RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 CDT1Q9H211 546 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 MTRRQ9UBK8 725 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.03□□□□□ -0.48
COL4A3-204ENST00000469504 SMIM28A0A1B0GU29 152 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 ANHXE9PGG2 379 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 SYN3O14994 580 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 N4BP1O75113 896 aaKnown RBP12.02□□□□□ -0.49
COL4A3-204ENST00000469504 TOM1L1O75674 476 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 SPATA31D3P0C874 917 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 PLS3P13797 630 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 KCNE1P15382 129 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 RPL17P18621 184 aaKnown RBP12.02□□□□□ -0.49
COL4A3-204ENST00000469504 FSHRP23945 695 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 KYAT1Q16773 422 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 CWF19L1Q69YN2 538 aaKnown RBP12.02□□□□□ -0.49
COL4A3-204ENST00000469504 MCTP1Q6DN14 999 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 ZPBP2Q6X784 338 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 SPATA31D4Q6ZUB0 917 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 MTSS1LQ765P7 747 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 GLYCTKQ8IVS8 523 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 SLC44A3Q8N4M1 653 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 SYT2Q8N9I0 419 aaPredicted RBP12.02□□□□□ -0.49
COL4A3-204ENST00000469504 FLCNQ8NFG4 579 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 CDK5RAP3Q96JB5 506 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 TMX3Q96JJ7 454 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 MYADMQ96S97 322 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 SMOC2Q9H3U7 446 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 SLC2A4RGQ9NR83 387 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 CNTN3Q9P232 1028 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 LARSQ9P2J5 1176 aaKnown RBP12.02□□□□□ -0.49
COL4A3-204ENST00000469504 KCNH3Q9ULD8 1083 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 MAFFQ9ULX9 164 aa12.02□□□□□ -0.49
COL4A3-204ENST00000469504 NBL1P41271 181 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 CLCNKBP51801 687 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 MAPK7Q13164 816 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 IL17AQ16552 155 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 GLRA4Q5JXX5 417 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 SLC8B1Q6J4K2 584 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 PHLDB3Q6NSJ2 640 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 GET4Q7L5D6 327 aaPredicted RBP12.01□□□□□ -0.49
COL4A3-204ENST00000469504 CCDC105Q8IYK2 499 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 SIX5Q8N196 739 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 FEZF2Q8TBJ5 459 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 RABGGTAQ92696 567 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 SNX27Q96L92 541 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 DCBLD2Q96PD2 775 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 TSPAN18Q96SJ8 248 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 TCHPQ9BT92 498 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 MMTAG2Q9BU76 263 aaKnown RBP12.01□□□□□ -0.49
COL4A3-204ENST00000469504 RUSC1Q9BVN2 902 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 OXCT2Q9BYC2 517 aaPredicted RBP12.01□□□□□ -0.49
COL4A3-204ENST00000469504 PLEKHA5Q9HAU0 1116 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 AVENQ9NQS1 362 aaPredicted RBP12.01□□□□□ -0.49
COL4A3-204ENST00000469504 CACNG4Q9UBN1 327 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 CDH7Q9ULB5 785 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 ODF2LQ9ULJ1 636 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 MYO10Q9HD67 2058 aa12.01□□□□□ -0.49
COL4A3-204ENST00000469504 PLXNA3P51805 1871 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 C2orf16Q68DN1 1984 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 PP2D1A8MPX8 630 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 H0Y858 1186 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 H7C4K7 107 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 PODXLO00592 558 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 ABLIM1O14639 778 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 NPR3P17342 541 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 RFX1P22670 979 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 GJB2P29033 226 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 OR1D2P34982 312 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 SLC12A3P55017 1021 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 HTR4Q13639 388 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 NOLC1Q14978 699 aaKnown RBP eCLIP12□□□□□ -0.49
COL4A3-204ENST00000469504 AXDND1Q5T1B0 1012 aaPredicted RBP12□□□□□ -0.49
COL4A3-204ENST00000469504 TAS1R3Q7RTX0 852 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 BRAPQ7Z569 592 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 GRASPQ7Z6J2 395 aaPredicted RBP12□□□□□ -0.49
COL4A3-204ENST00000469504 TMEM161BQ8NDZ6 487 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 ZNF461Q8TAF7 563 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 SLC7A14Q8TBB6 771 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 CALML4Q96GE6 196 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 SHDQ96IW2 340 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 TARS2Q9BW92 718 aaKnown RBP12□□□□□ -0.49
COL4A3-204ENST00000469504 SMC3Q9UQE7 1217 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 USP20Q9Y2K6 914 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 CDY1Q9Y6F8 540 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 MYO15AQ9UKN7 3530 aa12□□□□□ -0.49
COL4A3-204ENST00000469504 MTCL1Q9Y4B5 1905 aaKnown RBP11.99□□□□□ -0.49
COL4A3-204ENST00000469504 VWA3AA6NCI4 1184 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 SLC16A4O15374 487 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 CLDN3O15551 220 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 GFRA3O60609 400 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 PLA2G4BP0C869 781 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 MAPTP10636 758 aaKnown RBP11.99□□□□□ -0.49
COL4A3-204ENST00000469504 PAX3P23760 479 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 CDC25AP30304 524 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 ELF1P32519 619 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 PFKPQ01813 784 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 MCL1Q07820 350 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 TMEM119Q4V9L6 283 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 TPGS2Q68CL5 300 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 KCNK18Q7Z418 384 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms