RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 PCDHGA9Q9Y5G4 932 aaKnown RBP6.03□□□□□ -1.44
RBM39-226ENST00000468086 PCDHGA8Q9Y5G5 932 aa6.03□□□□□ -1.44
RBM39-226ENST00000468086 PCDHGA7Q9Y5G6 932 aa6.03□□□□□ -1.44
RBM39-226ENST00000468086 PCDHGA6Q9Y5G7 932 aa6.03□□□□□ -1.44
RBM39-226ENST00000468086 PCDHGA3Q9Y5H0 932 aa6.03□□□□□ -1.44
RBM39-226ENST00000468086 MYBBP1AQ9BQG0 1328 aaKnown RBP6.02□□□□□ -1.45
RBM39-226ENST00000468086 WNT10BO00744 389 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 ZNF185O15231 689 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 FOXN1O15353 648 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 RHOBTB3O94955 611 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 AMY1AP04745 511 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 RPLP2P05387 115 aaKnown RBP6.02□□□□□ -1.45
RBM39-226ENST00000468086 DDCP20711 480 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 IBSPP21815 317 aaPredicted RBP6.02□□□□□ -1.45
RBM39-226ENST00000468086 ZFP36P26651 326 aaKnown RBP6.02□□□□□ -1.45
RBM39-226ENST00000468086 PCSK1P29120 753 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 CTXN1P60606 82 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 RAP2BP61225 183 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 ABCB5Q2M3G0 1257 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 DACT2Q5SW24 774 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 LAIR1Q6GTX8 287 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 PPP4R3AQ6IN85 833 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 Q6ZPA2 131 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 MED25Q71SY5 747 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 FBXO18Q8NFZ0 1043 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 NLGN4YQ8NFZ3 816 aaPredicted RBP6.02□□□□□ -1.45
RBM39-226ENST00000468086 DPF2Q92785 391 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 IKZF4Q9H2S9 585 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 LDAHQ9H6V9 325 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 TUBD1Q9UJT1 453 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 ACTL7AQ9Y615 435 aa6.02□□□□□ -1.45
RBM39-226ENST00000468086 A0A087X1B8 175 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 CENPVL1A0A0U1RR11 272 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 MARCH11A6NNE9 402 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 XPOTO43592 962 aaKnown RBP6.01□□□□□ -1.45
RBM39-226ENST00000468086 B3GALT2O43825 422 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 RAMP2O60895 175 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 NDUFA10O95299 355 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 CFIP05156 583 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 FPR1P21462 350 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 C5AR1P21730 350 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 GCSHP23434 173 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 BLOC1S1P78537 153 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 CDC42EP1Q00587 391 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 CREMQ03060 361 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 FAM50AQ14320 339 aaKnown RBP6.01□□□□□ -1.45
RBM39-226ENST00000468086 PCBP2Q15366 365 aaKnown RBP eCLIP6.01□□□□□ -1.45
RBM39-226ENST00000468086 PTPROQ16827 1216 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 EFCAB2Q5VUJ9 269 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 ZNF529Q6P280 563 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 PNMA8AQ86V59 439 aaPredicted RBP6.01□□□□□ -1.45
RBM39-226ENST00000468086 RHOT1Q8IXI2 618 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 RPUSD2Q8IZ73 545 aaKnown RBP6.01□□□□□ -1.45
RBM39-226ENST00000468086 OR56A1Q8NGH5 318 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 NEU1Q99519 415 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 MLST8Q9BVC4 326 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 TDP1Q9NUW8 608 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 KLHL11Q9NVR0 708 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 SLC23A1Q9UHI7 598 aa6.01□□□□□ -1.45
RBM39-226ENST00000468086 HTRA2O43464 458 aaPredicted RBP6□□□□□ -1.45
RBM39-226ENST00000468086 CKBP12277 381 aa6□□□□□ -1.45
RBM39-226ENST00000468086 KRT4P19013 534 aa6□□□□□ -1.45
RBM39-226ENST00000468086 DDX6P26196 483 aaKnown RBP eCLIP6□□□□□ -1.45
RBM39-226ENST00000468086 ADKP55263 362 aaKnown RBP6□□□□□ -1.45
RBM39-226ENST00000468086 GUCY1B3Q02153 619 aa6□□□□□ -1.45
RBM39-226ENST00000468086 TSHZ3Q63HK5 1081 aa6□□□□□ -1.45
RBM39-226ENST00000468086 MAPKAPK5Q8IW41 473 aa6□□□□□ -1.45
RBM39-226ENST00000468086 FAM43AQ8N2R8 423 aa6□□□□□ -1.45
RBM39-226ENST00000468086 CPEB3Q8NE35 698 aaKnown RBP6□□□□□ -1.45
RBM39-226ENST00000468086 COA7Q96BR5 231 aa6□□□□□ -1.45
RBM39-226ENST00000468086 PHACTR3Q96KR7 559 aa6□□□□□ -1.45
RBM39-226ENST00000468086 TEKT5Q96M29 485 aa6□□□□□ -1.45
RBM39-226ENST00000468086 RNPEPQ9H4A4 650 aa6□□□□□ -1.45
RBM39-226ENST00000468086 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6□□□□□ -1.45
RBM39-226ENST00000468086 NOP58Q9Y2X3 529 aaKnown RBP6□□□□□ -1.45
RBM39-226ENST00000468086 IPPQ9Y573 584 aa6□□□□□ -1.45
RBM39-226ENST00000468086 CCND1P24385 295 aa5.99□□□□□ -1.45
RBM39-226ENST00000468086 EVA1CP58658 441 aa5.99□□□□□ -1.45
RBM39-226ENST00000468086 RAB39AQ14964 217 aa5.99□□□□□ -1.45
RBM39-226ENST00000468086 SPDYE7PQ495Y7 208 aa5.99□□□□□ -1.45
RBM39-226ENST00000468086 ABHD17BQ5VST6 288 aa5.99□□□□□ -1.45
RBM39-226ENST00000468086 RSPH3Q86UC2 560 aa5.99□□□□□ -1.45
RBM39-226ENST00000468086 ZGPATQ8N5A5 531 aaKnown RBP5.99□□□□□ -1.45
RBM39-226ENST00000468086 FITM2Q8N6M3 262 aa5.99□□□□□ -1.45
RBM39-226ENST00000468086 NUP133Q8WUM0 1156 aa5.99□□□□□ -1.45
RBM39-226ENST00000468086 TEX101Q9BY14 249 aa5.99□□□□□ -1.45
RBM39-226ENST00000468086 ASPSCR1Q9BZE9 553 aa5.99□□□□□ -1.45
RBM39-226ENST00000468086 C11orf54Q9H0W9 315 aaPredicted RBP5.99□□□□□ -1.45
RBM39-226ENST00000468086 SERHL2Q9H4I8 314 aa5.99□□□□□ -1.45
RBM39-226ENST00000468086 HOMER2Q9NSB8 354 aa5.99□□□□□ -1.45
RBM39-226ENST00000468086 FBXO34Q9NWN3 711 aa5.99□□□□□ -1.45
RBM39-226ENST00000468086 CALCOCO1Q9P1Z2 691 aa5.99□□□□□ -1.45
RBM39-226ENST00000468086 PACSIN3Q9UKS6 424 aa5.99□□□□□ -1.45
RBM39-226ENST00000468086 TNKSO95271 1327 aa5.99□□□□□ -1.45
RBM39-226ENST00000468086 COL4A3Q01955 1670 aa5.98□□□□□ -1.45
RBM39-226ENST00000468086 A0A1B0GTW7 788 aa5.98□□□□□ -1.45
RBM39-226ENST00000468086 GCP02774 474 aa5.98□□□□□ -1.45
RBM39-226ENST00000468086 MTHFD1P11586 935 aaKnown RBP5.98□□□□□ -1.45
RBM39-226ENST00000468086 RECQLP46063 649 aaPredicted RBP5.98□□□□□ -1.45
RBM39-226ENST00000468086 USP14P54578 494 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms