RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 TDRD5Q8NAT2 981 aaKnown RBP14.3□□□□□ -0.12
HDAC1-203ENST00000463172 LINC00301Q8NCQ3 95 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 PIK3R5Q8WYR1 880 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 RABGGTAQ92696 567 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 STAMQ92783 540 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 HVCN1Q96D96 273 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 CLIC6Q96NY7 704 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 CNTN3Q9P232 1028 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 CFAP45Q9UL16 551 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 EXOC7Q9UPT5 735 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 HCN4Q9Y3Q4 1203 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 NUB1Q9Y5A7 615 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 PDCD11Q14690 1871 aaKnown RBP14.29□□□□□ -0.12
HDAC1-203ENST00000463172 PRR33A8MZF0 331 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 F8W810 466 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 PODXLO00592 558 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 PIGRP01833 764 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 CLCNKBP51801 687 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 AMPD3Q01432 767 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 PPP2R3AQ06190 1150 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 ALCAMQ13740 583 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 UPP1Q16831 310 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 LIN9Q5TKA1 542 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 ANKS3Q6ZW76 656 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 OTOP3Q7RTS5 596 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 DYMQ7RTS9 669 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 PALB2Q86YC2 1186 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 CD302Q8IX05 232 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 C12orf76Q8N812 135 aaPredicted RBP14.29□□□□□ -0.12
HDAC1-203ENST00000463172 KCNG4Q8TDN1 519 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 DDX12PQ92771 950 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 ZBTB45Q96K62 511 aaPredicted RBP14.29□□□□□ -0.12
HDAC1-203ENST00000463172 PAAF1Q9BRP4 392 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 MSTO1Q9BUK6 570 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 RHOBTB2Q9BYZ6 727 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 CUEDC2Q9H467 287 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 ST6GALNAC4Q9H4F1 302 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 POMKQ9H5K3 350 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 PIDD1Q9HB75 910 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 ZDHHC7Q9NXF8 308 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 MUTYHQ9UIF7 546 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 USTQ9Y2C2 406 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 PLXNA3P51805 1871 aa14.29□□□□□ -0.12
HDAC1-203ENST00000463172 CCDC195A0A1B0GUA6 201 aa14.28□□□□□ -0.12
HDAC1-203ENST00000463172 ABLIM1O14639 778 aa14.28□□□□□ -0.12
HDAC1-203ENST00000463172 OGTO15294 1046 aa14.28□□□□□ -0.12
HDAC1-203ENST00000463172 CUTAO60888 179 aa14.28□□□□□ -0.12
HDAC1-203ENST00000463172 F13A1P00488 732 aa14.28□□□□□ -0.12
HDAC1-203ENST00000463172 COL9A1P20849 921 aa14.28□□□□□ -0.12
HDAC1-203ENST00000463172 GTF2BQ00403 316 aa14.28□□□□□ -0.12
HDAC1-203ENST00000463172 POSTNQ15063 836 aa14.28□□□□□ -0.12
HDAC1-203ENST00000463172 RTP2Q5QGT7 225 aa14.28□□□□□ -0.12
HDAC1-203ENST00000463172 STXBP4Q6ZWJ1 553 aa14.28□□□□□ -0.12
HDAC1-203ENST00000463172 USP49Q70CQ1 688 aa14.28□□□□□ -0.12
HDAC1-203ENST00000463172 MAP4K3Q8IVH8 894 aa14.28□□□□□ -0.12
HDAC1-203ENST00000463172 GLYCTKQ8IVS8 523 aa14.28□□□□□ -0.12
HDAC1-203ENST00000463172 EDAQ92838 391 aa14.28□□□□□ -0.12
HDAC1-203ENST00000463172 KHSRPQ92945 711 aaKnown RBP eCLIP14.28□□□□□ -0.12
HDAC1-203ENST00000463172 B3GALT6Q96L58 329 aa14.28□□□□□ -0.12
HDAC1-203ENST00000463172 PYM1Q9BRP8 204 aaKnown RBP14.28□□□□□ -0.12
HDAC1-203ENST00000463172 LRFN3Q9BTN0 628 aa14.28□□□□□ -0.12
HDAC1-203ENST00000463172 MRPL44Q9H9J2 332 aaKnown RBP14.28□□□□□ -0.12
HDAC1-203ENST00000463172 RPF1Q9H9Y2 349 aaKnown RBP14.28□□□□□ -0.12
HDAC1-203ENST00000463172 H7C4K7 107 aa14.27□□□□□ -0.13
HDAC1-203ENST00000463172 SYN3O14994 580 aa14.27□□□□□ -0.13
HDAC1-203ENST00000463172 TGM5O43548 720 aa14.27□□□□□ -0.13
HDAC1-203ENST00000463172 IDEP14735 1019 aa14.27□□□□□ -0.13
HDAC1-203ENST00000463172 FGFR3P22607 806 aa14.27□□□□□ -0.13
HDAC1-203ENST00000463172 FOXD4L5Q5VV16 416 aaPredicted RBP14.27□□□□□ -0.13
HDAC1-203ENST00000463172 PRSS55Q6UWB4 352 aaPredicted RBP14.27□□□□□ -0.13
HDAC1-203ENST00000463172 CCDC65Q8IXS2 484 aa14.27□□□□□ -0.13
HDAC1-203ENST00000463172 IQUBQ8NA54 791 aa14.27□□□□□ -0.13
HDAC1-203ENST00000463172 KREMEN2Q8NCW0 462 aa14.27□□□□□ -0.13
HDAC1-203ENST00000463172 APPL2Q8NEU8 664 aa14.27□□□□□ -0.13
HDAC1-203ENST00000463172 LNX1Q8TBB1 728 aaPredicted RBP14.27□□□□□ -0.13
HDAC1-203ENST00000463172 FOXD4L4Q8WXT5 416 aaPredicted RBP14.27□□□□□ -0.13
HDAC1-203ENST00000463172 KIF12Q96FN5 646 aa14.27□□□□□ -0.13
HDAC1-203ENST00000463172 TNMDQ9H2S6 317 aa14.27□□□□□ -0.13
HDAC1-203ENST00000463172 GOLGA2P5Q9HBQ8 144 aa14.27□□□□□ -0.13
HDAC1-203ENST00000463172 FAM13BQ9NYF5 915 aa14.27□□□□□ -0.13
HDAC1-203ENST00000463172 TFIP11Q9UBB9 837 aaKnown RBP14.27□□□□□ -0.13
HDAC1-203ENST00000463172 CACNG4Q9UBN1 327 aa14.27□□□□□ -0.13
HDAC1-203ENST00000463172 UBQLN1Q9UMX0 589 aaKnown RBP14.27□□□□□ -0.13
HDAC1-203ENST00000463172 PCDHB13Q9Y5F0 798 aa14.27□□□□□ -0.13
HDAC1-203ENST00000463172 VWA8A3KMH1 1905 aa14.27□□□□□ -0.13
HDAC1-203ENST00000463172 C2orf16Q68DN1 1984 aa14.26□□□□□ -0.13
HDAC1-203ENST00000463172 ARHGEF37A1IGU5 675 aa14.26□□□□□ -0.13
HDAC1-203ENST00000463172 FAM86C2PA6NEL3 165 aa14.26□□□□□ -0.13
HDAC1-203ENST00000463172 XYLBO75191 536 aa14.26□□□□□ -0.13
HDAC1-203ENST00000463172 HNRNPA1P09651 372 aaKnown RBP eCLIP14.26□□□□□ -0.13
HDAC1-203ENST00000463172 WEE2P0C1S8 567 aa14.26□□□□□ -0.13
HDAC1-203ENST00000463172 CXCL8P10145 99 aa14.26□□□□□ -0.13
HDAC1-203ENST00000463172 RPL17P18621 184 aaKnown RBP14.26□□□□□ -0.13
HDAC1-203ENST00000463172 CYP3A5P20815 502 aa14.26□□□□□ -0.13
HDAC1-203ENST00000463172 SP100P23497 879 aaPredicted RBP14.26□□□□□ -0.13
HDAC1-203ENST00000463172 PAX3P23760 479 aa14.26□□□□□ -0.13
HDAC1-203ENST00000463172 NMT1P30419 496 aaKnown RBP14.26□□□□□ -0.13
HDAC1-203ENST00000463172 MCM4P33991 863 aa14.26□□□□□ -0.13
HDAC1-203ENST00000463172 ME1P48163 572 aa14.26□□□□□ -0.13
HDAC1-203ENST00000463172 PTPN21Q16825 1174 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms