RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 TMEM161BQ8NDZ6 487 aa24.27■■□□□ 1.48
PDLIM7-206ENST00000463411 ZNF707Q96C28 371 aaPredicted RBP24.27■■□□□ 1.48
PDLIM7-206ENST00000463411 DDX27Q96GQ7 796 aaKnown RBP24.27■■□□□ 1.48
PDLIM7-206ENST00000463411 CLSTN3Q9BQT9 956 aa24.27■■□□□ 1.48
PDLIM7-206ENST00000463411 PRKD2Q9BZL6 878 aa24.27■■□□□ 1.48
PDLIM7-206ENST00000463411 GOLGA2P5Q9HBQ8 144 aa24.27■■□□□ 1.48
PDLIM7-206ENST00000463411 IGSF9Q9P2J2 1179 aa24.27■■□□□ 1.48
PDLIM7-206ENST00000463411 ODF2LQ9ULJ1 636 aa24.27■■□□□ 1.48
PDLIM7-206ENST00000463411 PAPLNO95428 1278 aa24.26■■□□□ 1.47
PDLIM7-206ENST00000463411 MAPTP10636 758 aaKnown RBP24.26■■□□□ 1.47
PDLIM7-206ENST00000463411 FGFR3P22607 806 aa24.26■■□□□ 1.47
PDLIM7-206ENST00000463411 MATR3P43243 847 aaKnown RBP eCLIP24.26■■□□□ 1.47
PDLIM7-206ENST00000463411 PTPN5P54829 565 aa24.26■■□□□ 1.47
PDLIM7-206ENST00000463411 TDGQ13569 410 aa24.26■■□□□ 1.47
PDLIM7-206ENST00000463411 XKR4Q5GH76 650 aa24.26■■□□□ 1.47
PDLIM7-206ENST00000463411 ZPBP2Q6X784 338 aa24.26■■□□□ 1.47
PDLIM7-206ENST00000463411 BICD1Q96G01 975 aa24.26■■□□□ 1.47
PDLIM7-206ENST00000463411 SMOC2Q9H3U7 446 aa24.26■■□□□ 1.47
PDLIM7-206ENST00000463411 HNRNPA1P09651 372 aaKnown RBP eCLIP24.25■■□□□ 1.47
PDLIM7-206ENST00000463411 CACNB1Q02641 598 aaPredicted RBP24.25■■□□□ 1.47
PDLIM7-206ENST00000463411 SF3A1Q15459 793 aaKnown RBP24.25■■□□□ 1.47
PDLIM7-206ENST00000463411 PPM1LQ5SGD2 360 aa24.25■■□□□ 1.47
PDLIM7-206ENST00000463411 ALKAL1Q6UXT8 129 aa24.25■■□□□ 1.47
PDLIM7-206ENST00000463411 GPBP1Q86WP2 473 aa24.25■■□□□ 1.47
PDLIM7-206ENST00000463411 MFSD1Q9H3U5 465 aa24.25■■□□□ 1.47
PDLIM7-206ENST00000463411 KCNK12Q9HB15 430 aa24.25■■□□□ 1.47
PDLIM7-206ENST00000463411 CNTN3Q9P232 1028 aa24.25■■□□□ 1.47
PDLIM7-206ENST00000463411 PDCD11Q14690 1871 aaKnown RBP24.25■■□□□ 1.47
PDLIM7-206ENST00000463411 NPHP3-ACAD11A0A0J9YXS1 232 aa24.24■■□□□ 1.47
PDLIM7-206ENST00000463411 ABLIM1O14639 778 aa24.24■■□□□ 1.47
PDLIM7-206ENST00000463411 CLDN3O15551 220 aa24.24■■□□□ 1.47
PDLIM7-206ENST00000463411 PDGFBP01127 241 aaPredicted RBP24.24■■□□□ 1.47
PDLIM7-206ENST00000463411 KRT18P05783 430 aaKnown RBP24.24■■□□□ 1.47
PDLIM7-206ENST00000463411 HSP90AA1P07900 732 aaKnown RBP24.24■■□□□ 1.47
PDLIM7-206ENST00000463411 KCNE1P15382 129 aa24.24■■□□□ 1.47
PDLIM7-206ENST00000463411 SCP2P22307 547 aa24.24■■□□□ 1.47
PDLIM7-206ENST00000463411 VCPP55072 806 aaKnown RBP24.24■■□□□ 1.47
PDLIM7-206ENST00000463411 ANKS3Q6ZW76 656 aa24.24■■□□□ 1.47
PDLIM7-206ENST00000463411 GET4Q7L5D6 327 aaPredicted RBP24.24■■□□□ 1.47
PDLIM7-206ENST00000463411 PRSS33Q8NF86 280 aa24.24■■□□□ 1.47
PDLIM7-206ENST00000463411 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.24■■□□□ 1.47
PDLIM7-206ENST00000463411 MTRRQ9UBK8 725 aa24.24■■□□□ 1.47
PDLIM7-206ENST00000463411 ZDBF2Q9HCK1 2354 aa24.23■■□□□ 1.47
PDLIM7-206ENST00000463411 PODXLO00592 558 aa24.23■■□□□ 1.47
PDLIM7-206ENST00000463411 FAM13AO94988 1023 aa24.23■■□□□ 1.47
PDLIM7-206ENST00000463411 C8AP07357 584 aa24.23■■□□□ 1.47
PDLIM7-206ENST00000463411 TKTP29401 623 aaKnown RBP24.23■■□□□ 1.47
PDLIM7-206ENST00000463411 AVPR2P30518 371 aa24.23■■□□□ 1.47
PDLIM7-206ENST00000463411 NCKAP1LP55160 1127 aa24.23■■□□□ 1.47
PDLIM7-206ENST00000463411 DHX8Q14562 1220 aaKnown RBP24.23■■□□□ 1.47
PDLIM7-206ENST00000463411 IER5LQ5T953 404 aa24.23■■□□□ 1.47
PDLIM7-206ENST00000463411 ZBTB45Q96K62 511 aaPredicted RBP24.23■■□□□ 1.47
PDLIM7-206ENST00000463411 REEP2Q9BRK0 252 aa24.23■■□□□ 1.47
PDLIM7-206ENST00000463411 EPS15L1Q9UBC2 864 aa24.23■■□□□ 1.47
PDLIM7-206ENST00000463411 DUSP12Q9UNI6 340 aa24.23■■□□□ 1.47
PDLIM7-206ENST00000463411 NUB1Q9Y5A7 615 aa24.23■■□□□ 1.47
PDLIM7-206ENST00000463411 N4BP1O75113 896 aaKnown RBP24.22■■□□□ 1.47
PDLIM7-206ENST00000463411 XYLBO75191 536 aa24.22■■□□□ 1.47
PDLIM7-206ENST00000463411 PLCG1P19174 1290 aa24.22■■□□□ 1.47
PDLIM7-206ENST00000463411 HOXA9P31269 272 aa24.22■■□□□ 1.47
PDLIM7-206ENST00000463411 RPL9P32969 192 aaKnown RBP24.22■■□□□ 1.47
PDLIM7-206ENST00000463411 OR1D2P34982 312 aa24.22■■□□□ 1.47
PDLIM7-206ENST00000463411 SOX4Q06945 474 aaPredicted RBP24.22■■□□□ 1.47
PDLIM7-206ENST00000463411 MCL1Q07820 350 aa24.22■■□□□ 1.47
PDLIM7-206ENST00000463411 RAB33AQ14088 237 aa24.22■■□□□ 1.47
PDLIM7-206ENST00000463411 ARSHQ5FYA8 562 aa24.22■■□□□ 1.47
PDLIM7-206ENST00000463411 HAUS6Q7Z4H7 955 aa24.22■■□□□ 1.47
PDLIM7-206ENST00000463411 C3orf58Q8NDZ4 430 aa24.22■■□□□ 1.47
PDLIM7-206ENST00000463411 ZMAT2Q96NC0 199 aaKnown RBP24.22■■□□□ 1.47
PDLIM7-206ENST00000463411 MYADMQ96S97 322 aa24.22■■□□□ 1.47
PDLIM7-206ENST00000463411 FBXL21Q9UKT6 434 aa24.22■■□□□ 1.47
PDLIM7-206ENST00000463411 BACE2Q9Y5Z0 518 aa24.22■■□□□ 1.47
PDLIM7-206ENST00000463411 CDY1Q9Y6F8 540 aa24.22■■□□□ 1.47
PDLIM7-206ENST00000463411 I3L4J1 428 aa24.21■■□□□ 1.47
PDLIM7-206ENST00000463411 K7ENM7 598 aa24.21■■□□□ 1.47
PDLIM7-206ENST00000463411 TBCAO75347 108 aaKnown RBP24.21■■□□□ 1.47
PDLIM7-206ENST00000463411 BRCC3P46736 316 aa24.21■■□□□ 1.47
PDLIM7-206ENST00000463411 LIG4P49917 911 aa24.21■■□□□ 1.47
PDLIM7-206ENST00000463411 NUBP1P53384 320 aa24.21■■□□□ 1.47
PDLIM7-206ENST00000463411 KARSQ15046 597 aaKnown RBP24.21■■□□□ 1.47
PDLIM7-206ENST00000463411 MYCT1Q8N699 235 aa24.21■■□□□ 1.47
PDLIM7-206ENST00000463411 SLC7A14Q8TBB6 771 aa24.21■■□□□ 1.47
PDLIM7-206ENST00000463411 RAD54LQ92698 747 aa24.21■■□□□ 1.47
PDLIM7-206ENST00000463411 NXPE3Q969Y0 559 aa24.21■■□□□ 1.47
PDLIM7-206ENST00000463411 IPO9Q96P70 1041 aaKnown RBP24.21■■□□□ 1.47
PDLIM7-206ENST00000463411 PARVGQ9HBI0 331 aa24.21■■□□□ 1.47
PDLIM7-206ENST00000463411 POLIQ9UNA4 740 aa24.21■■□□□ 1.47
PDLIM7-206ENST00000463411 HNRNPDLO14979 420 aaKnown RBP24.2■■□□□ 1.46
PDLIM7-206ENST00000463411 ADAM12O43184 909 aa24.2■■□□□ 1.46
PDLIM7-206ENST00000463411 FSHRP23945 695 aa24.2■■□□□ 1.46
PDLIM7-206ENST00000463411 ABCD1P33897 745 aa24.2■■□□□ 1.46
PDLIM7-206ENST00000463411 GRIN1Q05586 938 aa24.2■■□□□ 1.46
PDLIM7-206ENST00000463411 KYAT1Q16773 422 aa24.2■■□□□ 1.46
PDLIM7-206ENST00000463411 AXDND1Q5T1B0 1012 aaPredicted RBP24.2■■□□□ 1.46
PDLIM7-206ENST00000463411 CD300LGQ6UXG3 332 aa24.2■■□□□ 1.46
PDLIM7-206ENST00000463411 ALYREFQ86V81 257 aaKnown RBP24.2■■□□□ 1.46
PDLIM7-206ENST00000463411 LARP4BQ92615 738 aaKnown RBP24.2■■□□□ 1.46
PDLIM7-206ENST00000463411 IRF2BPLQ9H1B7 796 aa24.2■■□□□ 1.46
PDLIM7-206ENST00000463411 ZHX3Q9H4I2 956 aa24.2■■□□□ 1.46
PDLIM7-206ENST00000463411 BLOC1S4Q9NUP1 217 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms