RNA–Protein interactions for RNA: ENST00000466901.5

COPS7B-218, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-218ENST00000466901 RPF1Q9H9Y2 349 aaKnown RBP8.53□□□□□ -1.04
COPS7B-218ENST00000466901 PLEKHA5Q9HAU0 1116 aa8.53□□□□□ -1.04
COPS7B-218ENST00000466901 GDPD2Q9HCC8 539 aa8.53□□□□□ -1.04
COPS7B-218ENST00000466901 CACNG4Q9UBN1 327 aa8.53□□□□□ -1.04
COPS7B-218ENST00000466901 SERTAD1Q9UHV2 236 aa8.53□□□□□ -1.04
COPS7B-218ENST00000466901 AGO2Q9UKV8 859 aaKnown RBP8.53□□□□□ -1.04
COPS7B-218ENST00000466901 FAM50BQ9Y247 325 aa8.53□□□□□ -1.04
COPS7B-218ENST00000466901 STYXL1Q9Y6J8 313 aa8.53□□□□□ -1.04
COPS7B-218ENST00000466901 SF3B1O75533 1304 aaKnown RBP eCLIP8.53□□□□□ -1.04
COPS7B-218ENST00000466901 PDCD11Q14690 1871 aaKnown RBP8.52□□□□□ -1.05
COPS7B-218ENST00000466901 PVALEFA0A1B0GWK0 134 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 TTC26A0AVF1 554 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 LACTBL1A8MY62 500 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 DLL1O00548 723 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 TRAPPC3O43617 180 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 ACTN4O43707 911 aaKnown RBP8.52□□□□□ -1.05
COPS7B-218ENST00000466901 FAM189A1O60320 539 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 CLASP2O75122 1294 aaKnown RBP8.52□□□□□ -1.05
COPS7B-218ENST00000466901 TBX10O75333 385 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 B3GAT3O94766 335 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 PRPF6O94906 941 aaKnown RBP8.52□□□□□ -1.05
COPS7B-218ENST00000466901 KIF4AO95239 1232 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 GLP2RO95838 553 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 EFEMP2O95967 443 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 MYL1P05976 194 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 KLRC2P26717 231 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 CASP1P29466 404 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 RPL9P32969 192 aaKnown RBP8.52□□□□□ -1.05
COPS7B-218ENST00000466901 TNFSF9P41273 254 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 GLUD2P49448 558 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 ACOT2P49753 483 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 CLCNKBP51801 687 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 NDUFA8P51970 172 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 DSG1Q02413 1049 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 ELAVL2Q12926 359 aaKnown RBP8.52□□□□□ -1.05
COPS7B-218ENST00000466901 CUL4BQ13620 913 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 CLUL1Q15846 466 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 UPP1Q16831 310 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 FAM26FQ5R3K3 315 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 KIAA0319Q5VV43 1072 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 TMEM184AQ6ZMB5 413 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 PPFIBP1Q86W92 1011 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 CD302Q8IX05 232 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 GRAMD1CQ8IYS0 662 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 RNF168Q8IYW5 571 aaPredicted RBP8.52□□□□□ -1.05
COPS7B-218ENST00000466901 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.52□□□□□ -1.05
COPS7B-218ENST00000466901 ADAMTS19Q8TE59 1207 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 CASP10Q92851 521 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 HPS3Q969F9 1004 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 C18orf25Q96B23 403 aaPredicted RBP8.52□□□□□ -1.05
COPS7B-218ENST00000466901 FAM212AQ96EL1 285 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 KIF12Q96FN5 646 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 PAGE5Q96GU1 130 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 TSPAN18Q96SJ8 248 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 TTPALQ9BTX7 342 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 COL25A1Q9BXS0 654 aaPredicted RBP8.52□□□□□ -1.05
COPS7B-218ENST00000466901 FGFBP2Q9BYJ0 223 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 GPR62Q9BZJ7 368 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 GOLGA2P5Q9HBQ8 144 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 CHST7Q9NS84 486 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 CLEC1BQ9P126 229 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 CD207Q9UJ71 328 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 CPSF3Q9UKF6 684 aaKnown RBP8.52□□□□□ -1.05
COPS7B-218ENST00000466901 CIZ1Q9ULV3 898 aaPredicted RBP8.52□□□□□ -1.05
COPS7B-218ENST00000466901 BARX2Q9UMQ3 279 aaPredicted RBP8.52□□□□□ -1.05
COPS7B-218ENST00000466901 HPSEQ9Y251 543 aa8.52□□□□□ -1.05
COPS7B-218ENST00000466901 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.52□□□□□ -1.05
COPS7B-218ENST00000466901 FAM237AA0A1B0GTK4 181 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 GRXCR2A6NFK2 248 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 TISP43B9A030 160 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 TMEM189-UBE2V1I3L0A0 370 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 PODXLO00592 558 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 EIF3DO15371 548 aaKnown RBP eCLIP8.51□□□□□ -1.05
COPS7B-218ENST00000466901 MEFVO15553 781 aaPredicted RBP8.51□□□□□ -1.05
COPS7B-218ENST00000466901 XPOTO43592 962 aaKnown RBP8.51□□□□□ -1.05
COPS7B-218ENST00000466901 LILRB3O75022 631 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 ZNF202O95125 648 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 LDHAP00338 332 aaKnown RBP8.51□□□□□ -1.05
COPS7B-218ENST00000466901 CNPP09543 421 aaKnown RBP8.51□□□□□ -1.05
COPS7B-218ENST00000466901 HOXB8P17481 243 aaPredicted RBP8.51□□□□□ -1.05
COPS7B-218ENST00000466901 GARTP22102 1010 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 ADSSP30520 456 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 RBM10P98175 930 aaKnown RBP8.51□□□□□ -1.05
COPS7B-218ENST00000466901 POU5F1Q01860 360 aaKnown RBP8.51□□□□□ -1.05
COPS7B-218ENST00000466901 CREMQ03060 361 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 SOX4Q06945 474 aaPredicted RBP8.51□□□□□ -1.05
COPS7B-218ENST00000466901 SPAG1Q07617 926 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 SMAD4Q13485 552 aaKnown RBP8.51□□□□□ -1.05
COPS7B-218ENST00000466901 KCNC3Q14003 757 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 ENOX2Q16206 610 aaKnown RBP8.51□□□□□ -1.05
COPS7B-218ENST00000466901 ZBTB41Q5SVQ8 909 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 FAM171A1Q5VUB5 890 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 CEP57Q86XR8 500 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 GPR65Q8IYL9 337 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 VN1R2Q8NFZ6 395 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 RIN2Q8WYP3 895 aaPredicted RBP8.51□□□□□ -1.05
COPS7B-218ENST00000466901 CCDC34Q96HJ3 373 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 MSLNLQ96KJ4 702 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 B3GALT6Q96L58 329 aa8.51□□□□□ -1.05
COPS7B-218ENST00000466901 KLHL5Q96PQ7 755 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms