469802 DUSP12Q9UNI6 340 aa17.85■□□□□ 0.45
COL9A3-208ENST00000469802 NPHP3-ACAD11A0A0J9YXS1 232 aa17.84■□□□□ 0.45
COL9A3-208ENST00000469802 POU2F2P09086 479 aa17.84■□□□□ 0.45
COL9A3-208ENST00000469802 HNRNPA1P09651 372 aaKnown RBP eCLIP17.84■□□□□ 0.45
COL9A3-208ENST00000469802 TKTP29401 623 aaKnown RBP17.84■□□□□ 0.45
COL9A3-208ENST00000469802 LONP1P36776 959 aaKnown RBP17.84■□□□□ 0.45
COL9A3-208ENST00000469802 ZNF131P52739 623 aa17.84■□□□□ 0.45
COL9A3-208ENST00000469802 CACNB1Q02641 598 aaPredicted RBP17.84■□□□□ 0.45
COL9A3-208ENST00000469802 MCL1Q07820 350 aa17.84■□□□□ 0.45
COL9A3-208ENST00000469802 SF3A1Q15459 793 aaKnown RBP17.84■□□□□ 0.45
COL9A3-208ENST00000469802 ACAP3Q96P50 834 aa17.84■□□□□ 0.45
COL9A3-208ENST00000469802 TCHPQ9BT92 498 aa17.84■□□□□ 0.45
COL9A3-208ENST00000469802 HAPLN2Q9GZV7 340 aa17.84■□□□□ 0.45
COL9A3-208ENST00000469802 LARSQ9P2J5 1176 aaKnown RBP17.84■□□□□ 0.45
COL9A3-208ENST00000469802 ANKFY1Q9P2R3 1169 aa17.84■□□□□ 0.45
COL9A3-208ENST00000469802 BACE2Q9Y5Z0 518 aa17.84■□□□□ 0.45
COL9A3-208ENST00000469802 H0YCG3 227 aa17.83■□□□□ 0.44
COL9A3-208ENST00000469802 I3L4J1 428 aa17.83■□□□□ 0.44
COL9A3-208ENST00000469802 PODXLO00592 558 aa17.83■□□□□ 0.44
COL9A3-208ENST00000469802 C8AP07357 584 aa17.83■□□□□ 0.44
COL9A3-208ENST00000469802 PLCG1P19174 1290 aa17.83■□□□□ 0.44
COL9A3-208ENST00000469802 GBP2P32456 591 aaPredicted RBP17.83■□□□□ 0.44
COL9A3-208ENST00000469802 UBA7P41226 1012 aa17.83■□□□□ 0.44
COL9A3-208ENST00000469802 BRCC3P46736 316 aa17.83■□□□□ 0.44
COL9A3-208ENST00000469802 NUBP1P53384 320 aa17.83■□□□□ 0.44
COL9A3-208ENST00000469802 PTPN5P54829 565 aa17.83■□□□□ 0.44
COL9A3-208ENST00000469802 SLC10A6Q3KNW5 377 aa17.83■□□□□ 0.44
COL9A3-208ENST00000469802 LIN9Q5TKA1 542 aa17.83■□□□□ 0.44
COL9A3-208ENST00000469802 RSPO2Q6UXX9 243 aaPredicted RBP17.83■□□□□ 0.44
COL9A3-208ENST00000469802 GPBP1Q86WP2 473 aa17.83■□□□□ 0.44
COL9A3-208ENST00000469802 CALML4Q96GE6 196 aa17.83■□□□□ 0.44
COL9A3-208ENST00000469802 PIDD1Q9HB75 910 aa17.83■□□□□ 0.44
COL9A3-208ENST00000469802 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL9A3-208ENST00000469802 VPS37CA5D8V6 355 aaPredicted RBP17.82■□□□□ 0.44
COL9A3-208ENST00000469802 TRAPPC3O43617 180 aa17.82■□□□□ 0.44
COL9A3-208ENST00000469802 PIGRP01833 764 aa17.82■□□□□ 0.44
COL9A3-208ENST00000469802 HARSP12081 509 aaKnown RBP17.82■□□□□ 0.44
COL9A3-208ENST00000469802 PDCP20941 246 aa17.82■□□□□ 0.44
COL9A3-208ENST00000469802 SCP2P22307 547 aa17.82■□□□□ 0.44
COL9A3-208ENST00000469802 OR1D2P34982 312 aa17.82■□□□□ 0.44
COL9A3-208ENST00000469802 KARSQ15046 597 aaKnown RBP17.82■□□□□ 0.44
COL9A3-208ENST00000469802 PTPAQ15257 358 aa17.82■□□□□ 0.44
COL9A3-208ENST00000469802 ANKS3Q6ZW76 656 aa17.82■□□□□ 0.44
COL9A3-208ENST00000469802 HAUS6Q7Z4H7 955 aa17.82■□□□□ 0.44
COL9A3-208ENST00000469802 RAD54LQ92698 747 aa17.82■□□□□ 0.44
COL9A3-208ENST00000469802 C18orf25Q96B23 403 aaPredicted RBP17.82■□□□□ 0.44
COL9A3-208ENST00000469802 CDY1Q9Y6F8 540 aa17.82■□□□□ 0.44
COL9A3-208ENST00000469802 CLDN3O15551 220 aa17.81■□□□□ 0.44
COL9A3-208ENST00000469802 FAM189A1O60320 539 aa17.81■□□□□ 0.44
COL9A3-208ENST00000469802 LAMP2P13473 410 aa17.81■□□□□ 0.44
COL9A3-208ENST00000469802 RPL9P32969 192 aaKnown RBP17.81■□□□□ 0.44
COL9A3-208ENST00000469802 SEZ6Q53EL9 994 aa17.81■□□□□ 0.44
COL9A3-208ENST00000469802 PPM1LQ5SGD2 360 aa17.81■□□□□ 0.44
COL9A3-208ENST00000469802 CWF19L1Q69YN2 538 aaKnown RBP17.81■□□□□ 0.44
COL9A3-208ENST00000469802 SLC8B1Q6J4K2 584 aa17.81■□□□□ 0.44
COL9A3-208ENST00000469802 RTL10Q7L3V2 364 aa17.81■□□□□ 0.44
COL9A3-208ENST00000469802 GET4Q7L5D6 327 aaPredicted RBP17.81■□□□□ 0.44
COL9A3-208ENST00000469802 TMEM105Q8N8V8 129 aa17.81■□□□□ 0.44
COL9A3-208ENST00000469802 SLC7A14Q8TBB6 771 aa17.81■□□□□ 0.44
COL9A3-208ENST00000469802 NXPE3Q969Y0 559 aa17.81■□□□□ 0.44
COL9A3-208ENST00000469802 FIZ1Q96SL8 496 aa17.81■□□□□ 0.44
COL9A3-208ENST00000469802 CCSER1Q9C0I3 900 aa17.81■□□□□ 0.44
COL9A3-208ENST00000469802 TTC26A0AVF1 554 aa17.8■□□□□ 0.44
COL9A3-208ENST00000469802 ANHXE9PGG2 379 aa17.8■□□□□ 0.44
COL9A3-208ENST00000469802 SYN3O14994 580 aa17.8■□□□□ 0.44
COL9A3-208ENST00000469802 TBC1D4O60343 1298 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms