RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
SSX2IP-204ENST00000459708 CHIC1Q5VXU3 224 aa22.04■■□□□ 1.12
SSX2IP-204ENST00000459708 SENP3Q9H4L4 574 aaPredicted RBP20.02■□□□□ 0.8
SSX2IP-204ENST00000459708 PHF23Q9BUL5 403 aaPredicted RBP19.72■□□□□ 0.75
SSX2IP-204ENST00000459708 FOXD1Q16676 465 aa18.68■□□□□ 0.58
SSX2IP-204ENST00000459708 MSH5O43196 834 aa17.56■□□□□ 0.4
SSX2IP-204ENST00000459708 PLPPR3Q6T4P5 718 aa17.52■□□□□ 0.4
SSX2IP-204ENST00000459708 POTEDQ86YR6 584 aa17.5■□□□□ 0.39
SSX2IP-204ENST00000459708 PIAS4Q8N2W9 510 aaPredicted RBP17.44■□□□□ 0.38
SSX2IP-204ENST00000459708 PPP6R1Q9UPN7 881 aa17.3■□□□□ 0.36
SSX2IP-204ENST00000459708 ADRA2BP18089 450 aa17.25■□□□□ 0.35
SSX2IP-204ENST00000459708 MAPK8IP2Q13387 824 aaPredicted RBP15.9■□□□□ 0.14
SSX2IP-204ENST00000459708 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
SSX2IP-204ENST00000459708 SCAF1Q9H7N4 1312 aaKnown RBP15.74■□□□□ 0.11
SSX2IP-204ENST00000459708 PPP4R3CPQ6ZMV5 832 aa15.33■□□□□ 0.04
SSX2IP-204ENST00000459708 DCAF8L1A6NGE4 600 aa15.26■□□□□ 0.03
SSX2IP-204ENST00000459708 CACNB1Q02641 598 aaPredicted RBP15.22■□□□□ 0.03
SSX2IP-204ENST00000459708 HOXD11P31277 338 aaPredicted RBP15.15■□□□□ 0.02
SSX2IP-204ENST00000459708 CNKSR2Q8WXI2 1034 aa15.08■□□□□ 0
SSX2IP-204ENST00000459708 RNF216Q9NWF9 866 aaPredicted RBP14.99□□□□□ -0.01
SSX2IP-204ENST00000459708 RNF39Q9H2S5 420 aa14.96□□□□□ -0.01
SSX2IP-204ENST00000459708 C1QBPQ07021 282 aaKnown RBP14.72□□□□□ -0.05
SSX2IP-204ENST00000459708 NCBP3Q53F19 620 aaKnown RBP14.67□□□□□ -0.06
SSX2IP-204ENST00000459708 DNAJC5BQ9UF47 199 aa14.63□□□□□ -0.07
SSX2IP-204ENST00000459708 NPM3O75607 178 aaKnown RBP14.48□□□□□ -0.09
SSX2IP-204ENST00000459708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.48□□□□□ -0.092e-6■□□□□ 8.3
SSX2IP-204ENST00000459708 KCNA4P22459 653 aa14.17□□□□□ -0.14
SSX2IP-204ENST00000459708 U3KPZ7 1027 aaPredicted RBP14.15□□□□□ -0.14
SSX2IP-204ENST00000459708 SPINK5Q9NQ38 1064 aaPredicted RBP14.02□□□□□ -0.17
SSX2IP-204ENST00000459708 CAPN15O75808 1086 aa14.01□□□□□ -0.17
SSX2IP-204ENST00000459708 DSG3P32926 999 aa13.95□□□□□ -0.18
SSX2IP-204ENST00000459708 SLC4A2P04920 1241 aa13.87□□□□□ -0.19
SSX2IP-204ENST00000459708 TRHP20396 242 aaPredicted RBP13.74□□□□□ -0.21
SSX2IP-204ENST00000459708 APLP2Q06481 763 aa13.72□□□□□ -0.21
SSX2IP-204ENST00000459708 ZNF219Q9P2Y4 722 aaPredicted RBP13.69□□□□□ -0.22
SSX2IP-204ENST00000459708 ABCB7O75027 752 aa13.68□□□□□ -0.22
SSX2IP-204ENST00000459708 POTEHQ6S545 545 aa13.68□□□□□ -0.22
SSX2IP-204ENST00000459708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.65□□□□□ -0.22
SSX2IP-204ENST00000459708 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
SSX2IP-204ENST00000459708 SAMD1Q6SPF0 538 aaPredicted RBP13.57□□□□□ -0.24
SSX2IP-204ENST00000459708 SLC4A1APQ9BWU0 796 aaKnown RBP13.46□□□□□ -0.25
SSX2IP-204ENST00000459708 MYCNP04198 464 aaPredicted RBP13.4□□□□□ -0.26
SSX2IP-204ENST00000459708 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
SSX2IP-204ENST00000459708 POLA2Q14181 598 aa13.29□□□□□ -0.28
SSX2IP-204ENST00000459708 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
SSX2IP-204ENST00000459708 CHRDL2Q6WN34 429 aa13.12□□□□□ -0.31
SSX2IP-204ENST00000459708 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
SSX2IP-204ENST00000459708 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
SSX2IP-204ENST00000459708 ZBTB22O15209 634 aa13.08□□□□□ -0.32
SSX2IP-204ENST00000459708 ZBTB12Q9Y330 459 aaPredicted RBP13.01□□□□□ -0.33
SSX2IP-204ENST00000459708 AKT1S1Q96B36 256 aa12.96□□□□□ -0.33
SSX2IP-204ENST00000459708 CSRNP3Q8WYN3 585 aa12.93□□□□□ -0.34
SSX2IP-204ENST00000459708 OSCARQ8IYS5 282 aa12.92□□□□□ -0.34
SSX2IP-204ENST00000459708 REM2Q8IYK8 340 aaPredicted RBP12.84□□□□□ -0.35
SSX2IP-204ENST00000459708 PIP4P2Q8N4L2 257 aa12.76□□□□□ -0.37
SSX2IP-204ENST00000459708 PITPNM1O00562 1244 aa12.73□□□□□ -0.37
SSX2IP-204ENST00000459708 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
SSX2IP-204ENST00000459708 SP7Q8TDD2 431 aaPredicted RBP12.72□□□□□ -0.37
SSX2IP-204ENST00000459708 FXR2P51116 673 aaKnown RBP eCLIP12.62□□□□□ -0.39
SSX2IP-204ENST00000459708 FBLN2P98095 1184 aa12.61□□□□□ -0.39
SSX2IP-204ENST00000459708 SPDYE2BA6NHP3 402 aa12.59□□□□□ -0.39
SSX2IP-204ENST00000459708 HAX1O00165 279 aa12.59□□□□□ -0.39
SSX2IP-204ENST00000459708 SPDYE6P0CI01 402 aa12.59□□□□□ -0.39
SSX2IP-204ENST00000459708 SPDYE2Q495Y8 402 aa12.59□□□□□ -0.39
SSX2IP-204ENST00000459708 MKRN4PQ13434 485 aaPredicted RBP12.49□□□□□ -0.41
SSX2IP-204ENST00000459708 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
SSX2IP-204ENST00000459708 SPDYE1Q8NFV5 336 aaPredicted RBP12.43□□□□□ -0.42
SSX2IP-204ENST00000459708 EVX2Q03828 476 aa12.41□□□□□ -0.42
SSX2IP-204ENST00000459708 ZNF692Q9BU19 519 aaPredicted RBP12.41□□□□□ -0.42
SSX2IP-204ENST00000459708 PRKAR2AP13861 404 aaKnown RBP12.4□□□□□ -0.42
SSX2IP-204ENST00000459708 SSUH2Q9Y2M2 353 aa12.4□□□□□ -0.42
SSX2IP-204ENST00000459708 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
SSX2IP-204ENST00000459708 PABPN1Q86U42 306 aaKnown RBP eCLIP12.24□□□□□ -0.45
SSX2IP-204ENST00000459708 CHADLQ6NUI6 762 aa12.23□□□□□ -0.45
SSX2IP-204ENST00000459708 PRR29P0C7W0 189 aa12.18□□□□□ -0.46
SSX2IP-204ENST00000459708 GABBR2O75899 941 aa12.11□□□□□ -0.47
SSX2IP-204ENST00000459708 CD44P16070 742 aaKnown RBP12.01□□□□□ -0.49
SSX2IP-204ENST00000459708 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
SSX2IP-204ENST00000459708 LHX8Q68G74 356 aa11.93□□□□□ -0.5
SSX2IP-204ENST00000459708 POTEIP0CG38 1075 aa11.86□□□□□ -0.51
SSX2IP-204ENST00000459708 CREBZFQ9NS37 354 aa11.83□□□□□ -0.52
SSX2IP-204ENST00000459708 STAG3Q9UJ98 1225 aa11.82□□□□□ -0.52
SSX2IP-204ENST00000459708 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
SSX2IP-204ENST00000459708 CLCN6P51797 869 aa11.8□□□□□ -0.52
SSX2IP-204ENST00000459708 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
SSX2IP-204ENST00000459708 ZNF579Q8NAF0 562 aaKnown RBP11.79□□□□□ -0.52
SSX2IP-204ENST00000459708 DCBLD2Q96PD2 775 aa11.76□□□□□ -0.53
SSX2IP-204ENST00000459708 FKBP8Q14318 412 aa11.69□□□□□ -0.54
SSX2IP-204ENST00000459708 GALR2O43603 387 aaPredicted RBP11.68□□□□□ -0.54
SSX2IP-204ENST00000459708 PAK3O75914 559 aaPredicted RBP11.66□□□□□ -0.54
SSX2IP-204ENST00000459708 PHF12Q96QT6 1004 aa11.63□□□□□ -0.55
SSX2IP-204ENST00000459708 NPM1P06748 294 aaKnown RBP eCLIP11.6□□□□□ -0.55
SSX2IP-204ENST00000459708 MNX1P50219 401 aaPredicted RBP11.58□□□□□ -0.56
SSX2IP-204ENST00000459708 PROM2Q8N271 834 aa11.5□□□□□ -0.57
SSX2IP-204ENST00000459708 POTEB2H3BUK9 544 aa11.47□□□□□ -0.57
SSX2IP-204ENST00000459708 MS4A3Q96HJ5 214 aa11.47□□□□□ -0.57
SSX2IP-204ENST00000459708 PELP1Q8IZL8 1130 aaKnown RBP11.45□□□□□ -0.58
SSX2IP-204ENST00000459708 OTUD5Q96G74 571 aa11.45□□□□□ -0.58
SSX2IP-204ENST00000459708 TSPYL2Q9H2G4 693 aaPredicted RBP11.42□□□□□ -0.58
SSX2IP-204ENST00000459708 ASTLQ6HA08 431 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms