RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 HELQQ8TDG4 1101 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 ZNF516Q92618 1163 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 CCDC127Q96BQ5 260 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 CASD1Q96PB1 797 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 PPP1R10Q96QC0 940 aaKnown RBP12.08□□□□□ -0.48
VCP-204ENST00000466100 POP1Q99575 1024 aaKnown RBP12.08□□□□□ -0.48
VCP-204ENST00000466100 TUBGCP2Q9BSJ2 902 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 INTS13Q9NVM9 706 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 MIOSQ9NXC5 875 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 TAB2Q9NYJ8 693 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 MAGEC2Q9UBF1 373 aaPredicted RBP12.08□□□□□ -0.48
VCP-204ENST00000466100 DERAQ9Y315 318 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 PCDHB7Q9Y5E2 793 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 TSC2P49815 1807 aa12.08□□□□□ -0.48
VCP-204ENST00000466100 AP5Z1O43299 807 aa12.07□□□□□ -0.48
VCP-204ENST00000466100 HOXA2O43364 376 aa12.07□□□□□ -0.48
VCP-204ENST00000466100 B4GALT3O60512 393 aa12.07□□□□□ -0.48
VCP-204ENST00000466100 DGKIO75912 1065 aa12.07□□□□□ -0.48
VCP-204ENST00000466100 DLATP10515 647 aaKnown RBP12.07□□□□□ -0.48
VCP-204ENST00000466100 IBSPP21815 317 aaPredicted RBP12.07□□□□□ -0.48
VCP-204ENST00000466100 GTF2H1P32780 548 aa12.07□□□□□ -0.48
VCP-204ENST00000466100 MTIF2P46199 727 aaKnown RBP12.07□□□□□ -0.48
VCP-204ENST00000466100 SCNN1GP51170 649 aa12.07□□□□□ -0.48
VCP-204ENST00000466100 COPB1P53618 953 aaKnown RBP12.07□□□□□ -0.48
VCP-204ENST00000466100 SOX4Q06945 474 aaPredicted RBP12.07□□□□□ -0.48
VCP-204ENST00000466100 TMEM132DQ14C87 1099 aa12.07□□□□□ -0.48
VCP-204ENST00000466100 CBWD6Q4V339 395 aa12.07□□□□□ -0.48
VCP-204ENST00000466100 DCAF17Q5H9S7 520 aaPredicted RBP12.07□□□□□ -0.48
VCP-204ENST00000466100 CBWD3Q5JTY5 395 aa12.07□□□□□ -0.48
VCP-204ENST00000466100 GLRA4Q5JXX5 417 aa12.07□□□□□ -0.48
VCP-204ENST00000466100 CBWD5Q5RIA9 395 aa12.07□□□□□ -0.48
VCP-204ENST00000466100 C9orf50Q5SZB4 431 aa12.07□□□□□ -0.48
VCP-204ENST00000466100 LMBRD2Q68DH5 695 aaPredicted RBP12.07□□□□□ -0.48
VCP-204ENST00000466100 GLB1LQ6UWU2 654 aa12.07□□□□□ -0.48
VCP-204ENST00000466100 TMCO2Q7Z6W1 182 aaPredicted RBP12.07□□□□□ -0.48
VCP-204ENST00000466100 NT5DC4Q86YG4 428 aa12.07□□□□□ -0.48
VCP-204ENST00000466100 TMEM130Q8N3G9 435 aa12.07□□□□□ -0.48
VCP-204ENST00000466100 RSPH1Q8WYR4 309 aa12.07□□□□□ -0.48
VCP-204ENST00000466100 ZNF689Q96CS4 500 aaPredicted RBP12.07□□□□□ -0.48
VCP-204ENST00000466100 FAM212AQ96EL1 285 aa12.07□□□□□ -0.48
VCP-204ENST00000466100 TSPAN18Q96SJ8 248 aa12.07□□□□□ -0.48
VCP-204ENST00000466100 RNF216Q9NWF9 866 aaPredicted RBP12.07□□□□□ -0.48
VCP-204ENST00000466100 A0A1B0GTH6 734 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 LGALS16A8MUM7 142 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 PMM2O15305 246 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 AFPP02771 609 aaKnown RBP12.06□□□□□ -0.48
VCP-204ENST00000466100 C4BPAP04003 597 aaKnown RBP12.06□□□□□ -0.48
VCP-204ENST00000466100 KCNJ6P48051 423 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 FMO5P49326 533 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 TPM4P67936 248 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 HTRA4P83105 476 aaPredicted RBP12.06□□□□□ -0.48
VCP-204ENST00000466100 FANCCQ00597 558 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 KCNH2Q12809 1159 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 GRIK3Q13003 919 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 UVSSAQ2YD98 709 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 ZACNQ401N2 412 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 VWA3BQ502W6 1294 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 NOMO2Q5JPE7 1267 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 TDRD10Q5VZ19 366 aaKnown RBP12.06□□□□□ -0.48
VCP-204ENST00000466100 SCARA3Q6AZY7 606 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 SARM1Q6SZW1 724 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 USP37Q86T82 979 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 C1orf127Q8N9H9 656 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 C18orf25Q96B23 403 aaPredicted RBP12.06□□□□□ -0.48
VCP-204ENST00000466100 KIF12Q96FN5 646 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 FNBP1Q96RU3 617 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 RPS6KC1Q96S38 1066 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 SLC9A7Q96T83 725 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 MTMR12Q9C0I1 747 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 TMEM117Q9H0C3 514 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 NDST4Q9H3R1 872 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 TMEM8AQ9HCN3 771 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 TBC1D13Q9NVG8 400 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 TUBGCP4Q9UGJ1 667 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 SIX4Q9UIU6 781 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 LRFN2Q9ULH4 789 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 COQ4Q9Y3A0 265 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.06□□□□□ -0.48
VCP-204ENST00000466100 TRIOBPQ9H2D6 2365 aa12.06□□□□□ -0.48
VCP-204ENST00000466100 VWA8A3KMH1 1905 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 ZBBXA8MT70 800 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 CAPN15O75808 1086 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 UPP2O95045 317 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 GJB5O95377 273 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 VNN1O95497 513 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 POMCP01189 267 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 THP07101 528 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 PRKCSHP14314 528 aaPredicted RBP12.05□□□□□ -0.48
VCP-204ENST00000466100 TNNI1P19237 187 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 CYP3A5P20815 502 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 CDK11BP21127 795 aaKnown RBP12.05□□□□□ -0.48
VCP-204ENST00000466100 GCLMP48507 274 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 MXI1P50539 228 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 GUCY2FP51841 1108 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 AP3M2P53677 418 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 TFAMQ00059 246 aaKnown RBP12.05□□□□□ -0.48
VCP-204ENST00000466100 DSC1Q08554 894 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 SHHQ15465 462 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 DUOXA2Q1HG44 320 aa12.05□□□□□ -0.48
VCP-204ENST00000466100 TCERG1LQ5VWI1 586 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms