RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 R3HDMLQ9H3Y0 253 aa20.02■□□□□ 0.8
TSPAN4-210ENST00000464987 DHX33Q9H6R0 707 aaKnown RBP20.02■□□□□ 0.8
TSPAN4-210ENST00000464987 ANKFY1Q9P2R3 1169 aa20.02■□□□□ 0.8
TSPAN4-210ENST00000464987 UVRAGQ9P2Y5 699 aa20.02■□□□□ 0.8
TSPAN4-210ENST00000464987 ANAPC7Q9UJX3 599 aa20.02■□□□□ 0.8
TSPAN4-210ENST00000464987 PTPN22Q9Y2R2 807 aa20.02■□□□□ 0.8
TSPAN4-210ENST00000464987 LTBP3Q9NS15 1303 aa20.02■□□□□ 0.8
TSPAN4-210ENST00000464987 SHBGP04278 402 aa20.02■□□□□ 0.79
TSPAN4-210ENST00000464987 CHRNA3P32297 505 aa20.02■□□□□ 0.79
TSPAN4-210ENST00000464987 CLDN10P78369 228 aa20.02■□□□□ 0.79
TSPAN4-210ENST00000464987 DRP2Q13474 957 aa20.02■□□□□ 0.79
TSPAN4-210ENST00000464987 MTMR3Q13615 1198 aa20.02■□□□□ 0.79
TSPAN4-210ENST00000464987 PSMD6Q15008 389 aa20.02■□□□□ 0.79
TSPAN4-210ENST00000464987 PPP2R5EQ16537 467 aa20.02■□□□□ 0.79
TSPAN4-210ENST00000464987 PCYT2Q99447 389 aa20.02■□□□□ 0.79
TSPAN4-210ENST00000464987 MTFR1LQ9H019 292 aa20.02■□□□□ 0.79
TSPAN4-210ENST00000464987 PORCNQ9H237 461 aa20.02■□□□□ 0.79
TSPAN4-210ENST00000464987 APOBEC3GQ9HC16 384 aaKnown RBP20.02■□□□□ 0.79
TSPAN4-210ENST00000464987 BTBD7Q9P203 1132 aa20.02■□□□□ 0.79
TSPAN4-210ENST00000464987 PCYOX1Q9UHG3 505 aa20.02■□□□□ 0.79
TSPAN4-210ENST00000464987 FEZ2Q9UHY8 353 aaPredicted RBP20.02■□□□□ 0.79
TSPAN4-210ENST00000464987 MROH7Q68CQ1 1323 aa20.01■□□□□ 0.79
TSPAN4-210ENST00000464987 TTLL13PA6NNM8 815 aa20.01■□□□□ 0.79
TSPAN4-210ENST00000464987 STAM2O75886 525 aa20.01■□□□□ 0.79
TSPAN4-210ENST00000464987 RRM1P23921 792 aa20.01■□□□□ 0.79
TSPAN4-210ENST00000464987 SEC24CP53992 1094 aa20.01■□□□□ 0.79
TSPAN4-210ENST00000464987 STRN3Q13033 797 aa20.01■□□□□ 0.79
TSPAN4-210ENST00000464987 BIRC3Q13489 604 aa20.01■□□□□ 0.79
TSPAN4-210ENST00000464987 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.01■□□□□ 0.791e-7■■■□□ 19.2
TSPAN4-210ENST00000464987 FBXO40Q9UH90 709 aa20.01■□□□□ 0.79
TSPAN4-210ENST00000464987 UMODL1Q5DID0 1318 aa20.01■□□□□ 0.79
TSPAN4-210ENST00000464987 CLDN3O15551 220 aa20■□□□□ 0.79
TSPAN4-210ENST00000464987 USP2O75604 605 aaPredicted RBP20■□□□□ 0.79
TSPAN4-210ENST00000464987 SCP2P22307 547 aa20■□□□□ 0.79
TSPAN4-210ENST00000464987 MDH1P40925 334 aaKnown RBP20■□□□□ 0.79
TSPAN4-210ENST00000464987 PIK3CAP42336 1068 aa20■□□□□ 0.79
TSPAN4-210ENST00000464987 ALDH5A1P51649 535 aaPredicted RBP20■□□□□ 0.79
TSPAN4-210ENST00000464987 MCOLN2Q8IZK6 566 aa20■□□□□ 0.79
TSPAN4-210ENST00000464987 MORC4Q8TE76 937 aa20■□□□□ 0.79
TSPAN4-210ENST00000464987 CYFIP2Q96F07 1278 aa20■□□□□ 0.79
TSPAN4-210ENST00000464987 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20■□□□□ 0.795e-7■■■■□ 20.5
TSPAN4-210ENST00000464987 GPRC5DQ9NZD1 345 aa20■□□□□ 0.79
TSPAN4-210ENST00000464987 NOVA2Q9UNW9 492 aaKnown RBP20■□□□□ 0.79
TSPAN4-210ENST00000464987 STYXL1Q9Y6J8 313 aa20■□□□□ 0.79
TSPAN4-210ENST00000464987 K7ERI5 159 aa20■□□□□ 0.79
TSPAN4-210ENST00000464987 HARSP12081 509 aaKnown RBP20■□□□□ 0.79
TSPAN4-210ENST00000464987 UBA1P22314 1058 aaKnown RBP20■□□□□ 0.79
TSPAN4-210ENST00000464987 ICAM3P32942 547 aa20■□□□□ 0.79
TSPAN4-210ENST00000464987 ARL2P36404 184 aa20■□□□□ 0.79
TSPAN4-210ENST00000464987 RWDD2BP57060 319 aa20■□□□□ 0.79
TSPAN4-210ENST00000464987 EEPD1Q7L9B9 569 aa20■□□□□ 0.79
TSPAN4-210ENST00000464987 PASD1Q8IV76 773 aa20■□□□□ 0.79
TSPAN4-210ENST00000464987 DEPTORQ8TB45 409 aa20■□□□□ 0.79
TSPAN4-210ENST00000464987 HERPUD2Q9BSE4 406 aa20■□□□□ 0.79
TSPAN4-210ENST00000464987 MGAMO43451 1857 aa19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 GSTTP1A0A1W2PQM5 241 aa19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 ZC3H11AO75152 810 aaKnown RBP eCLIP19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 HSPA6P17066 643 aa19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 TMOD1P28289 359 aa19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 MAPK4P31152 587 aa19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 COILP38432 576 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 CLUL1Q15846 466 aa19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 KRT71Q3SY84 523 aa19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 CCDC105Q8IYK2 499 aa19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 OR5B17Q8NGF7 314 aa19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 RBAKQ9NYW8 714 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 SNCAIPQ9Y6H5 919 aa19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 O00370 1275 aa19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 NDUFAB1O14561 156 aa19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 ACO1P21399 889 aaKnown RBP19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 VGLL4Q14135 290 aa19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 CYP1B1Q16678 543 aa19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 NOL9Q5SY16 702 aaKnown RBP19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 ENOSF1Q7L5Y1 443 aa19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 NLGN2Q8NFZ4 835 aa19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 RNF25Q96BH1 459 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 RASAL2Q9UJF2 1139 aa19.99■□□□□ 0.79
TSPAN4-210ENST00000464987 FARP2O94887 1054 aaPredicted RBP19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 GGPS1O95749 300 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 NAMPTP43490 491 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 PMS2P54278 862 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 DRG2P55039 364 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 PTGISQ16647 500 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 WDR44Q5JSH3 913 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 DNERQ8NFT8 737 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 C1orf54Q8WWF1 131 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 SLC12A6Q9UHW9 1150 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 PCDHB2Q9Y5E7 798 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 OTOFQ9HC10 1997 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 PAPPA2Q9BXP8 1791 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 MCM3APO60318 1980 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 IGKV6D-21A0A0A0MT36 114 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 H0YCG3 227 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 MAGOHP61326 146 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 SLC20A2Q08357 652 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 CAPSQ13938 189 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 SH3D19Q5HYK7 790 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 TMEM270Q6UE05 265 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 LBX2Q6XYB7 198 aa19.98■□□□□ 0.79
TSPAN4-210ENST00000464987 RUFY4Q6ZNE9 571 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms