RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 MXI1P50539 228 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 CD300CQ08708 224 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 EIF2B5Q13144 721 aaKnown RBP3.84□□□□□ -1.8
COL8A1-205ENST00000463753 C16orf72Q14CZ0 275 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 NECTIN1Q15223 517 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 BCL2A1Q16548 175 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 MYLK3Q32MK0 819 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 EML3Q32P44 896 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 RABL6Q3YEC7 729 aaPredicted RBP3.84□□□□□ -1.8
COL8A1-205ENST00000463753 KHDC1Q4VXA5 237 aaKnown RBP3.84□□□□□ -1.8
COL8A1-205ENST00000463753 MRPL14Q6P1L8 145 aaKnown RBP3.84□□□□□ -1.8
COL8A1-205ENST00000463753 CCDC174Q6PII3 467 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 B3GNT6Q6ZMB0 384 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 LRRC74BQ6ZQY2 392 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 RFPL4BQ6ZWI9 263 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 INTS8Q75QN2 995 aaKnown RBP3.84□□□□□ -1.8
COL8A1-205ENST00000463753 BMP8AQ7Z5Y6 402 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 NOP9Q86U38 636 aaKnown RBP3.84□□□□□ -1.8
COL8A1-205ENST00000463753 METTL16Q86W50 562 aaKnown RBP3.84□□□□□ -1.8
COL8A1-205ENST00000463753 ANKMY2Q8IV38 441 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 FOXP4Q8IVH2 680 aaPredicted RBP3.84□□□□□ -1.8
COL8A1-205ENST00000463753 ESX1Q8N693 406 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 ANKRD13CQ8N6S4 541 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 DTX3Q8N9I9 347 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 RNF169Q8NCN4 708 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 DDHD1Q8NEL9 900 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 SUN5Q8TC36 379 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 U2AF1L4Q8WU68 220 aaKnown RBP3.84□□□□□ -1.8
COL8A1-205ENST00000463753 NRG4Q8WWG1 115 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 STARD8Q92502 1023 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 SHISA4Q96DD7 197 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 PBKQ96KB5 322 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 ZNF317Q96PQ6 595 aaPredicted RBP3.84□□□□□ -1.8
COL8A1-205ENST00000463753 HAUS7Q99871 368 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 TSEN34Q9BSV6 310 aaKnown RBP3.84□□□□□ -1.8
COL8A1-205ENST00000463753 BHMT2Q9H2M3 363 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 DENND2DQ9H6A0 471 aaPredicted RBP3.84□□□□□ -1.8
COL8A1-205ENST00000463753 CNOT10Q9H9A5 744 aaKnown RBP3.84□□□□□ -1.8
COL8A1-205ENST00000463753 MLXIPQ9HAP2 919 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 IFT122Q9HBG6 1241 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 GJB4Q9NTQ9 266 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 TAB2Q9NYJ8 693 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 VPS51Q9UID3 782 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 TUBE1Q9UJT0 475 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 FBXL5Q9UKA1 691 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 MAN1B1Q9UKM7 699 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 PPP1R9AQ9ULJ8 1098 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 TTLL3Q9Y4R7 772 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 PCDHGA8Q9Y5G5 932 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 PCDHGA3Q9Y5H0 932 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 HEMK1Q9Y5R4 338 aaPredicted RBP3.84□□□□□ -1.8
COL8A1-205ENST00000463753 USP42Q9H9J4 1324 aaKnown RBP3.84□□□□□ -1.8
COL8A1-205ENST00000463753 FRMPD3Q5JV73 1810 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 KANSL1LA0AUZ9 987 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 WDR91A4D1P6 747 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 USP17L3A6NCW0 530 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 USP17L4A6NCW7 530 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 TTC34A8MYJ7 566 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 TCP11X1B4DZS4 312 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 GOLGA8TH3BQL2 631 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 TXNDC9O14530 226 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 TTI1O43156 1089 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 SNX3O60493 162 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 FOXD2O60548 495 aaPredicted RBP3.83□□□□□ -1.8
COL8A1-205ENST00000463753 STAM2O75886 525 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 SEC24DO94855 1032 aaPredicted RBP3.83□□□□□ -1.8
COL8A1-205ENST00000463753 LMNAP02545 664 aaKnown RBP3.83□□□□□ -1.8
COL8A1-205ENST00000463753 AFPP02771 609 aaKnown RBP3.83□□□□□ -1.8
COL8A1-205ENST00000463753 GOLGA8HP0CJ92 632 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 ERCC5P28715 1186 aaPredicted RBP3.83□□□□□ -1.8
COL8A1-205ENST00000463753 PHBP35232 272 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 HOXD13P35453 343 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 STK11Q15831 433 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 UAP1Q16222 522 aaPredicted RBP3.83□□□□□ -1.8
COL8A1-205ENST00000463753 WDR72Q3MJ13 1102 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 ARL13BQ3SXY8 428 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 CMPK2Q5EBM0 449 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 DEPDC1Q5TB30 811 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 ZCCHC8Q6NZY4 707 aaKnown RBP3.83□□□□□ -1.8
COL8A1-205ENST00000463753 USP17L2Q6R6M4 530 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 IZUMO2Q6UXV1 221 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 ASRGL1Q7L266 308 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 USP17L1Q7RTZ2 530 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 CATIPQ7Z7H3 387 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 PHLDB2Q86SQ0 1253 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 RSPH3Q86UC2 560 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 ANKRD13BQ86YJ7 626 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 SMYD4Q8IYR2 804 aaPredicted RBP3.83□□□□□ -1.8
COL8A1-205ENST00000463753 ALDH16A1Q8IZ83 802 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 CACTIN-AS1Q8N1I8 211 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 PAF1Q8N7H5 531 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 VPS37AQ8NEZ2 397 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 DIS3LQ8TF46 1054 aaKnown RBP3.83□□□□□ -1.8
COL8A1-205ENST00000463753 STMN2Q93045 179 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 CCDC51Q96ER9 411 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 TRIM47Q96LD4 638 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 CYTH2Q99418 400 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 ZNF184Q99676 751 aaPredicted RBP3.83□□□□□ -1.8
COL8A1-205ENST00000463753 CEP72Q9P209 647 aa3.83□□□□□ -1.8
COL8A1-205ENST00000463753 LRWD1Q9UFC0 647 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms