RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 LILRB5O75023 590 aa17.32■□□□□ 0.36
SND1-203ENST00000463020 BAG4O95429 457 aaKnown RBP17.32■□□□□ 0.36
SND1-203ENST00000463020 THP07101 528 aa17.32■□□□□ 0.36
SND1-203ENST00000463020 LIG1P18858 919 aa17.32■□□□□ 0.36
SND1-203ENST00000463020 KRT2P35908 639 aa17.32■□□□□ 0.36
SND1-203ENST00000463020 BRCC3P46736 316 aa17.32■□□□□ 0.36
SND1-203ENST00000463020 CLCNKBP51801 687 aa17.32■□□□□ 0.36
SND1-203ENST00000463020 PRKCQQ04759 706 aa17.32■□□□□ 0.36
SND1-203ENST00000463020 SOX4Q06945 474 aaPredicted RBP17.32■□□□□ 0.36
SND1-203ENST00000463020 FAM187BQ17R55 369 aa17.32■□□□□ 0.36
SND1-203ENST00000463020 TANGO2Q6ICL3 276 aa17.32■□□□□ 0.36
SND1-203ENST00000463020 TMEM130Q8N3G9 435 aa17.32■□□□□ 0.36
SND1-203ENST00000463020 NECAB1Q8N987 351 aa17.32■□□□□ 0.36
SND1-203ENST00000463020 ZBTB44Q8NCP5 570 aa17.32■□□□□ 0.36
SND1-203ENST00000463020 CLDN23Q96B33 292 aa17.32■□□□□ 0.36
SND1-203ENST00000463020 TCEAL4Q96EI5 215 aa17.32■□□□□ 0.36
SND1-203ENST00000463020 DDX27Q96GQ7 796 aaKnown RBP17.32■□□□□ 0.36
SND1-203ENST00000463020 PRMT7Q9NVM4 692 aaPredicted RBP17.32■□□□□ 0.36
SND1-203ENST00000463020 ORC3Q9UBD5 711 aaPredicted RBP17.32■□□□□ 0.36
SND1-203ENST00000463020 FBXO4Q9UKT5 387 aa17.32■□□□□ 0.36
SND1-203ENST00000463020 SMG5Q9UPR3 1016 aaKnown RBP17.32■□□□□ 0.36
SND1-203ENST00000463020 CFAP47Q6ZTR5 3102 aa17.32■□□□□ 0.36
SND1-203ENST00000463020 CHD8Q9HCK8 2581 aa17.31■□□□□ 0.36
SND1-203ENST00000463020 BTBD18B2RXH4 712 aa17.31■□□□□ 0.36
SND1-203ENST00000463020 XYLBO75191 536 aa17.31■□□□□ 0.36
SND1-203ENST00000463020 TDGF1P13385 188 aa17.31■□□□□ 0.36
SND1-203ENST00000463020 ATXN1P54253 815 aaKnown RBP17.31■□□□□ 0.36
SND1-203ENST00000463020 MTAPQ13126 283 aa17.31■□□□□ 0.36
SND1-203ENST00000463020 GRM2Q14416 872 aa17.31■□□□□ 0.36
SND1-203ENST00000463020 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.31■□□□□ 0.36
SND1-203ENST00000463020 CATSPER3Q86XQ3 398 aa17.31■□□□□ 0.36
SND1-203ENST00000463020 PPP1R10Q96QC0 940 aaKnown RBP17.31■□□□□ 0.36
SND1-203ENST00000463020 NAP1L4Q99733 375 aaKnown RBP17.31■□□□□ 0.36
SND1-203ENST00000463020 PRMT8Q9NR22 394 aaPredicted RBP17.31■□□□□ 0.36
SND1-203ENST00000463020 NCDNQ9UBB6 729 aa17.31■□□□□ 0.36
SND1-203ENST00000463020 N4BP3O15049 544 aa17.3■□□□□ 0.36
SND1-203ENST00000463020 SPTLC1O15269 473 aa17.3■□□□□ 0.36
SND1-203ENST00000463020 NEMFO60524 1076 aa17.3■□□□□ 0.36
SND1-203ENST00000463020 CDKL5O76039 1030 aa17.3■□□□□ 0.36
SND1-203ENST00000463020 PRKCBP05771 671 aa17.3■□□□□ 0.36
SND1-203ENST00000463020 RHOP08100 348 aa17.3■□□□□ 0.36
SND1-203ENST00000463020 POU2F2P09086 479 aa17.3■□□□□ 0.36
SND1-203ENST00000463020 CCR2P41597 374 aa17.3■□□□□ 0.36
SND1-203ENST00000463020 PRPF4BQ13523 1007 aaKnown RBP17.3■□□□□ 0.36
SND1-203ENST00000463020 NT5DC1Q5TFE4 455 aa17.3■□□□□ 0.36
SND1-203ENST00000463020 CEP120Q8N960 986 aa17.3■□□□□ 0.36
SND1-203ENST00000463020 PRIMPOLQ96LW4 560 aa17.3■□□□□ 0.36
SND1-203ENST00000463020 CCDC43Q96MW1 224 aaKnown RBP17.3■□□□□ 0.36
SND1-203ENST00000463020 OSBPL6Q9BZF3 934 aa17.3■□□□□ 0.36
SND1-203ENST00000463020 EPC1Q9H2F5 836 aa17.3■□□□□ 0.36
SND1-203ENST00000463020 MRPS23Q9Y3D9 190 aaKnown RBP17.3■□□□□ 0.36
SND1-203ENST00000463020 PCDHGA2Q9Y5H1 932 aa17.3■□□□□ 0.36
SND1-203ENST00000463020 MEFVO15553 781 aaPredicted RBP17.29■□□□□ 0.36
SND1-203ENST00000463020 JAK2O60674 1132 aa17.29■□□□□ 0.36
SND1-203ENST00000463020 ATP2B1P20020 1258 aa17.29■□□□□ 0.36
SND1-203ENST00000463020 HOXC13P31276 330 aa17.29■□□□□ 0.36
SND1-203ENST00000463020 LPAL2Q16609 132 aa17.29■□□□□ 0.36
SND1-203ENST00000463020 ECM1Q16610 540 aa17.29■□□□□ 0.36
SND1-203ENST00000463020 UPP1Q16831 310 aa17.29■□□□□ 0.36
SND1-203ENST00000463020 C8orf34Q49A92 452 aa17.29■□□□□ 0.36
SND1-203ENST00000463020 PRSS36Q5K4E3 855 aa17.29■□□□□ 0.36
SND1-203ENST00000463020 ZBTB41Q5SVQ8 909 aa17.29■□□□□ 0.36
SND1-203ENST00000463020 ZSCAN32Q9NX65 697 aa17.29■□□□□ 0.36
SND1-203ENST00000463020 KCNH3Q9ULD8 1083 aa17.29■□□□□ 0.36
SND1-203ENST00000463020 WDR27A2RRH5 827 aa17.28■□□□□ 0.36
SND1-203ENST00000463020 DCDC2BA2VCK2 349 aa17.28■□□□□ 0.36
SND1-203ENST00000463020 TMEM189-UBE2V1I3L0A0 370 aa17.28■□□□□ 0.36
SND1-203ENST00000463020 ACKR2O00590 384 aa17.28■□□□□ 0.36
SND1-203ENST00000463020 ECI2O75521 394 aa17.28■□□□□ 0.36
SND1-203ENST00000463020 B3GAT3O94766 335 aa17.28■□□□□ 0.36
SND1-203ENST00000463020 SEC24AO95486 1093 aa17.28■□□□□ 0.36
SND1-203ENST00000463020 XBP1P17861 261 aa17.28■□□□□ 0.36
SND1-203ENST00000463020 ROR1Q01973 937 aa17.28■□□□□ 0.36
SND1-203ENST00000463020 ST3GAL1Q11201 340 aa17.28■□□□□ 0.36
SND1-203ENST00000463020 FAM78AQ5JUQ0 283 aa17.28■□□□□ 0.36
SND1-203ENST00000463020 ZBTB8OSQ8IWT0 167 aa17.28■□□□□ 0.36
SND1-203ENST00000463020 ATRIPQ8WXE1 791 aa17.28■□□□□ 0.36
SND1-203ENST00000463020 ZSWIM3Q96MP5 696 aa17.28■□□□□ 0.36
SND1-203ENST00000463020 PFKPQ01813 784 aa17.27■□□□□ 0.36
SND1-203ENST00000463020 ELAVL2Q12926 359 aaKnown RBP17.27■□□□□ 0.36
SND1-203ENST00000463020 ME3Q16798 604 aa17.27■□□□□ 0.36
SND1-203ENST00000463020 TMEM132AQ24JP5 1023 aa17.27■□□□□ 0.36
SND1-203ENST00000463020 UVSSAQ2YD98 709 aa17.27■□□□□ 0.36
SND1-203ENST00000463020 PADI6Q6TGC4 694 aa17.27■□□□□ 0.36
SND1-203ENST00000463020 DIS3L2Q8IYB7 885 aaKnown RBP17.27■□□□□ 0.36
SND1-203ENST00000463020 HS6ST3Q8IZP7 471 aa17.27■□□□□ 0.36
SND1-203ENST00000463020 ZMAT2Q96NC0 199 aaKnown RBP17.27■□□□□ 0.36
SND1-203ENST00000463020 NDRG2Q9UN36 371 aaKnown RBP17.27■□□□□ 0.36
SND1-203ENST00000463020 BACE2Q9Y5Z0 518 aa17.27■□□□□ 0.36
SND1-203ENST00000463020 TRIP11Q15643 1979 aa17.26■□□□□ 0.35
SND1-203ENST00000463020 USP24Q9UPU5 2620 aa17.26■□□□□ 0.35
SND1-203ENST00000463020 TBC1D4O60343 1298 aa17.26■□□□□ 0.35
SND1-203ENST00000463020 MOSPD3O75425 235 aa17.26■□□□□ 0.35
SND1-203ENST00000463020 XRCC6P12956 609 aaKnown RBP eCLIP17.26■□□□□ 0.35
SND1-203ENST00000463020 RPS9P46781 194 aaKnown RBP17.26■□□□□ 0.35
SND1-203ENST00000463020 DMWDQ09019 674 aa17.26■□□□□ 0.35
SND1-203ENST00000463020 MAPK6Q16659 721 aa17.26■□□□□ 0.35
SND1-203ENST00000463020 WDR44Q5JSH3 913 aa17.26■□□□□ 0.35
SND1-203ENST00000463020 NSUN7Q8NE18 718 aaKnown RBP17.26■□□□□ 0.35
SND1-203ENST00000463020 MCPH1Q8NEM0 835 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms