RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 KCNE1P15382 129 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 SCP2P22307 547 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 FGFR3P22607 806 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 GBP2P32456 591 aaPredicted RBP7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 RPL9P32969 192 aaKnown RBP7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 PLA2G5P39877 138 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 TXLNAP40222 546 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 NCKAP1LP55160 1127 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 NOLC1Q14978 699 aaKnown RBP eCLIP7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 SEZ6Q53EL9 994 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 XKR4Q5GH76 650 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 SPECC1Q5M775 1068 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 FAM173BQ6P4H8 233 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 UBALD2Q8IYN6 164 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 KRI1Q8N9T8 703 aaKnown RBP7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 LARP4BQ92615 738 aaKnown RBP7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 RAD54LQ92698 747 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 EPSTI1Q96J88 318 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 SNX27Q96L92 541 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 ZMAT2Q96NC0 199 aaKnown RBP7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 RHOBTB2Q9BYZ6 727 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 PRKD2Q9BZL6 878 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 CCSER1Q9C0I3 900 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 GOLGA2P5Q9HBQ8 144 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 WDR6Q9NNW5 1121 aaKnown RBP7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 BLOC1S4Q9NUP1 217 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 ZDHHC7Q9NXF8 308 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 TBX20Q9UMR3 447 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 NUB1Q9Y5A7 615 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 SRPRBQ9Y5M8 271 aaKnown RBP7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 TECTAO75443 2155 aa7.85□□□□□ -1.15
SNRPD3-205ENST00000468770 I3L4J1 428 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 K7ENM7 598 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 PODXLO00592 558 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 ABLIM1O14639 778 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 HNRNPDLO14979 420 aaKnown RBP7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 STX6O43752 255 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 ZMYND10O75800 440 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 CLTAP09496 248 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 IGFBP6P24592 240 aaPredicted RBP7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 ABCD1P33897 745 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 OR1D2P34982 312 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 BRCC3P46736 316 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 LIG4P49917 911 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 ZNF131P52739 623 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 SOX4Q06945 474 aaPredicted RBP7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 MCL1Q07820 350 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 RESTQ13127 1097 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 PTPAQ15257 358 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 KYAT1Q16773 422 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 SLC10A6Q3KNW5 377 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 LIN9Q5TKA1 542 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 RRAGBQ5VZM2 374 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 CD300LGQ6UXG3 332 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 ANKS3Q6ZW76 656 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 USP49Q70CQ1 688 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 FBXL6Q8N531 539 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 LRRC15Q8TF66 581 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 C18orf25Q96B23 403 aaPredicted RBP7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 ZNF707Q96C28 371 aaPredicted RBP7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 ASIC4Q96FT7 647 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 CLIC6Q96NY7 704 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 KCNH6Q9H252 994 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 ZSCAN16Q9H4T2 348 aaPredicted RBP7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 PLEKHA5Q9HAU0 1116 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 KCNK12Q9HB15 430 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 CNTN3Q9P232 1028 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 FBXO2Q9UK22 296 aaPredicted RBP7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 MTMR6Q9Y217 621 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 BACE2Q9Y5Z0 518 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 CDY1Q9Y6F8 540 aa7.84□□□□□ -1.15
SNRPD3-205ENST00000468770 CLUHO75153 1309 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 MYH11P35749 1972 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 ADAM12O43184 909 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 XYLBO75191 536 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 C8AP07357 584 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 HSP90AA1P07900 732 aaKnown RBP7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 HNRNPA1P09651 372 aaKnown RBP eCLIP7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 CXCL8P10145 99 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 TKTP29401 623 aaKnown RBP7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 NMT1P30419 496 aaKnown RBP7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 PPP2R3AQ06190 1150 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 SPAG1Q07617 926 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 TDGQ13569 410 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 RAB33AQ14088 237 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 SLC39A14Q15043 492 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 UVSSAQ2YD98 709 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 PPM1LQ5SGD2 360 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 AXDND1Q5T1B0 1012 aaPredicted RBP7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 SV2BQ7L1I2 683 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 DYMQ7RTS9 669 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 C3orf58Q8NDZ4 430 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 KCNN1Q92952 543 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 KIF12Q96FN5 646 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 MSTO1Q9BUK6 570 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 PANK2Q9BZ23 570 aa7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 RPF1Q9H9Y2 349 aaKnown RBP7.83□□□□□ -1.16
SNRPD3-205ENST00000468770 IGSF9Q9P2J2 1179 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms