RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 MANSC1Q9H8J5 431 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 TYW1Q9NV66 732 aaKnown RBP4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 GPRC5BQ9NZH0 403 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 TRPM5Q9NZQ8 1165 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 POGKQ9P215 609 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 CLCA2Q9UQC9 943 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 REXO2Q9Y3B8 237 aaKnown RBP4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 MYBBP1AQ9BQG0 1328 aaKnown RBP4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 MROH2BQ7Z745 1585 aa4.87□□□□□ -1.63
SSX2IP-204ENST00000459708 ITGB1P05556 798 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 PDGFRBP09619 1106 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 NCLP19338 710 aaKnown RBP4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 SLC6A2P23975 617 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 CCND1P24385 295 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 MGAT1P26572 445 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 RECQLP46063 649 aaPredicted RBP4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 ADKP55263 362 aaKnown RBP4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 CDC42EP1Q00587 391 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 PDCD4Q53EL6 469 aaKnown RBP4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 TMEM240Q5SV17 173 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 FAM102AQ5T9C2 384 aaPredicted RBP4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 METRNLQ641Q3 311 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 OTUD7BQ6GQQ9 843 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 ZNF529Q6P280 563 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 SEM1Q6ZVN7 128 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 UBE3BQ7Z3V4 1068 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 GDF7Q7Z4P5 450 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 DRC7Q8IY82 874 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 IFI44Q8TCB0 444 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 CYFIP2Q96F07 1278 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 TMX3Q96JJ7 454 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 NRDE2Q9H7Z3 1164 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 MMRN2Q9H8L6 949 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 TDP1Q9NUW8 608 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 FBXO34Q9NWN3 711 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 C11orf21Q9P2W6 132 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 LUC7L2Q9Y383 392 aaKnown RBP4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 NCAPD3P42695 1498 aa4.86□□□□□ -1.63
SSX2IP-204ENST00000459708 DRGXA6NNA5 263 aa4.85□□□□□ -1.63
SSX2IP-204ENST00000459708 NCR1O76036 304 aa4.85□□□□□ -1.63
SSX2IP-204ENST00000459708 RECQL4O94761 1208 aa4.85□□□□□ -1.63
SSX2IP-204ENST00000459708 SNUPNO95149 360 aaKnown RBP4.85□□□□□ -1.63
SSX2IP-204ENST00000459708 TGFB2P61812 414 aa4.85□□□□□ -1.63
SSX2IP-204ENST00000459708 PLXDC1Q8IUK5 500 aa4.85□□□□□ -1.63
SSX2IP-204ENST00000459708 CLIP3Q96DZ5 547 aa4.85□□□□□ -1.63
SSX2IP-204ENST00000459708 HOOK2Q96ED9 719 aa4.85□□□□□ -1.63
SSX2IP-204ENST00000459708 FAM193BQ96PV7 902 aaPredicted RBP4.85□□□□□ -1.63
SSX2IP-204ENST00000459708 SLC46A2Q9BY10 475 aa4.85□□□□□ -1.63
SSX2IP-204ENST00000459708 SPEF1Q9Y4P9 236 aa4.85□□□□□ -1.63
SSX2IP-204ENST00000459708 EIF4G1Q04637 1599 aaKnown RBP4.85□□□□□ -1.63
SSX2IP-204ENST00000459708 TCRBV7S2A1N4TA0A589 114 aa4.84□□□□□ -1.63
SSX2IP-204ENST00000459708 TEX33O43247 280 aa4.84□□□□□ -1.63
SSX2IP-204ENST00000459708 ALDH1L1O75891 902 aa4.84□□□□□ -1.63
SSX2IP-204ENST00000459708 PEX11BO96011 259 aa4.84□□□□□ -1.63
SSX2IP-204ENST00000459708 SLC6A4P31645 630 aa4.84□□□□□ -1.63
SSX2IP-204ENST00000459708 ABHD18Q0P651 414 aa4.84□□□□□ -1.63
SSX2IP-204ENST00000459708 TTF1Q15361 905 aaPredicted RBP4.84□□□□□ -1.63
SSX2IP-204ENST00000459708 AGAP9Q5VTM2 703 aa4.84□□□□□ -1.63
SSX2IP-204ENST00000459708 LRRC55Q6ZSA7 311 aa4.84□□□□□ -1.63
SSX2IP-204ENST00000459708 RSPH3Q86UC2 560 aa4.84□□□□□ -1.63
SSX2IP-204ENST00000459708 CPA6Q8N4T0 437 aa4.84□□□□□ -1.63
SSX2IP-204ENST00000459708 MLST8Q9BVC4 326 aa4.84□□□□□ -1.63
SSX2IP-204ENST00000459708 C11orf54Q9H0W9 315 aaPredicted RBP4.84□□□□□ -1.63
SSX2IP-204ENST00000459708 AASDHPPTQ9NRN7 309 aa4.84□□□□□ -1.63
SSX2IP-204ENST00000459708 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.84□□□□□ -1.63
SSX2IP-204ENST00000459708 USP15Q9Y4E8 981 aaPredicted RBP4.84□□□□□ -1.63
SSX2IP-204ENST00000459708 PCDHB1Q9Y5F3 818 aa4.84□□□□□ -1.63
SSX2IP-204ENST00000459708 CDHR4A6H8M9 788 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 MARCH11A6NNE9 402 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 KIAA0391O15091 583 aaKnown RBP4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 SGTAO43765 313 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 LPXNO60711 386 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 PRSS23O95084 383 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 CD1AP06126 327 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 SBK3P0C264 359 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 FXR1P51114 621 aaKnown RBP eCLIP4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 INHBEP58166 350 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 ZNF280AP59817 542 aaPredicted RBP4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 CTXN1P60606 82 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 MCL1Q07820 350 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 SMN1Q16637 294 aaKnown RBP4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 DACT2Q5SW24 774 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 MED25Q71SY5 747 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 RHOUQ7L0Q8 258 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 CATIPQ7Z7H3 387 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 MIER2Q8N344 545 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 OR56A1Q8NGH5 318 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 NSUN6Q8TEA1 469 aaKnown RBP4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 MRGPRX4Q96LA9 322 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 DCLRE1CQ96SD1 692 aaKnown RBP4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 ZSWIM1Q9BR11 485 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 AKIP1Q9NQ31 210 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 KLHL11Q9NVR0 708 aa4.83□□□□□ -1.64
SSX2IP-204ENST00000459708 CCDC78A2IDD5 438 aa4.82□□□□□ -1.64
SSX2IP-204ENST00000459708 LRRC14BA6NHZ5 514 aa4.82□□□□□ -1.64
SSX2IP-204ENST00000459708 GRM6O15303 877 aa4.82□□□□□ -1.64
SSX2IP-204ENST00000459708 ABLIM3O94929 683 aa4.82□□□□□ -1.64
SSX2IP-204ENST00000459708 IL33O95760 270 aa4.82□□□□□ -1.64
SSX2IP-204ENST00000459708 POMCP01189 267 aa4.82□□□□□ -1.64
SSX2IP-204ENST00000459708 ADH4P08319 380 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms