RNA–Protein interactions for RNA: ENST00000463809.1

CCDC144A-211, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-211ENST00000463809 ZNF529Q6P280 563 aa8.22□□□□□ -1.09
CCDC144A-211ENST00000463809 KCNV1Q6PIU1 500 aa8.22□□□□□ -1.09
CCDC144A-211ENST00000463809 RHOT1Q8IXI2 618 aa8.22□□□□□ -1.09
CCDC144A-211ENST00000463809 ZCRB1Q8TBF4 217 aaKnown RBP8.22□□□□□ -1.09
CCDC144A-211ENST00000463809 IKZF4Q9H2S9 585 aa8.22□□□□□ -1.09
CCDC144A-211ENST00000463809 SAP30BPQ9UHR5 308 aaKnown RBP8.22□□□□□ -1.09
CCDC144A-211ENST00000463809 IPPQ9Y573 584 aa8.22□□□□□ -1.09
CCDC144A-211ENST00000463809 MRFAP1Q9Y605 127 aa8.22□□□□□ -1.09
CCDC144A-211ENST00000463809 MARCH11A6NNE9 402 aa8.21□□□□□ -1.1
CCDC144A-211ENST00000463809 SPATA31D3P0C874 917 aa8.21□□□□□ -1.1
CCDC144A-211ENST00000463809 BMPR1AP36894 532 aa8.21□□□□□ -1.1
CCDC144A-211ENST00000463809 PCSK4Q6UW60 755 aa8.21□□□□□ -1.1
CCDC144A-211ENST00000463809 SPATA31D4Q6ZUB0 917 aa8.21□□□□□ -1.1
CCDC144A-211ENST00000463809 VRK3Q8IV63 474 aa8.21□□□□□ -1.1
CCDC144A-211ENST00000463809 OR56A1Q8NGH5 318 aa8.21□□□□□ -1.1
CCDC144A-211ENST00000463809 GPATCH3Q96I76 525 aa8.21□□□□□ -1.1
CCDC144A-211ENST00000463809 ASPSCR1Q9BZE9 553 aa8.21□□□□□ -1.1
CCDC144A-211ENST00000463809 SLC13A1Q9BZW2 595 aa8.21□□□□□ -1.1
CCDC144A-211ENST00000463809 KLHL11Q9NVR0 708 aa8.21□□□□□ -1.1
CCDC144A-211ENST00000463809 FBXO34Q9NWN3 711 aa8.21□□□□□ -1.1
CCDC144A-211ENST00000463809 RUVBL1Q9Y265 456 aaKnown RBP8.21□□□□□ -1.1
CCDC144A-211ENST00000463809 FPGT-TNNI3KV9GXZ4 949 aa8.21□□□□□ -1.1
CCDC144A-211ENST00000463809 SLC6A2P23975 617 aa8.2□□□□□ -1.1
CCDC144A-211ENST00000463809 EDNRBP24530 442 aa8.2□□□□□ -1.1
CCDC144A-211ENST00000463809 SLC16A1P53985 500 aa8.2□□□□□ -1.1
CCDC144A-211ENST00000463809 TARDBPQ13148 414 aaKnown RBP eCLIP8.2□□□□□ -1.1
CCDC144A-211ENST00000463809 ODF1Q14990 250 aa8.2□□□□□ -1.1
CCDC144A-211ENST00000463809 PTPAQ15257 358 aa8.2□□□□□ -1.1
CCDC144A-211ENST00000463809 PTPN21Q16825 1174 aa8.2□□□□□ -1.1
CCDC144A-211ENST00000463809 PTPROQ16827 1216 aa8.2□□□□□ -1.1
CCDC144A-211ENST00000463809 MRGPRGQ86SM5 289 aa8.2□□□□□ -1.1
CCDC144A-211ENST00000463809 ADAM2Q99965 735 aa8.2□□□□□ -1.1
CCDC144A-211ENST00000463809 BRINP2Q9C0B6 783 aa8.2□□□□□ -1.1
CCDC144A-211ENST00000463809 LIMCH1Q9UPQ0 1083 aa8.2□□□□□ -1.1
CCDC144A-211ENST00000463809 ATP11BQ9Y2G3 1177 aa8.2□□□□□ -1.1
CCDC144A-211ENST00000463809 PCDHA13Q9Y5I0 950 aa8.2□□□□□ -1.1
CCDC144A-211ENST00000463809 WDR33Q9C0J8 1336 aaKnown RBP8.2□□□□□ -1.1
CCDC144A-211ENST00000463809 FOXN1O15353 648 aa8.19□□□□□ -1.1
CCDC144A-211ENST00000463809 HTRA2O43464 458 aaPredicted RBP8.19□□□□□ -1.1
CCDC144A-211ENST00000463809 PRSS23O95084 383 aa8.19□□□□□ -1.1
CCDC144A-211ENST00000463809 TSHZ3Q63HK5 1081 aa8.19□□□□□ -1.1
CCDC144A-211ENST00000463809 MIGA2Q7L4E1 593 aa8.19□□□□□ -1.1
CCDC144A-211ENST00000463809 UBE3BQ7Z3V4 1068 aa8.19□□□□□ -1.1
CCDC144A-211ENST00000463809 ARHGEF19Q8IW93 802 aa8.19□□□□□ -1.1
CCDC144A-211ENST00000463809 CPEB3Q8NE35 698 aaKnown RBP8.19□□□□□ -1.1
CCDC144A-211ENST00000463809 RAB24Q969Q5 203 aa8.19□□□□□ -1.1
CCDC144A-211ENST00000463809 HDAC10Q969S8 669 aa8.19□□□□□ -1.1
CCDC144A-211ENST00000463809 COA7Q96BR5 231 aa8.19□□□□□ -1.1
CCDC144A-211ENST00000463809 CEP89Q96ST8 783 aa8.19□□□□□ -1.1
CCDC144A-211ENST00000463809 MAP3K2Q9Y2U5 619 aa8.19□□□□□ -1.1
CCDC144A-211ENST00000463809 A0A087X1B8 175 aa8.18□□□□□ -1.1
CCDC144A-211ENST00000463809 TMEM191CA6NGB0 347 aa8.18□□□□□ -1.1
CCDC144A-211ENST00000463809 CFIP05156 583 aa8.18□□□□□ -1.1
CCDC144A-211ENST00000463809 ELANEP08246 267 aa8.18□□□□□ -1.1
CCDC144A-211ENST00000463809 GCSHP23434 173 aa8.18□□□□□ -1.1
CCDC144A-211ENST00000463809 CTXN1P60606 82 aa8.18□□□□□ -1.1
CCDC144A-211ENST00000463809 CDC42EP1Q00587 391 aa8.18□□□□□ -1.1
CCDC144A-211ENST00000463809 KIF23Q02241 960 aaPredicted RBP8.18□□□□□ -1.1
CCDC144A-211ENST00000463809 C3orf36Q3SXR2 165 aa8.18□□□□□ -1.1
CCDC144A-211ENST00000463809 DACT2Q5SW24 774 aa8.18□□□□□ -1.1
CCDC144A-211ENST00000463809 LAIR1Q6GTX8 287 aa8.18□□□□□ -1.1
CCDC144A-211ENST00000463809 PNMA8AQ86V59 439 aaPredicted RBP8.18□□□□□ -1.1
CCDC144A-211ENST00000463809 DCBLD1Q8N8Z6 715 aa8.18□□□□□ -1.1
CCDC144A-211ENST00000463809 TTPALQ9BTX7 342 aa8.18□□□□□ -1.1
CCDC144A-211ENST00000463809 ANKFY1Q9P2R3 1169 aa8.18□□□□□ -1.1
CCDC144A-211ENST00000463809 SERPINB13Q9UIV8 391 aa8.18□□□□□ -1.1
CCDC144A-211ENST00000463809 COL4A3Q01955 1670 aa8.18□□□□□ -1.1
CCDC144A-211ENST00000463809 GRID2IPA4D2P6 1211 aa8.17□□□□□ -1.1
CCDC144A-211ENST00000463809 CCDC154A6NI56 674 aa8.17□□□□□ -1.1
CCDC144A-211ENST00000463809 HLA-DOAP06340 250 aa8.17□□□□□ -1.1
CCDC144A-211ENST00000463809 DDX6P26196 483 aaKnown RBP eCLIP8.17□□□□□ -1.1
CCDC144A-211ENST00000463809 EFCAB2Q5VUJ9 269 aa8.17□□□□□ -1.1
CCDC144A-211ENST00000463809 MAPKAPK5Q8IW41 473 aa8.17□□□□□ -1.1
CCDC144A-211ENST00000463809 IFI44Q8TCB0 444 aa8.17□□□□□ -1.1
CCDC144A-211ENST00000463809 SMAD5Q99717 465 aaKnown RBP8.17□□□□□ -1.1
CCDC144A-211ENST00000463809 SERHL2Q9H4I8 314 aa8.17□□□□□ -1.1
CCDC144A-211ENST00000463809 SLITRK6Q9H5Y7 841 aa8.17□□□□□ -1.1
CCDC144A-211ENST00000463809 HOMER2Q9NSB8 354 aa8.17□□□□□ -1.1
CCDC144A-211ENST00000463809 TDP1Q9NUW8 608 aa8.17□□□□□ -1.1
CCDC144A-211ENST00000463809 SPEF1Q9Y4P9 236 aa8.17□□□□□ -1.1
CCDC144A-211ENST00000463809 TCRBV7S2A1N4TA0A589 114 aa8.16□□□□□ -1.1
CCDC144A-211ENST00000463809 ANKRD62A6NC57 917 aa8.16□□□□□ -1.1
CCDC144A-211ENST00000463809 SGTAO43765 313 aa8.16□□□□□ -1.1
CCDC144A-211ENST00000463809 RAMP2O60895 175 aa8.16□□□□□ -1.1
CCDC144A-211ENST00000463809 ZEB1P37275 1124 aaPredicted RBP8.16□□□□□ -1.1
CCDC144A-211ENST00000463809 RESTQ13127 1097 aa8.16□□□□□ -1.1
CCDC144A-211ENST00000463809 IL10RAQ13651 578 aa8.16□□□□□ -1.1
CCDC144A-211ENST00000463809 BRDTQ58F21 947 aaPredicted RBP8.16□□□□□ -1.1
CCDC144A-211ENST00000463809 TMX3Q96JJ7 454 aa8.16□□□□□ -1.1
CCDC144A-211ENST00000463809 ZSWIM1Q9BR11 485 aa8.16□□□□□ -1.1
CCDC144A-211ENST00000463809 WDR11Q9BZH6 1224 aa8.16□□□□□ -1.1
CCDC144A-211ENST00000463809 REXO4Q9GZR2 422 aaKnown RBP8.16□□□□□ -1.1
CCDC144A-211ENST00000463809 C11orf54Q9H0W9 315 aaPredicted RBP8.16□□□□□ -1.1
CCDC144A-211ENST00000463809 DMRT1Q9Y5R6 373 aa8.16□□□□□ -1.1
CCDC144A-211ENST00000463809 A0A1B0GTW7 788 aa8.15□□□□□ -1.1
CCDC144A-211ENST00000463809 CCDC78A2IDD5 438 aa8.15□□□□□ -1.1
CCDC144A-211ENST00000463809 UNC119BA6NIH7 251 aa8.15□□□□□ -1.1
CCDC144A-211ENST00000463809 ALAS1P13196 640 aa8.15□□□□□ -1.1
CCDC144A-211ENST00000463809 ADKP55263 362 aaKnown RBP8.15□□□□□ -1.1
CCDC144A-211ENST00000463809 GUCY1B3Q02153 619 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms