RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 ELANEP08246 267 aa5.72□□□□□ -1.49
ITGB1-208ENST00000464001 GSPT1P15170 499 aaKnown RBP5.72□□□□□ -1.49
ITGB1-208ENST00000464001 CD38P28907 300 aa5.72□□□□□ -1.49
ITGB1-208ENST00000464001 GUCY1A2P33402 732 aa5.72□□□□□ -1.49
ITGB1-208ENST00000464001 MCAMP43121 646 aa5.72□□□□□ -1.49
ITGB1-208ENST00000464001 MRPS21P82921 87 aaKnown RBP5.72□□□□□ -1.49
ITGB1-208ENST00000464001 TMPRSS15P98073 1019 aa5.72□□□□□ -1.49
ITGB1-208ENST00000464001 SRSF2Q01130 221 aaKnown RBP5.72□□□□□ -1.49
ITGB1-208ENST00000464001 PPP3CAQ08209 521 aa5.72□□□□□ -1.49
ITGB1-208ENST00000464001 UBXN2BQ14CS0 331 aa5.72□□□□□ -1.49
ITGB1-208ENST00000464001 PRR16Q569H4 304 aa5.72□□□□□ -1.49
ITGB1-208ENST00000464001 SDE2Q6IQ49 451 aa5.72□□□□□ -1.49
ITGB1-208ENST00000464001 SYCE2Q6PIF2 218 aa5.72□□□□□ -1.49
ITGB1-208ENST00000464001 FAM43AQ8N2R8 423 aa5.72□□□□□ -1.49
ITGB1-208ENST00000464001 CASKIN2Q8WXE0 1202 aa5.72□□□□□ -1.49
ITGB1-208ENST00000464001 STON2Q8WXE9 905 aa5.72□□□□□ -1.49
ITGB1-208ENST00000464001 HOXB13Q92826 284 aaPredicted RBP5.72□□□□□ -1.49
ITGB1-208ENST00000464001 CYFIP2Q96F07 1278 aa5.72□□□□□ -1.49
ITGB1-208ENST00000464001 BBC3Q96PG8 261 aaPredicted RBP5.72□□□□□ -1.49
ITGB1-208ENST00000464001 DMRT3Q9NQL9 472 aa5.72□□□□□ -1.49
ITGB1-208ENST00000464001 C14orf119Q9NWQ9 140 aa5.72□□□□□ -1.49
ITGB1-208ENST00000464001 USP35Q9P2H5 1018 aa5.72□□□□□ -1.49
ITGB1-208ENST00000464001 EYA4O95677 639 aa5.71□□□□□ -1.5
ITGB1-208ENST00000464001 TYRP1P17643 537 aa5.71□□□□□ -1.5
ITGB1-208ENST00000464001 FDXRP22570 491 aa5.71□□□□□ -1.5
ITGB1-208ENST00000464001 CLK3P49761 638 aaKnown RBP5.71□□□□□ -1.5
ITGB1-208ENST00000464001 B3GNTL1Q67FW5 361 aaPredicted RBP5.71□□□□□ -1.5
ITGB1-208ENST00000464001 FOXR2Q6PJQ5 311 aa5.71□□□□□ -1.5
ITGB1-208ENST00000464001 CAGE1Q8TC20 777 aa5.71□□□□□ -1.5
ITGB1-208ENST00000464001 RNF31Q96EP0 1072 aa5.71□□□□□ -1.5
ITGB1-208ENST00000464001 BOD1Q96IK1 185 aa5.71□□□□□ -1.5
ITGB1-208ENST00000464001 LDAHQ9H6V9 325 aa5.71□□□□□ -1.5
ITGB1-208ENST00000464001 GALNT9Q9HCQ5 603 aa5.71□□□□□ -1.5
ITGB1-208ENST00000464001 AJAP1Q9UKB5 411 aaPredicted RBP5.71□□□□□ -1.5
ITGB1-208ENST00000464001 COX11Q9Y6N1 276 aa5.71□□□□□ -1.5
ITGB1-208ENST00000464001 MAST3O60307 1309 aa5.71□□□□□ -1.5
ITGB1-208ENST00000464001 FAM171A2A8MVW0 826 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 MASP2O00187 686 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 WNT10BO00744 389 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 FGFR4P22455 802 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 GCSHP23434 173 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 MPLP40238 635 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 GPR3P46089 330 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 ALDH1A3P47895 512 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 OCA2Q04671 838 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 MGAT2Q10469 447 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 ZNF529Q6P280 563 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 SEM1Q6ZVN7 128 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 RD3Q7Z3Z2 195 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 GPR149Q86SP6 731 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 SLC44A3Q8N4M1 653 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 WDR66Q8TBY9 1149 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 NELL1Q92832 810 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 FUBP1Q96AE4 644 aaKnown RBP5.7□□□□□ -1.5
ITGB1-208ENST00000464001 ZSWIM1Q9BR11 485 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 TMEM74BQ9NUR3 256 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 TBCCD1Q9NVR7 557 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 PCDHGA2Q9Y5H1 932 aa5.7□□□□□ -1.5
ITGB1-208ENST00000464001 GPANK1O95872 356 aa5.69□□□□□ -1.5
ITGB1-208ENST00000464001 CKBP12277 381 aa5.69□□□□□ -1.5
ITGB1-208ENST00000464001 ALAS1P13196 640 aa5.69□□□□□ -1.5
ITGB1-208ENST00000464001 CNGA1P29973 690 aa5.69□□□□□ -1.5
ITGB1-208ENST00000464001 MTNR1BP49286 362 aa5.69□□□□□ -1.5
ITGB1-208ENST00000464001 CXADRP78310 365 aa5.69□□□□□ -1.5
ITGB1-208ENST00000464001 SCAPQ12770 1279 aa5.69□□□□□ -1.5
ITGB1-208ENST00000464001 FBXO42Q6P3S6 717 aa5.69□□□□□ -1.5
ITGB1-208ENST00000464001 KRT26Q7Z3Y9 468 aa5.69□□□□□ -1.5
ITGB1-208ENST00000464001 SPATS2Q86XZ4 545 aaKnown RBP5.69□□□□□ -1.5
ITGB1-208ENST00000464001 SIMC1Q8NDZ2 872 aa5.69□□□□□ -1.5
ITGB1-208ENST00000464001 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.69□□□□□ -1.5
ITGB1-208ENST00000464001 Q96MF0 132 aa5.69□□□□□ -1.5
ITGB1-208ENST00000464001 MANSC1Q9H8J5 431 aa5.69□□□□□ -1.5
ITGB1-208ENST00000464001 CCM2LQ9NUG4 571 aaPredicted RBP5.69□□□□□ -1.5
ITGB1-208ENST00000464001 KCNE5Q9UJ90 142 aa5.69□□□□□ -1.5
ITGB1-208ENST00000464001 ACTL7AQ9Y615 435 aa5.69□□□□□ -1.5
ITGB1-208ENST00000464001 WASHC2AQ641Q2 1341 aa5.69□□□□□ -1.5
ITGB1-208ENST00000464001 GPR39O43194 453 aa5.68□□□□□ -1.5
ITGB1-208ENST00000464001 PRKD3O94806 890 aa5.68□□□□□ -1.5
ITGB1-208ENST00000464001 PLA2G5P39877 138 aa5.68□□□□□ -1.5
ITGB1-208ENST00000464001 ELLP55199 621 aaPredicted RBP5.68□□□□□ -1.5
ITGB1-208ENST00000464001 C21orf58P58505 322 aa5.68□□□□□ -1.5
ITGB1-208ENST00000464001 KRTAP1-1Q07627 177 aa5.68□□□□□ -1.5
ITGB1-208ENST00000464001 SEPT2Q15019 361 aa5.68□□□□□ -1.5
ITGB1-208ENST00000464001 RNF219Q5W0B1 726 aaPredicted RBP5.68□□□□□ -1.5
ITGB1-208ENST00000464001 GIMAP6Q6P9H5 292 aa5.68□□□□□ -1.5
ITGB1-208ENST00000464001 RSAD1Q9HA92 442 aa5.68□□□□□ -1.5
ITGB1-208ENST00000464001 CASS4Q9NQ75 786 aa5.68□□□□□ -1.5
ITGB1-208ENST00000464001 ADARB2Q9NS39 739 aaKnown RBP5.68□□□□□ -1.5
ITGB1-208ENST00000464001 SLC23A1Q9UHI7 598 aa5.68□□□□□ -1.5
ITGB1-208ENST00000464001 DNM3Q9UQ16 869 aa5.68□□□□□ -1.5
ITGB1-208ENST00000464001 SIK3Q9Y2K2 1263 aa5.68□□□□□ -1.5
ITGB1-208ENST00000464001 MTO1Q9Y2Z2 717 aaKnown RBP5.68□□□□□ -1.5
ITGB1-208ENST00000464001 SPATA31A6Q5VVP1 1343 aa5.68□□□□□ -1.5
ITGB1-208ENST00000464001 GPR32O75388 356 aa5.67□□□□□ -1.5
ITGB1-208ENST00000464001 OSMP13725 252 aa5.67□□□□□ -1.5
ITGB1-208ENST00000464001 FPR1P21462 350 aa5.67□□□□□ -1.5
ITGB1-208ENST00000464001 SLC6A2P23975 617 aa5.67□□□□□ -1.5
ITGB1-208ENST00000464001 SLC6A9P48067 706 aa5.67□□□□□ -1.5
ITGB1-208ENST00000464001 HSD11B2P80365 405 aa5.67□□□□□ -1.5
ITGB1-208ENST00000464001 ATP2B3Q16720 1220 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms