RNA–Protein interactions for RNA: ENST00000463809.1

CCDC144A-211, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-211ENST00000463809 AEBP2Q6ZN18 517 aaPredicted RBP36.71■■■■□ 3.47
CCDC144A-211ENST00000463809 CHIC1Q5VXU3 224 aa35.63■■■■□ 3.29
CCDC144A-211ENST00000463809 PHF23Q9BUL5 403 aaPredicted RBP31.34■■■□□ 2.61
CCDC144A-211ENST00000463809 SENP3Q9H4L4 574 aaPredicted RBP31.13■■■□□ 2.57
CCDC144A-211ENST00000463809 FOXD1Q16676 465 aa28.95■■■□□ 2.22
CCDC144A-211ENST00000463809 PLPPR3Q6T4P5 718 aa28.82■■■□□ 2.2
CCDC144A-211ENST00000463809 PPP6R1Q9UPN7 881 aa27.72■■■□□ 2.03
CCDC144A-211ENST00000463809 ADRA2BP18089 450 aa27.66■■■□□ 2.02
CCDC144A-211ENST00000463809 PIAS4Q8N2W9 510 aaPredicted RBP27.22■■□□□ 1.95
CCDC144A-211ENST00000463809 MSH5O43196 834 aa26.73■■□□□ 1.87
CCDC144A-211ENST00000463809 PPP4R3CPQ6ZMV5 832 aa25.38■■□□□ 1.65
CCDC144A-211ENST00000463809 SCAF1Q9H7N4 1312 aaKnown RBP25.26■■□□□ 1.63
CCDC144A-211ENST00000463809 MAPK8IP2Q13387 824 aaPredicted RBP25.17■■□□□ 1.62
CCDC144A-211ENST00000463809 DMRT2Q9Y5R5 561 aa24.83■■□□□ 1.57
CCDC144A-211ENST00000463809 POTEDQ86YR6 584 aa24.73■■□□□ 1.55
CCDC144A-211ENST00000463809 CNKSR2Q8WXI2 1034 aa24.71■■□□□ 1.55
CCDC144A-211ENST00000463809 NCBP3Q53F19 620 aaKnown RBP24.62■■□□□ 1.53
CCDC144A-211ENST00000463809 KCNA4P22459 653 aa24.58■■□□□ 1.53
CCDC144A-211ENST00000463809 NPM3O75607 178 aaKnown RBP24.31■■□□□ 1.48
CCDC144A-211ENST00000463809 RNF216Q9NWF9 866 aaPredicted RBP24.28■■□□□ 1.48
CCDC144A-211ENST00000463809 HOXD11P31277 338 aaPredicted RBP24.25■■□□□ 1.47
CCDC144A-211ENST00000463809 DCAF8L1A6NGE4 600 aa23.72■■□□□ 1.39
CCDC144A-211ENST00000463809 DNAJC5BQ9UF47 199 aa23.66■■□□□ 1.38
CCDC144A-211ENST00000463809 SLC4A1APQ9BWU0 796 aaKnown RBP23.34■■□□□ 1.33
CCDC144A-211ENST00000463809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.07■■□□□ 1.28
CCDC144A-211ENST00000463809 SLC4A2P04920 1241 aa23.02■■□□□ 1.28
CCDC144A-211ENST00000463809 RNF39Q9H2S5 420 aa22.92■■□□□ 1.26
CCDC144A-211ENST00000463809 U3KPZ7 1027 aaPredicted RBP22.71■■□□□ 1.23
CCDC144A-211ENST00000463809 FOXD4L1Q9NU39 408 aa22.65■■□□□ 1.22
CCDC144A-211ENST00000463809 ZBTB22O15209 634 aa22.64■■□□□ 1.21
CCDC144A-211ENST00000463809 C1QBPQ07021 282 aaKnown RBP22.61■■□□□ 1.21
CCDC144A-211ENST00000463809 MYCNP04198 464 aaPredicted RBP22.44■■□□□ 1.18
CCDC144A-211ENST00000463809 CACNB1Q02641 598 aaPredicted RBP22.43■■□□□ 1.18
CCDC144A-211ENST00000463809 EHMT2Q96KQ7 1210 aa22.43■■□□□ 1.18
CCDC144A-211ENST00000463809 CSRNP3Q8WYN3 585 aa22.32■■□□□ 1.16
CCDC144A-211ENST00000463809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.31■■□□□ 1.16
CCDC144A-211ENST00000463809 HNRNPUL2Q1KMD3 747 aaKnown RBP22.31■■□□□ 1.16
CCDC144A-211ENST00000463809 SAMD1Q6SPF0 538 aaPredicted RBP22.23■■□□□ 1.15
CCDC144A-211ENST00000463809 SPINK5Q9NQ38 1064 aaPredicted RBP22.14■■□□□ 1.13
CCDC144A-211ENST00000463809 APLP2Q06481 763 aa22.1■■□□□ 1.13
CCDC144A-211ENST00000463809 CAPN15O75808 1086 aa22.02■■□□□ 1.12
CCDC144A-211ENST00000463809 ATF5Q9Y2D1 282 aaPredicted RBP21.9■■□□□ 1.1
CCDC144A-211ENST00000463809 ATXN8OSP0DMR3 200 aa21.89■■□□□ 1.09
CCDC144A-211ENST00000463809 TRHP20396 242 aaPredicted RBP21.87■■□□□ 1.09
CCDC144A-211ENST00000463809 ZNF219Q9P2Y4 722 aaPredicted RBP21.87■■□□□ 1.09
CCDC144A-211ENST00000463809 DSG3P32926 999 aa21.74■■□□□ 1.07
CCDC144A-211ENST00000463809 ABCB7O75027 752 aa21.6■■□□□ 1.05
CCDC144A-211ENST00000463809 POLA2Q14181 598 aa21.49■■□□□ 1.03
CCDC144A-211ENST00000463809 ZBTB12Q9Y330 459 aaPredicted RBP21.09■□□□□ 0.97
CCDC144A-211ENST00000463809 MKRN4PQ13434 485 aaPredicted RBP20.94■□□□□ 0.94
CCDC144A-211ENST00000463809 FBLN2P98095 1184 aa20.92■□□□□ 0.94
CCDC144A-211ENST00000463809 OSCARQ8IYS5 282 aa20.77■□□□□ 0.92
CCDC144A-211ENST00000463809 RBM42Q9BTD8 480 aaKnown RBP20.68■□□□□ 0.9
CCDC144A-211ENST00000463809 SPDYE2BA6NHP3 402 aa20.54■□□□□ 0.88
CCDC144A-211ENST00000463809 SPDYE6P0CI01 402 aa20.54■□□□□ 0.88
CCDC144A-211ENST00000463809 SPDYE2Q495Y8 402 aa20.54■□□□□ 0.88
CCDC144A-211ENST00000463809 AKT1S1Q96B36 256 aa20.41■□□□□ 0.86
CCDC144A-211ENST00000463809 ZNF692Q9BU19 519 aaPredicted RBP20.41■□□□□ 0.86
CCDC144A-211ENST00000463809 SSUH2Q9Y2M2 353 aa20.38■□□□□ 0.85
CCDC144A-211ENST00000463809 SPDYE4A6NLX3 237 aa20.33■□□□□ 0.85
CCDC144A-211ENST00000463809 REM2Q8IYK8 340 aaPredicted RBP20.22■□□□□ 0.83
CCDC144A-211ENST00000463809 FKBP8Q14318 412 aa20.16■□□□□ 0.82
CCDC144A-211ENST00000463809 PABPN1Q86U42 306 aaKnown RBP eCLIP20.15■□□□□ 0.82
CCDC144A-211ENST00000463809 PROM2Q8N271 834 aa20.02■□□□□ 0.8
CCDC144A-211ENST00000463809 PITPNM1O00562 1244 aa19.99■□□□□ 0.79
CCDC144A-211ENST00000463809 SPDYE1Q8NFV5 336 aaPredicted RBP19.96■□□□□ 0.79
CCDC144A-211ENST00000463809 CHRDL2Q6WN34 429 aa19.93■□□□□ 0.78
CCDC144A-211ENST00000463809 CLEC11AQ9Y240 323 aa19.87■□□□□ 0.77
CCDC144A-211ENST00000463809 STAG3Q9UJ98 1225 aa19.75■□□□□ 0.75
CCDC144A-211ENST00000463809 PRR29P0C7W0 189 aa19.67■□□□□ 0.74
CCDC144A-211ENST00000463809 FXR2P51116 673 aaKnown RBP eCLIP19.67■□□□□ 0.74
CCDC144A-211ENST00000463809 PIP4P2Q8N4L2 257 aa19.64■□□□□ 0.73
CCDC144A-211ENST00000463809 POTEHQ6S545 545 aa19.53■□□□□ 0.72
CCDC144A-211ENST00000463809 PRKAR2AP13861 404 aaKnown RBP19.47■□□□□ 0.71
CCDC144A-211ENST00000463809 FBXO3Q9UK99 471 aa19.47■□□□□ 0.71
CCDC144A-211ENST00000463809 CHADLQ6NUI6 762 aa19.44■□□□□ 0.7
CCDC144A-211ENST00000463809 CREBZFQ9NS37 354 aa19.41■□□□□ 0.7
CCDC144A-211ENST00000463809 MIER1Q8N108 512 aa19.28■□□□□ 0.68
CCDC144A-211ENST00000463809 VASPP50552 380 aaPredicted RBP19.25■□□□□ 0.67
CCDC144A-211ENST00000463809 FARP1Q9Y4F1 1045 aaPredicted RBP19.24■□□□□ 0.67
CCDC144A-211ENST00000463809 PLCD3Q8N3E9 789 aa19.23■□□□□ 0.67
CCDC144A-211ENST00000463809 MNX1P50219 401 aaPredicted RBP19.21■□□□□ 0.67
CCDC144A-211ENST00000463809 PLEKHG5O94827 1062 aa19.16■□□□□ 0.66
CCDC144A-211ENST00000463809 NPM1P06748 294 aaKnown RBP eCLIP19.04■□□□□ 0.64
CCDC144A-211ENST00000463809 HAX1O00165 279 aa19.03■□□□□ 0.64
CCDC144A-211ENST00000463809 ZBTB47Q9UFB7 747 aaPredicted RBP19.02■□□□□ 0.64
CCDC144A-211ENST00000463809 C19orf67A6NJJ6 358 aa19■□□□□ 0.63
CCDC144A-211ENST00000463809 IFNLR1Q8IU57 520 aaPredicted RBP18.99■□□□□ 0.63
CCDC144A-211ENST00000463809 EVX2Q03828 476 aa18.92■□□□□ 0.62
CCDC144A-211ENST00000463809 KLHL34Q8N239 644 aa18.92■□□□□ 0.62
CCDC144A-211ENST00000463809 CD44P16070 742 aaKnown RBP18.9■□□□□ 0.62
CCDC144A-211ENST00000463809 NUBP1P53384 320 aa18.86■□□□□ 0.61
CCDC144A-211ENST00000463809 RASEFQ8IZ41 740 aa18.82■□□□□ 0.6
CCDC144A-211ENST00000463809 SPOCK2Q92563 424 aa18.76■□□□□ 0.59
CCDC144A-211ENST00000463809 ZRANB1Q9UGI0 708 aa18.76■□□□□ 0.59
CCDC144A-211ENST00000463809 PAK3O75914 559 aaPredicted RBP18.75■□□□□ 0.59
CCDC144A-211ENST00000463809 TSPYL2Q9H2G4 693 aaPredicted RBP18.74■□□□□ 0.59
CCDC144A-211ENST00000463809 SP7Q8TDD2 431 aaPredicted RBP18.69■□□□□ 0.58
CCDC144A-211ENST00000463809 ZNF579Q8NAF0 562 aaKnown RBP18.67■□□□□ 0.58
CCDC144A-211ENST00000463809 FAM212AQ96EL1 285 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms