RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 LHFPL2Q6ZUX7 228 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 SYDE1Q6ZW31 735 aaPredicted RBP6.07□□□□□ -1.44
COPS3-204ENST00000462236 FERMT3Q86UX7 667 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 FAM26EQ8N5C1 309 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 FOXRED1Q96CU9 486 aaPredicted RBP6.07□□□□□ -1.44
COPS3-204ENST00000462236 CEP89Q96ST8 783 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 SLC38A3Q99624 504 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 C11orf84Q9BUA3 381 aaPredicted RBP6.07□□□□□ -1.44
COPS3-204ENST00000462236 MXD3Q9BW11 206 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 BTBD2Q9BX70 525 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 ZDHHC5Q9C0B5 715 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 INCENPQ9NQS7 918 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 KCNG1Q9UIX4 513 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 NOC2LQ9Y3T9 749 aaKnown RBP6.07□□□□□ -1.44
COPS3-204ENST00000462236 IRAK3Q9Y616 596 aa6.07□□□□□ -1.44
COPS3-204ENST00000462236 PLXNB2O15031 1838 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 ZNF804BA4D1E1 1349 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 UBA6A0AVT1 1052 aaPredicted RBP6.06□□□□□ -1.44
COPS3-204ENST00000462236 NFIBO00712 420 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 SASH1O94885 1247 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 TSPAN15O95858 294 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 MC3RP41968 323 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 NCKAP1LP55160 1127 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 ITGA1P56199 1179 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 ROM1Q03395 351 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 AIMP1Q12904 312 aaKnown RBP6.06□□□□□ -1.44
COPS3-204ENST00000462236 SLC9C1Q4G0N8 1177 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 LIPIQ6XZB0 460 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 CILP2Q8IUL8 1156 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 C7orf31Q8N865 590 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 CLRN3Q8NCR9 226 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 MAML3Q96JK9 1138 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 GORASP1Q9BQQ3 440 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 SGPP1Q9BX95 441 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 DEFB129Q9H1M3 183 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 TSPYL4Q9UJ04 414 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 RNF114Q9Y508 228 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 PPP2R3BQ9Y5P8 575 aa6.06□□□□□ -1.44
COPS3-204ENST00000462236 RFXAPO00287 272 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 PRKD3O94806 890 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 MPIG6BO95866 241 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 PCCAP05165 728 aaPredicted RBP6.05□□□□□ -1.44
COPS3-204ENST00000462236 HOXB7P09629 217 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 ADAM9Q13443 819 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 PRKG1Q13976 671 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 STILQ15468 1287 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 SKIDA1Q1XH10 827 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 BRDTQ58F21 947 aaPredicted RBP6.05□□□□□ -1.44
COPS3-204ENST00000462236 OTUD7BQ6GQQ9 843 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 ESPNLQ6ZVH7 1005 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 TMEFF1Q8IYR6 380 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 STAG1Q8WVM7 1258 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 RSAD2Q8WXG1 361 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 BRI3BPQ8WY22 251 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 AHCYL2Q96HN2 611 aaKnown RBP6.05□□□□□ -1.44
COPS3-204ENST00000462236 ACAP3Q96P50 834 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 COA1Q9GZY4 146 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 KCNK12Q9HB15 430 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 CHPF2Q9P2E5 772 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 ARHGAP20Q9P2F6 1191 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 BRWD1Q9NSI6 2320 aa6.05□□□□□ -1.44
COPS3-204ENST00000462236 DDX60LQ5H9U9 1706 aaKnown RBP6.05□□□□□ -1.44
COPS3-204ENST00000462236 AOX1Q06278 1338 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 COL2A1P02458 1487 aaPredicted RBP6.04□□□□□ -1.44
COPS3-204ENST00000462236 TCAF2A6NFQ2 919 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 CHL1O00533 1208 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 PRLP01236 227 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 CTGFP29279 349 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 CCT4P50991 539 aaKnown RBP6.04□□□□□ -1.44
COPS3-204ENST00000462236 BCAR1P56945 870 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 MOGSQ13724 837 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 KRT24Q2M2I5 525 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 SLC4A8Q2Y0W8 1093 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 CCDC152Q4G0S7 254 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 ZNF385BQ569K4 471 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 SYDE2Q5VT97 1194 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 TMC5Q6UXY8 1006 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 KANSL1Q7Z3B3 1105 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 FAM129CQ86XR2 697 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 CERS5Q8N5B7 392 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 CNTD1Q8N815 330 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 WDR48Q8TAF3 677 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 ARHGAP39Q9C0H5 1083 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 METTL14Q9HCE5 456 aaKnown RBP6.04□□□□□ -1.44
COPS3-204ENST00000462236 ZCCHC17Q9NP64 241 aaKnown RBP6.04□□□□□ -1.44
COPS3-204ENST00000462236 SLC39A2Q9NP94 309 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 CD320Q9NPF0 282 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 FBXO10Q9UK96 956 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 WASF3Q9UPY6 502 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 PCDHAC2Q9Y5I4 1007 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 PMF1-BGLAPU3KQ54 211 aa6.04□□□□□ -1.44
COPS3-204ENST00000462236 ADGRA2Q96PE1 1338 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 KDM1AO60341 852 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 TLR2O60603 784 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 FBXO21O94952 628 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 GJB1P08034 283 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 APEX1P27695 318 aaKnown RBP6.03□□□□□ -1.44
COPS3-204ENST00000462236 THBS2P35442 1172 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 PRMT2P55345 433 aa6.03□□□□□ -1.44
COPS3-204ENST00000462236 ERVK-21P61565 698 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms