RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 DMRTB1Q96MA1 342 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 ZSWIM3Q96MP5 696 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 FAM193BQ96PV7 902 aaPredicted RBP4.8□□□□□ -1.64
CPS1-205ENST00000467353 UBL7Q96S82 380 aaPredicted RBP4.8□□□□□ -1.64
CPS1-205ENST00000467353 SPSB2Q99619 263 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 CLSTN3Q9BQT9 956 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 TRMT61BQ9BVS5 477 aaKnown RBP4.8□□□□□ -1.64
CPS1-205ENST00000467353 CCDC86Q9H6F5 360 aaKnown RBP4.8□□□□□ -1.64
CPS1-205ENST00000467353 CCSER2Q9H7U1 834 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 AGO4Q9HCK5 861 aaKnown RBP4.8□□□□□ -1.64
CPS1-205ENST00000467353 TMEM9BQ9NQ34 198 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 TRPV5Q9NQA5 729 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 FAM105AQ9NUU6 356 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 POLR3BQ9NW08 1133 aaPredicted RBP4.8□□□□□ -1.64
CPS1-205ENST00000467353 GDE1Q9NZC3 331 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 FNIP2Q9P278 1114 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 FBXW11Q9UKB1 542 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 KCNH3Q9ULD8 1083 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 AKT3Q9Y243 479 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 MRPS23Q9Y3D9 190 aaKnown RBP4.8□□□□□ -1.64
CPS1-205ENST00000467353 PCDHB2Q9Y5E7 798 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 PCDHB11Q9Y5F2 797 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 DNMT3AQ9Y6K1 912 aaPredicted RBP4.8□□□□□ -1.64
CPS1-205ENST00000467353 PIEZO2Q9H5I5 2752 aa4.8□□□□□ -1.64
CPS1-205ENST00000467353 MYO18BQ8IUG5 2567 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 TEX15Q9BXT5 2789 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 NFASCO94856 1347 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 PYCARD-AS1I3L0S3 204 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 ARNTLO00327 626 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 KHNYNO15037 678 aaKnown RBP4.79□□□□□ -1.64
CPS1-205ENST00000467353 ATXN7O15265 892 aaPredicted RBP4.79□□□□□ -1.64
CPS1-205ENST00000467353 MAGEB2O15479 319 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 ADAM12O43184 909 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 XYLBO75191 536 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 AKAP3O75969 853 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 C8AP07357 584 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 CEBPBP17676 345 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 WEE1P30291 646 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 GDI1P31150 447 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 SCNN1AP37088 669 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 VIPR2P41587 438 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 OR1G1P47890 313 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 SOX9P48436 509 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 DRP2Q13474 957 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 PABPC1LQ4VXU2 614 aaKnown RBP4.79□□□□□ -1.64
CPS1-205ENST00000467353 CCDC178Q5BJE1 867 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 DGKKQ5KSL6 1271 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 FAM160B1Q5W0V3 765 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 TWF2Q6IBS0 349 aaKnown RBP4.79□□□□□ -1.64
CPS1-205ENST00000467353 TXNDC11Q6PKC3 985 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 VITQ6UXI7 678 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 CCNI2Q6ZMN8 369 aaPredicted RBP4.79□□□□□ -1.64
CPS1-205ENST00000467353 PIP4P1Q86T03 277 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 ZNF589Q86UQ0 364 aaPredicted RBP4.79□□□□□ -1.64
CPS1-205ENST00000467353 CKAP2LQ8IYA6 745 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 URGCPQ8TCY9 931 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 OTUD7AQ8TE49 926 aaPredicted RBP4.79□□□□□ -1.64
CPS1-205ENST00000467353 RABGGTAQ92696 567 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 IRF7Q92985 503 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 CUL5Q93034 780 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 GPATCH3Q96I76 525 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 MXRA8Q9BRK3 442 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 SDF4Q9BRK5 362 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 RBCK1Q9BYM8 510 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 RNF41Q9H4P4 317 aaPredicted RBP4.79□□□□□ -1.64
CPS1-205ENST00000467353 ZFP14Q9HCL3 533 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 ZNF302Q9NR11 478 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 HELLSQ9NRZ9 838 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 MIOSQ9NXC5 875 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 KANSL3Q9P2N6 904 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 VTI1BQ9UEU0 232 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 KIAA1024Q9UPX6 916 aa4.79□□□□□ -1.64
CPS1-205ENST00000467353 C2orf16Q68DN1 1984 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 LOXHD1Q8IVV2 1947 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 A0A087WZ62 844 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 CCDC163A0A0D9SF12 145 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 A0A0D9SFI3 127 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 SLC38A8A6NNN8 435 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 H0Y626 953 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 DDX39AO00148 427 aaKnown RBP4.78□□□□□ -1.64
CPS1-205ENST00000467353 ZNF213O14771 459 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 DHX15O43143 795 aaKnown RBP4.78□□□□□ -1.64
CPS1-205ENST00000467353 PRPF40AO75400 957 aaKnown RBP4.78□□□□□ -1.64
CPS1-205ENST00000467353 TRIM16O95361 564 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 P4HBP07237 508 aaKnown RBP4.78□□□□□ -1.64
CPS1-205ENST00000467353 RHOP08100 348 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 TMOD1P28289 359 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 HOXA9P31269 272 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 MMP16P51512 607 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 MLLT6P55198 1093 aaPredicted RBP4.78□□□□□ -1.64
CPS1-205ENST00000467353 DSC1Q08554 894 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 PSMD2Q13200 908 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 SEMA3BQ13214 749 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 CCINQ13939 588 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 LRRC32Q14392 662 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 GRM4Q14833 912 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 SEC23AQ15436 765 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 UBE2SQ16763 222 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 USP41Q3LFD5 358 aa4.78□□□□□ -1.64
CPS1-205ENST00000467353 MCMDC2Q4G0Z9 681 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms