RNA–Protein interactions for RNA: ENST00000462844.5

SPIN1-202, Transcript of spindlin 1, humanhuman

TSL 2

Gene SPIN1, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-202ENST00000462844 ANKS3Q6ZW76 656 aa23.07■■□□□ 1.28
SPIN1-202ENST00000462844 CEP57Q86XR8 500 aa23.07■■□□□ 1.28
SPIN1-202ENST00000462844 HSCBQ8IWL3 235 aa23.07■■□□□ 1.28
SPIN1-202ENST00000462844 LNX1Q8TBB1 728 aaPredicted RBP23.07■■□□□ 1.28
SPIN1-202ENST00000462844 EPSTI1Q96J88 318 aa23.07■■□□□ 1.28
SPIN1-202ENST00000462844 ST6GALNAC4Q9H4F1 302 aa23.07■■□□□ 1.28
SPIN1-202ENST00000462844 SEL1LQ9UBV2 794 aa23.07■■□□□ 1.28
SPIN1-202ENST00000462844 SORCS3Q9UPU3 1222 aa23.07■■□□□ 1.28
SPIN1-202ENST00000462844 HNRNPDLO14979 420 aaKnown RBP23.06■■□□□ 1.28
SPIN1-202ENST00000462844 MARCKSP29966 332 aaPredicted RBP23.06■■□□□ 1.28
SPIN1-202ENST00000462844 MATR3P43243 847 aaKnown RBP eCLIP23.06■■□□□ 1.289e-7■■□□□ 13.9
SPIN1-202ENST00000462844 LIG4P49917 911 aa23.06■■□□□ 1.28
SPIN1-202ENST00000462844 CLCNKBP51801 687 aa23.06■■□□□ 1.28
SPIN1-202ENST00000462844 MTMR3Q13615 1198 aa23.06■■□□□ 1.28
SPIN1-202ENST00000462844 RRAGBQ5VZM2 374 aa23.06■■□□□ 1.28
SPIN1-202ENST00000462844 CCDC73Q6ZRK6 1079 aa23.06■■□□□ 1.28
SPIN1-202ENST00000462844 PALB2Q86YC2 1186 aa23.06■■□□□ 1.28
SPIN1-202ENST00000462844 KREMEN2Q8NCW0 462 aa23.06■■□□□ 1.28
SPIN1-202ENST00000462844 HASPINQ8TF76 798 aa23.06■■□□□ 1.28
SPIN1-202ENST00000462844 B3GALT6Q96L58 329 aa23.06■■□□□ 1.28
SPIN1-202ENST00000462844 CXCL16Q9H2A7 254 aa23.06■■□□□ 1.28
SPIN1-202ENST00000462844 CACNG4Q9UBN1 327 aa23.06■■□□□ 1.28
SPIN1-202ENST00000462844 C2CD4DB7Z1M9 353 aa23.05■■□□□ 1.28
SPIN1-202ENST00000462844 K7ENM7 598 aa23.05■■□□□ 1.28
SPIN1-202ENST00000462844 HSP90AA1P07900 732 aaKnown RBP23.05■■□□□ 1.28
SPIN1-202ENST00000462844 HNRNPA1P09651 372 aaKnown RBP eCLIP23.05■■□□□ 1.28
SPIN1-202ENST00000462844 WEE2P0C1S8 567 aa23.05■■□□□ 1.28
SPIN1-202ENST00000462844 NASPP49321 788 aaPredicted RBP23.05■■□□□ 1.28
SPIN1-202ENST00000462844 GTF2BQ00403 316 aa23.05■■□□□ 1.28
SPIN1-202ENST00000462844 CACNB1Q02641 598 aaPredicted RBP23.05■■□□□ 1.28
SPIN1-202ENST00000462844 HVCN1Q96D96 273 aa23.05■■□□□ 1.28
SPIN1-202ENST00000462844 ZBTB45Q96K62 511 aaPredicted RBP23.05■■□□□ 1.28
SPIN1-202ENST00000462844 ZNF396Q96N95 335 aaPredicted RBP23.05■■□□□ 1.28
SPIN1-202ENST00000462844 CLSTN3Q9BQT9 956 aa23.05■■□□□ 1.28
SPIN1-202ENST00000462844 WDR6Q9NNW5 1121 aaKnown RBP23.05■■□□□ 1.28
SPIN1-202ENST00000462844 BACE2Q9Y5Z0 518 aa23.05■■□□□ 1.28
SPIN1-202ENST00000462844 XPOTO43592 962 aaKnown RBP23.04■■□□□ 1.28
SPIN1-202ENST00000462844 ZMYND10O75800 440 aa23.04■■□□□ 1.28
SPIN1-202ENST00000462844 HOXA9P31269 272 aa23.04■■□□□ 1.28
SPIN1-202ENST00000462844 UVSSAQ2YD98 709 aa23.04■■□□□ 1.28
SPIN1-202ENST00000462844 PRSS55Q6UWB4 352 aaPredicted RBP23.04■■□□□ 1.28
SPIN1-202ENST00000462844 SV2BQ7L1I2 683 aa23.04■■□□□ 1.28
SPIN1-202ENST00000462844 CD302Q8IX05 232 aa23.04■■□□□ 1.28
SPIN1-202ENST00000462844 LRRC15Q8TF66 581 aa23.04■■□□□ 1.28
SPIN1-202ENST00000462844 SMG7Q92540 1137 aaKnown RBP23.04■■□□□ 1.28
SPIN1-202ENST00000462844 PRKD2Q9BZL6 878 aa23.04■■□□□ 1.28
SPIN1-202ENST00000462844 ZHX3Q9H4I2 956 aa23.04■■□□□ 1.28
SPIN1-202ENST00000462844 MTRRQ9UBK8 725 aa23.04■■□□□ 1.28
SPIN1-202ENST00000462844 CDH22Q9UJ99 828 aa23.04■■□□□ 1.28
SPIN1-202ENST00000462844 FBXW11Q9UKB1 542 aa23.04■■□□□ 1.28
SPIN1-202ENST00000462844 MYH11P35749 1972 aa23.03■■□□□ 1.28
SPIN1-202ENST00000462844 TMEM221A6NGB7 291 aa23.03■■□□□ 1.28
SPIN1-202ENST00000462844 M0R296 226 aa23.03■■□□□ 1.28
SPIN1-202ENST00000462844 PODXLO00592 558 aa23.03■■□□□ 1.28
SPIN1-202ENST00000462844 SYN3O14994 580 aa23.03■■□□□ 1.28
SPIN1-202ENST00000462844 OGTO15294 1046 aa23.03■■□□□ 1.28
SPIN1-202ENST00000462844 HARSP12081 509 aaKnown RBP23.03■■□□□ 1.28
SPIN1-202ENST00000462844 GAP43P17677 238 aa23.03■■□□□ 1.28
SPIN1-202ENST00000462844 POU5F1Q01860 360 aaKnown RBP23.03■■□□□ 1.28
SPIN1-202ENST00000462844 CEBPZQ03701 1054 aaKnown RBP23.03■■□□□ 1.28
SPIN1-202ENST00000462844 RAB33AQ14088 237 aa23.03■■□□□ 1.28
SPIN1-202ENST00000462844 SLC10A6Q3KNW5 377 aa23.03■■□□□ 1.28
SPIN1-202ENST00000462844 LIN9Q5TKA1 542 aa23.03■■□□□ 1.28
SPIN1-202ENST00000462844 SLFN12LQ6IEE8 588 aa23.03■■□□□ 1.28
SPIN1-202ENST00000462844 KANK3Q6NY19 840 aa23.03■■□□□ 1.28
SPIN1-202ENST00000462844 MAP4K3Q8IVH8 894 aa23.03■■□□□ 1.28
SPIN1-202ENST00000462844 ZMAT2Q96NC0 199 aaKnown RBP23.03■■□□□ 1.28
SPIN1-202ENST00000462844 USP28Q96RU2 1077 aa23.03■■□□□ 1.28
SPIN1-202ENST00000462844 PIDD1Q9HB75 910 aa23.03■■□□□ 1.28
SPIN1-202ENST00000462844 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.03■■□□□ 1.282e-7■■■□□ 16.8
SPIN1-202ENST00000462844 NUB1Q9Y5A7 615 aa23.03■■□□□ 1.28
SPIN1-202ENST00000462844 TTC26A0AVF1 554 aa23.02■■□□□ 1.28
SPIN1-202ENST00000462844 POU2F2P09086 479 aa23.02■■□□□ 1.28
SPIN1-202ENST00000462844 RPL17P18621 184 aaKnown RBP23.02■■□□□ 1.28
SPIN1-202ENST00000462844 CYP3A5P20815 502 aa23.02■■□□□ 1.28
SPIN1-202ENST00000462844 PAX3P23760 479 aa23.02■■□□□ 1.28
SPIN1-202ENST00000462844 SOX4Q06945 474 aaPredicted RBP23.02■■□□□ 1.28
SPIN1-202ENST00000462844 FAM173BQ6P4H8 233 aa23.02■■□□□ 1.28
SPIN1-202ENST00000462844 HFE2Q6ZVN8 426 aa23.02■■□□□ 1.28
SPIN1-202ENST00000462844 USP49Q70CQ1 688 aa23.02■■□□□ 1.28
SPIN1-202ENST00000462844 NXPE3Q969Y0 559 aa23.02■■□□□ 1.28
SPIN1-202ENST00000462844 LRRC27Q9C0I9 530 aa23.02■■□□□ 1.28
SPIN1-202ENST00000462844 GOLGA2P5Q9HBQ8 144 aa23.02■■□□□ 1.28
SPIN1-202ENST00000462844 FOXD4L1Q9NU39 408 aa23.02■■□□□ 1.28
SPIN1-202ENST00000462844 CLUHO75153 1309 aa23.02■■□□□ 1.28
SPIN1-202ENST00000462844 C5orf42Q9H799 3197 aa23.01■■□□□ 1.27
SPIN1-202ENST00000462844 A0A0B4J269 797 aa23.01■■□□□ 1.27
SPIN1-202ENST00000462844 H7C4K7 107 aa23.01■■□□□ 1.27
SPIN1-202ENST00000462844 PPP6R2O75170 966 aa23.01■■□□□ 1.27
SPIN1-202ENST00000462844 SP100P23497 879 aaPredicted RBP23.01■■□□□ 1.27
SPIN1-202ENST00000462844 PPP2R3AQ06190 1150 aa23.01■■□□□ 1.27
SPIN1-202ENST00000462844 STK38Q15208 465 aa23.01■■□□□ 1.27
SPIN1-202ENST00000462844 SPECC1Q5M775 1068 aa23.01■■□□□ 1.27
SPIN1-202ENST00000462844 ATL3Q6DD88 541 aa23.01■■□□□ 1.27
SPIN1-202ENST00000462844 CD300LGQ6UXG3 332 aa23.01■■□□□ 1.27
SPIN1-202ENST00000462844 GLYCTKQ8IVS8 523 aa23.01■■□□□ 1.27
SPIN1-202ENST00000462844 LINC00301Q8NCQ3 95 aa23.01■■□□□ 1.27
SPIN1-202ENST00000462844 DDX12PQ92771 950 aa23.01■■□□□ 1.27
SPIN1-202ENST00000462844 PBXIP1Q96AQ6 731 aa23.01■■□□□ 1.27
SPIN1-202ENST00000462844 ZNF707Q96C28 371 aaPredicted RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms