RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 PHLPP2Q6ZVD8 1323 aa15.41■□□□□ 0.06
CCHCR1-211ENST00000467553 C2orf16Q68DN1 1984 aa15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 CACNA1HO95180 2353 aa15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 CCDC195A0A1B0GUA6 201 aa15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 C2CD2LO14523 706 aa15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 GALR2O43603 387 aaPredicted RBP15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 CUTAO60888 179 aa15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 TADA2AO75478 443 aa15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 WEE2P0C1S8 567 aa15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 STAT6P42226 847 aa15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 VCPP55072 806 aaKnown RBP15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 ELAVL2Q12926 359 aaKnown RBP15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 TUSC3Q13454 348 aa15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 DCAF4L1Q3SXM0 396 aa15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 ATL3Q6DD88 541 aa15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 TAS1R1Q7RTX1 841 aa15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 TMEM161BQ8NDZ6 487 aa15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 PARVGQ9HBI0 331 aa15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 TNFSF13BQ9Y275 285 aa15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 SF3B1O75533 1304 aaKnown RBP eCLIP15.4■□□□□ 0.06
CCHCR1-211ENST00000467553 A0A087X0B3 334 aa15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 TRAK2O60296 914 aa15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 TBCAO75347 108 aaKnown RBP15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 THP07101 528 aa15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 MAPTP10636 758 aaKnown RBP15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 ME1P48163 572 aa15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 HSP90AA2PQ14568 343 aaPredicted RBP15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 ASTLQ6HA08 431 aaPredicted RBP15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 KANK3Q6NY19 840 aa15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 RTL10Q7L3V2 364 aa15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 HAUS6Q7Z4H7 955 aa15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 KCNG4Q8TDN1 519 aa15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 ZBTB45Q96K62 511 aaPredicted RBP15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 MFSD1Q9H3U5 465 aa15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 EPS15L1Q9UBC2 864 aa15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 DUSP12Q9UNI6 340 aa15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 ZDHHC9Q9Y397 364 aa15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 ZFP37Q9Y6Q3 630 aaPredicted RBP15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 PLXNA3P51805 1871 aa15.39■□□□□ 0.05
CCHCR1-211ENST00000467553 MYMKA6NI61 221 aa15.38■□□□□ 0.05
CCHCR1-211ENST00000467553 H0YCG3 227 aa15.38■□□□□ 0.05
CCHCR1-211ENST00000467553 RECQL4O94761 1208 aa15.38■□□□□ 0.05
CCHCR1-211ENST00000467553 ASGR2P07307 311 aa15.38■□□□□ 0.05
CCHCR1-211ENST00000467553 HARSP12081 509 aaKnown RBP15.38■□□□□ 0.05
CCHCR1-211ENST00000467553 MATR3P43243 847 aaKnown RBP eCLIP15.38■□□□□ 0.05
CCHCR1-211ENST00000467553 NCKAP1LP55160 1127 aa15.38■□□□□ 0.05
CCHCR1-211ENST00000467553 OSTNP61366 133 aa15.38■□□□□ 0.05
CCHCR1-211ENST00000467553 ZNF568Q3ZCX4 644 aa15.38■□□□□ 0.05
CCHCR1-211ENST00000467553 LILRA6Q6PI73 481 aa15.38■□□□□ 0.05
CCHCR1-211ENST00000467553 DDX12PQ92771 950 aa15.38■□□□□ 0.05
CCHCR1-211ENST00000467553 BICD1Q96G01 975 aa15.38■□□□□ 0.05
CCHCR1-211ENST00000467553 GPR62Q9BZJ7 368 aa15.38■□□□□ 0.05
CCHCR1-211ENST00000467553 KCNK12Q9HB15 430 aa15.38■□□□□ 0.05
CCHCR1-211ENST00000467553 RCOR1Q9UKL0 485 aa15.38■□□□□ 0.05
CCHCR1-211ENST00000467553 PCDHA7Q9UN72 937 aa15.38■□□□□ 0.05
CCHCR1-211ENST00000467553 CLUHO75153 1309 aa15.38■□□□□ 0.05
CCHCR1-211ENST00000467553 MYO15AQ9UKN7 3530 aa15.38■□□□□ 0.05
CCHCR1-211ENST00000467553 DMDP11532 3685 aa15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 PROB1E7EW31 1015 aa15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 K7ENM7 598 aa15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 TGM5O43548 720 aa15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 NMT1P30419 496 aaKnown RBP15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 ZNF131P52739 623 aa15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 AXDND1Q5T1B0 1012 aaPredicted RBP15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 SHC4Q6S5L8 630 aa15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 RIN2Q8WYP3 895 aaPredicted RBP15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 SMG7Q92540 1137 aaKnown RBP15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 ATOH1Q92858 354 aaPredicted RBP15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 DHX58Q96C10 678 aa15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 CHAMP1Q96JM3 812 aa15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 RTP3Q9BQQ7 232 aa15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 TTPALQ9BTX7 342 aa15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 PRKD2Q9BZL6 878 aa15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 CDT1Q9H211 546 aa15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 CXCL16Q9H2A7 254 aa15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 PTPRHQ9HD43 1115 aa15.37■□□□□ 0.05
CCHCR1-211ENST00000467553 TRIP11Q15643 1979 aa15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 TMEM189-UBE2V1I3L0A0 370 aa15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 PDGFBP01127 241 aaPredicted RBP15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 HNRNPA1P09651 372 aaKnown RBP eCLIP15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 IDEP14735 1019 aa15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 HOXA9P31269 272 aa15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 YARSP54577 528 aaKnown RBP15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 MPZL3Q6UWV2 235 aa15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 CEP120Q8N960 986 aa15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 PIK3R5Q8WYR1 880 aa15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 RABGGTAQ92696 567 aa15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 UROC1Q96N76 676 aa15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 CCDC94Q9BW85 323 aaPredicted RBP15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 PIDD1Q9HB75 910 aa15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 FAM13BQ9NYF5 915 aa15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 TBC1D7Q9P0N9 293 aa15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 ANKFY1Q9P2R3 1169 aa15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 WNT16Q9UBV4 365 aa15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 TBX20Q9UMR3 447 aa15.36■□□□□ 0.05
CCHCR1-211ENST00000467553 POLR2DO15514 142 aaKnown RBP15.35■□□□□ 0.05
CCHCR1-211ENST00000467553 CLDN3O15551 220 aa15.35■□□□□ 0.05
CCHCR1-211ENST00000467553 TOM1L1O75674 476 aa15.35■□□□□ 0.05
CCHCR1-211ENST00000467553 ZMYND10O75800 440 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms