RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 STAMQ92783 540 aa20.87■□□□□ 0.93
COL7A1-207ENST00000467985 BICD1Q96G01 975 aa20.87■□□□□ 0.93
COL7A1-207ENST00000467985 KCNH6Q9H252 994 aa20.87■□□□□ 0.93
COL7A1-207ENST00000467985 ZSCAN16Q9H4T2 348 aaPredicted RBP20.87■□□□□ 0.93
COL7A1-207ENST00000467985 CNTN3Q9P232 1028 aa20.87■□□□□ 0.93
COL7A1-207ENST00000467985 ANKFY1Q9P2R3 1169 aa20.87■□□□□ 0.93
COL7A1-207ENST00000467985 CLIC4Q9Y696 253 aa20.87■□□□□ 0.93
COL7A1-207ENST00000467985 TBCAO75347 108 aaKnown RBP20.86■□□□□ 0.93
COL7A1-207ENST00000467985 SPATA31D3P0C874 917 aa20.86■□□□□ 0.93
COL7A1-207ENST00000467985 HARSP12081 509 aaKnown RBP20.86■□□□□ 0.93
COL7A1-207ENST00000467985 RPL17P18621 184 aaKnown RBP20.86■□□□□ 0.93
COL7A1-207ENST00000467985 FGFR3P22607 806 aa20.86■□□□□ 0.93
COL7A1-207ENST00000467985 DDIT3P35638 169 aa20.86■□□□□ 0.93
COL7A1-207ENST00000467985 TXLNAP40222 546 aa20.86■□□□□ 0.93
COL7A1-207ENST00000467985 CACNB1Q02641 598 aaPredicted RBP20.86■□□□□ 0.93
COL7A1-207ENST00000467985 MCL1Q07820 350 aa20.86■□□□□ 0.93
COL7A1-207ENST00000467985 MCM6Q14566 821 aa20.86■□□□□ 0.93
COL7A1-207ENST00000467985 KYAT1Q16773 422 aa20.86■□□□□ 0.93
COL7A1-207ENST00000467985 SPATA31D4Q6ZUB0 917 aa20.86■□□□□ 0.93
COL7A1-207ENST00000467985 GLYCTKQ8IVS8 523 aa20.86■□□□□ 0.93
COL7A1-207ENST00000467985 PBXIP1Q96AQ6 731 aa20.86■□□□□ 0.93
COL7A1-207ENST00000467985 ZBTB45Q96K62 511 aaPredicted RBP20.86■□□□□ 0.93
COL7A1-207ENST00000467985 CCDC39Q9UFE4 941 aa20.86■□□□□ 0.93
COL7A1-207ENST00000467985 SRPRBQ9Y5M8 271 aaKnown RBP20.86■□□□□ 0.93
COL7A1-207ENST00000467985 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.86■□□□□ 0.93
COL7A1-207ENST00000467985 MORC2Q9Y6X9 1032 aaPredicted RBP20.86■□□□□ 0.93
COL7A1-207ENST00000467985 CITO14578 2027 aa20.86■□□□□ 0.93
COL7A1-207ENST00000467985 C2orf16Q68DN1 1984 aa20.86■□□□□ 0.93
COL7A1-207ENST00000467985 RPL9P32969 192 aaKnown RBP20.85■□□□□ 0.93
COL7A1-207ENST00000467985 MATR3P43243 847 aaKnown RBP eCLIP20.85■□□□□ 0.93
COL7A1-207ENST00000467985 SMG7Q92540 1137 aaKnown RBP20.85■□□□□ 0.93
COL7A1-207ENST00000467985 CLSTN3Q9BQT9 956 aa20.85■□□□□ 0.93
COL7A1-207ENST00000467985 PLEKHA5Q9HAU0 1116 aa20.85■□□□□ 0.93
COL7A1-207ENST00000467985 WDR6Q9NNW5 1121 aaKnown RBP20.85■□□□□ 0.93
COL7A1-207ENST00000467985 STK17AQ9UEE5 414 aa20.85■□□□□ 0.93
COL7A1-207ENST00000467985 LIMD1Q9UGP4 676 aa20.85■□□□□ 0.93
COL7A1-207ENST00000467985 FBXO2Q9UK22 296 aaPredicted RBP20.85■□□□□ 0.93
COL7A1-207ENST00000467985 TBX20Q9UMR3 447 aa20.85■□□□□ 0.93
COL7A1-207ENST00000467985 ZDBF2Q9HCK1 2354 aa20.85■□□□□ 0.93
COL7A1-207ENST00000467985 ZNF318Q5VUA4 2279 aa20.84■□□□□ 0.93
COL7A1-207ENST00000467985 K7ENM7 598 aa20.84■□□□□ 0.93
COL7A1-207ENST00000467985 RFPL2O75678 378 aa20.84■□□□□ 0.93
COL7A1-207ENST00000467985 CLTAP09496 248 aa20.84■□□□□ 0.93
COL7A1-207ENST00000467985 MARCKSP29966 332 aaPredicted RBP20.84■□□□□ 0.93
COL7A1-207ENST00000467985 LIG4P49917 911 aa20.84■□□□□ 0.93
COL7A1-207ENST00000467985 LIN9Q5TKA1 542 aa20.84■□□□□ 0.93
COL7A1-207ENST00000467985 SUGP1Q8IWZ8 645 aaKnown RBP20.84■□□□□ 0.93
COL7A1-207ENST00000467985 LRRC15Q8TF66 581 aa20.84■□□□□ 0.93
COL7A1-207ENST00000467985 ZNF707Q96C28 371 aaPredicted RBP20.84■□□□□ 0.93
COL7A1-207ENST00000467985 EPSTI1Q96J88 318 aa20.84■□□□□ 0.93
COL7A1-207ENST00000467985 PRKD2Q9BZL6 878 aa20.84■□□□□ 0.93
COL7A1-207ENST00000467985 PIDD1Q9HB75 910 aa20.84■□□□□ 0.93
COL7A1-207ENST00000467985 GOLGA2P5Q9HBQ8 144 aa20.84■□□□□ 0.93
COL7A1-207ENST00000467985 FBXW11Q9UKB1 542 aa20.84■□□□□ 0.93
COL7A1-207ENST00000467985 MTMR6Q9Y217 621 aa20.84■□□□□ 0.93
COL7A1-207ENST00000467985 CLUHO75153 1309 aa20.83■□□□□ 0.93
COL7A1-207ENST00000467985 PODXLO00592 558 aa20.83■□□□□ 0.93
COL7A1-207ENST00000467985 HNRNPDLO14979 420 aaKnown RBP20.83■□□□□ 0.93
COL7A1-207ENST00000467985 STX6O43752 255 aa20.83■□□□□ 0.93
COL7A1-207ENST00000467985 TRAK2O60296 914 aa20.83■□□□□ 0.93
COL7A1-207ENST00000467985 ZMYND10O75800 440 aa20.83■□□□□ 0.93
COL7A1-207ENST00000467985 PIGRP01833 764 aa20.83■□□□□ 0.93
COL7A1-207ENST00000467985 HNRNPA1P09651 372 aaKnown RBP eCLIP20.83■□□□□ 0.93
COL7A1-207ENST00000467985 SOX4Q06945 474 aaPredicted RBP20.83■□□□□ 0.93
COL7A1-207ENST00000467985 ANKS3Q6ZW76 656 aa20.83■□□□□ 0.93
COL7A1-207ENST00000467985 FBXL6Q8N531 539 aa20.83■□□□□ 0.93
COL7A1-207ENST00000467985 KRI1Q8N9T8 703 aaKnown RBP20.83■□□□□ 0.93
COL7A1-207ENST00000467985 FEZF2Q8TBJ5 459 aa20.83■□□□□ 0.93
COL7A1-207ENST00000467985 SNX21Q969T3 373 aa20.83■□□□□ 0.93
COL7A1-207ENST00000467985 ASIC4Q96FT7 647 aa20.83■□□□□ 0.93
COL7A1-207ENST00000467985 ZMAT2Q96NC0 199 aaKnown RBP20.83■□□□□ 0.93
COL7A1-207ENST00000467985 MTRRQ9UBK8 725 aa20.83■□□□□ 0.93
COL7A1-207ENST00000467985 BACE2Q9Y5Z0 518 aa20.83■□□□□ 0.93
COL7A1-207ENST00000467985 MYO10Q9HD67 2058 aa20.82■□□□□ 0.92
COL7A1-207ENST00000467985 VWA8A3KMH1 1905 aa20.82■□□□□ 0.92
COL7A1-207ENST00000467985 MYBP10242 640 aa20.82■□□□□ 0.92
COL7A1-207ENST00000467985 RAB33AQ14088 237 aa20.82■□□□□ 0.92
COL7A1-207ENST00000467985 SLC39A14Q15043 492 aa20.82■□□□□ 0.92
COL7A1-207ENST00000467985 SLC10A6Q3KNW5 377 aa20.82■□□□□ 0.92
COL7A1-207ENST00000467985 CD300LGQ6UXG3 332 aa20.82■□□□□ 0.92
COL7A1-207ENST00000467985 RTL10Q7L3V2 364 aa20.82■□□□□ 0.92
COL7A1-207ENST00000467985 C3orf58Q8NDZ4 430 aa20.82■□□□□ 0.92
COL7A1-207ENST00000467985 ZHX3Q9H4I2 956 aa20.82■□□□□ 0.92
COL7A1-207ENST00000467985 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.82■□□□□ 0.92
COL7A1-207ENST00000467985 PIEZO1Q92508 2521 aa20.82■□□□□ 0.92
COL7A1-207ENST00000467985 ASGR2P07307 311 aa20.81■□□□□ 0.92
COL7A1-207ENST00000467985 PDIA4P13667 645 aaKnown RBP20.81■□□□□ 0.92
COL7A1-207ENST00000467985 TKTP29401 623 aaKnown RBP20.81■□□□□ 0.92
COL7A1-207ENST00000467985 HOXA9P31269 272 aa20.81■□□□□ 0.92
COL7A1-207ENST00000467985 OR1D2P34982 312 aa20.81■□□□□ 0.92
COL7A1-207ENST00000467985 CEBPZQ03701 1054 aaKnown RBP20.81■□□□□ 0.92
COL7A1-207ENST00000467985 UVSSAQ2YD98 709 aa20.81■□□□□ 0.92
COL7A1-207ENST00000467985 SPECC1Q5M775 1068 aa20.81■□□□□ 0.92
COL7A1-207ENST00000467985 RRAGBQ5VZM2 374 aa20.81■□□□□ 0.92
COL7A1-207ENST00000467985 FAM173BQ6P4H8 233 aa20.81■□□□□ 0.92
COL7A1-207ENST00000467985 USP49Q70CQ1 688 aa20.81■□□□□ 0.92
COL7A1-207ENST00000467985 C18orf25Q96B23 403 aaPredicted RBP20.81■□□□□ 0.92
COL7A1-207ENST00000467985 TSPAN18Q96SJ8 248 aa20.81■□□□□ 0.92
COL7A1-207ENST00000467985 FOXD4L1Q9NU39 408 aa20.81■□□□□ 0.92
COL7A1-207ENST00000467985 IGSF9Q9P2J2 1179 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms