RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 EPC2Q52LR7 807 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 CEP135Q66GS9 1140 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 JADE1Q6IE81 842 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 TTI2Q6NXR4 508 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 FOXR2Q6PJQ5 311 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 KCNT2Q6UVM3 1135 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 ARNTL2Q8WYA1 636 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 C18orf25Q96B23 403 aaPredicted RBP12.8□□□□□ -0.36
CPNE1-221ENST00000462352 MFSD14AQ96MC6 490 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 ZNF558Q96NG5 402 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 TSPAN18Q96SJ8 248 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 TMEM175Q9BSA9 504 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 TTYH1Q9H313 450 aaPredicted RBP12.8□□□□□ -0.36
CPNE1-221ENST00000462352 GOLGA2P5Q9HBQ8 144 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 PDE11AQ9HCR9 933 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 SLC38A7Q9NVC3 462 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 FRMD4BQ9Y2L6 1034 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 DERAQ9Y315 318 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 C2CD2Q9Y426 696 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 PCDHB12Q9Y5F1 795 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 KIAA1671Q9BY89 1806 aa12.8□□□□□ -0.36
CPNE1-221ENST00000462352 TDRD15B5MCY1 1934 aaKnown RBP12.8□□□□□ -0.36
CPNE1-221ENST00000462352 CASTOR2A6NHX0 329 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 NT5C1B-RDH14C9J2C7 533 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 C5orf67F2Z3F1 127 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 NRP1O14786 923 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 CETN3O15182 167 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 AKAP3O75969 853 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 ALDH2P05091 517 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 RB1P06400 928 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 NFICP08651 508 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 OR1G1P47890 313 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 FXR1P51114 621 aaKnown RBP eCLIP12.79□□□□□ -0.36
CPNE1-221ENST00000462352 FKBP3Q00688 224 aaKnown RBP12.79□□□□□ -0.36
CPNE1-221ENST00000462352 CYP24A1Q07973 514 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 TMEM132DQ14C87 1099 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 PSMD6Q15008 389 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 SURF1Q15526 300 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 ZNF697Q5TEC3 545 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 GPR153Q6NV75 609 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 ZC3H3Q8IXZ2 948 aaKnown RBP12.79□□□□□ -0.36
CPNE1-221ENST00000462352 EFCAB13Q8IY85 973 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 SLC39A11Q8N1S5 342 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 EEF2KMTQ96G04 330 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 DUSP9Q99956 384 aaKnown RBP12.79□□□□□ -0.36
CPNE1-221ENST00000462352 PAAF1Q9BRP4 392 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 PLVAPQ9BX97 442 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 CACNG4Q9UBN1 327 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 TUBGCP4Q9UGJ1 667 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 DACH1Q9UI36 760 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 RWDD2AQ9UIY3 292 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 UBQLN1Q9UMX0 589 aaKnown RBP12.79□□□□□ -0.36
CPNE1-221ENST00000462352 FAN1Q9Y2M0 1017 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 PRG3Q9Y2Y8 225 aaPredicted RBP12.79□□□□□ -0.36
CPNE1-221ENST00000462352 TRIP11Q15643 1979 aa12.79□□□□□ -0.36
CPNE1-221ENST00000462352 CARNS1A5YM72 827 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 EPOPA6NHQ4 379 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 MAPK13O15264 365 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 XPOTO43592 962 aaKnown RBP12.78□□□□□ -0.36
CPNE1-221ENST00000462352 LETM1O95202 739 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-221ENST00000462352 CYP3A5P20815 502 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 ERCC5P28715 1186 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-221ENST00000462352 PPM1AP35813 382 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 PSMC2P35998 433 aaKnown RBP12.78□□□□□ -0.36
CPNE1-221ENST00000462352 CLCNKBP51801 687 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 GUCY2FP51841 1108 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 TYRO3Q06418 890 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 STX1AQ16623 288 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 SPATA1Q5VX52 437 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 TMEM173Q86WV6 379 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-221ENST00000462352 NT5DC4Q86YG4 428 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 FAM186BQ8IYM0 893 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 TMEM130Q8N3G9 435 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 KLHL23Q8NBE8 558 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 FBXO22Q8NEZ5 403 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 BEST2Q8NFU1 509 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 PLEKHO2Q8TD55 490 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 RABGGTAQ92696 567 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 CCDC127Q96BQ5 260 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 UROC1Q96N76 676 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 MED15Q96RN5 788 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 FNBP1Q96RU3 617 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 MKNK1Q9BUB5 465 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 GZF1Q9H116 711 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-221ENST00000462352 ANO10Q9NW15 660 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 SPG21Q9NZD8 308 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 ANK1P16157 1881 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 PDCD11Q14690 1871 aaKnown RBP12.78□□□□□ -0.36
CPNE1-221ENST00000462352 NLRC5Q86WI3 1866 aa12.78□□□□□ -0.36
CPNE1-221ENST00000462352 SYCE3A1L190 88 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 F8W810 466 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 H3BNC9 293 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 PODXLO00592 558 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 SLC16A3O15427 465 aaKnown RBP12.77□□□□□ -0.37
CPNE1-221ENST00000462352 FGF18O76093 207 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 DLATP10515 647 aaKnown RBP12.77□□□□□ -0.37
CPNE1-221ENST00000462352 EPB41P11171 864 aaKnown RBP12.77□□□□□ -0.37
CPNE1-221ENST00000462352 TFAMQ00059 246 aaKnown RBP12.77□□□□□ -0.37
CPNE1-221ENST00000462352 GPM6BQ13491 265 aa12.77□□□□□ -0.37
CPNE1-221ENST00000462352 GRIN2CQ14957 1233 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms