RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 NOLC1Q14978 699 aaKnown RBP eCLIP6.53□□□□□ -1.36
CHMP3-206ENST00000466032 NR1I3Q14994 352 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 KRT31Q15323 416 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 SNRNP35Q16560 246 aaKnown RBP6.53□□□□□ -1.36
CHMP3-206ENST00000466032 VWA3BQ502W6 1294 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 ATF7IP2Q5U623 682 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 CEP135Q66GS9 1140 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 SPECC1LQ69YQ0 1117 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 SLC27A1Q6PCB7 646 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 CATSPER4Q7RTX7 472 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 ANKRD33Q7Z3H0 272 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 IRF2BP1Q8IU81 584 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 TRIM59Q8IWR1 403 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 DRC7Q8IY82 874 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 CACTINQ8WUQ7 758 aaKnown RBP6.53□□□□□ -1.36
CHMP3-206ENST00000466032 TRAPPC12Q8WVT3 735 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 DNAJB3Q8WWF6 145 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 APBB2Q92870 758 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 HPS3Q969F9 1004 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 LENG1Q96BZ8 264 aaPredicted RBP6.53□□□□□ -1.36
CHMP3-206ENST00000466032 MFSD14AQ96MC6 490 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 MED15Q96RN5 788 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 FNBP1Q96RU3 617 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 MSTO1Q9BUK6 570 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 HSD3B7Q9H2F3 369 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 NDST4Q9H3R1 872 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 YY1AP1Q9H869 796 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 UBN1Q9NPG3 1134 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 FBXL5Q9UKA1 691 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 MYO6Q9UM54 1294 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 DERAQ9Y315 318 aa6.53□□□□□ -1.36
CHMP3-206ENST00000466032 ADGRA3Q8IWK6 1321 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 A0A1W2PQJ5 194 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 PES1O00541 588 aaKnown RBP6.52□□□□□ -1.37
CHMP3-206ENST00000466032 CLIC2O15247 247 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 ZC3H11AO75152 810 aaKnown RBP eCLIP6.52□□□□□ -1.37
CHMP3-206ENST00000466032 RPS6KA5O75582 802 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 AKAP3O75969 853 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 CCDC172P0C7W6 258 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 COL6A1P12109 1028 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 RFC2P35250 354 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 CYP2J2P51589 502 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 VAMP7P51809 220 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 CLDN10P78369 228 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 UBXN1Q04323 297 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 KCNA1Q09470 495 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 DRP2Q13474 957 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 PSMD6Q15008 389 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 SNX17Q15036 470 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 KIZQ2M2Z5 673 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 ZNF568Q3ZCX4 644 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 KRT39Q6A163 491 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 GDF6Q6KF10 455 aaPredicted RBP6.52□□□□□ -1.37
CHMP3-206ENST00000466032 LYPD4Q6UWN0 246 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 GBP6Q6ZN66 633 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 TAS1R3Q7RTX0 852 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 NECAB2Q7Z6G3 386 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 PPFIBP1Q86W92 1011 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 CNGA4Q8IV77 575 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 VSTM4Q8IW00 320 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 CCDC150Q8NCX0 1101 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 GLIS3Q8NEA6 775 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 JAKMIP2Q96AA8 810 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 TARS2Q9BW92 718 aaKnown RBP6.52□□□□□ -1.37
CHMP3-206ENST00000466032 NAA15Q9BXJ9 866 aaKnown RBP6.52□□□□□ -1.37
CHMP3-206ENST00000466032 FGFBP2Q9BYJ0 223 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 TRIM6Q9C030 488 aaPredicted RBP6.52□□□□□ -1.37
CHMP3-206ENST00000466032 XPO4Q9C0E2 1151 aaKnown RBP6.52□□□□□ -1.37
CHMP3-206ENST00000466032 SENP6Q9GZR1 1112 aaPredicted RBP6.52□□□□□ -1.37
CHMP3-206ENST00000466032 DNAI2Q9GZS0 605 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 FAM49AQ9H0Q0 323 aaPredicted RBP6.52□□□□□ -1.37
CHMP3-206ENST00000466032 RPF1Q9H9Y2 349 aaKnown RBP6.52□□□□□ -1.37
CHMP3-206ENST00000466032 TMEM8AQ9HCN3 771 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 PTPRHQ9HD43 1115 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 PLCB1Q9NQ66 1216 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 AGPAT5Q9NUQ2 364 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 IFNKQ9P0W0 207 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 USP20Q9Y2K6 914 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 R3HCC1Q9Y3T6 440 aaKnown RBP6.52□□□□□ -1.37
CHMP3-206ENST00000466032 CDY2AQ9Y6F7 541 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 ZSWIM8A7E2V4 1837 aa6.52□□□□□ -1.37
CHMP3-206ENST00000466032 DPYSL4O14531 572 aa6.51□□□□□ -1.37
CHMP3-206ENST00000466032 B4GALT4O60513 344 aa6.51□□□□□ -1.37
CHMP3-206ENST00000466032 TSPAN1O60635 241 aa6.51□□□□□ -1.37
CHMP3-206ENST00000466032 EFCAB14O75071 495 aa6.51□□□□□ -1.37
CHMP3-206ENST00000466032 ZNF623O75123 536 aa6.51□□□□□ -1.37
CHMP3-206ENST00000466032 EOMESO95936 686 aa6.51□□□□□ -1.37
CHMP3-206ENST00000466032 CD4P01730 458 aa6.51□□□□□ -1.37
CHMP3-206ENST00000466032 PTMAP06454 111 aaKnown RBP6.51□□□□□ -1.37
CHMP3-206ENST00000466032 ADRB2P07550 413 aa6.51□□□□□ -1.37
CHMP3-206ENST00000466032 PFKMP08237 780 aa6.51□□□□□ -1.37
CHMP3-206ENST00000466032 ATP1A3P13637 1013 aa6.51□□□□□ -1.37
CHMP3-206ENST00000466032 SELPP16109 830 aa6.51□□□□□ -1.37
CHMP3-206ENST00000466032 ARF4P18085 180 aaPredicted RBP6.51□□□□□ -1.37
CHMP3-206ENST00000466032 TRIM21P19474 475 aaKnown RBP6.51□□□□□ -1.37
CHMP3-206ENST00000466032 ADSSP30520 456 aa6.51□□□□□ -1.37
CHMP3-206ENST00000466032 GTF2F1P35269 517 aaKnown RBP eCLIP6.51□□□□□ -1.37
CHMP3-206ENST00000466032 THPOP40225 353 aa6.51□□□□□ -1.37
CHMP3-206ENST00000466032 GRM5P41594 1212 aa6.51□□□□□ -1.37
CHMP3-206ENST00000466032 SOX10P56693 466 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms