RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 HNRNPH3P31942 346 aaKnown RBP9.68□□□□□ -0.86
VPS50-207ENST00000458530 MCCD1P59942 119 aaPredicted RBP9.68□□□□□ -0.86
VPS50-207ENST00000458530 POLR2FP61218 127 aaKnown RBP9.68□□□□□ -0.86
VPS50-207ENST00000458530 NKX3-2P78367 333 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 KRT83P78385 493 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 POU5F1Q01860 360 aaKnown RBP9.68□□□□□ -0.86
VPS50-207ENST00000458530 PSMD6Q15008 389 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 KRT39Q6A163 491 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 NFRKBQ6P4R8 1299 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 SLC39A4Q6P5W5 647 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 PDXDC1Q6P996 788 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 MPZL3Q6UWV2 235 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 TSHZ1Q6ZSZ6 1077 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 RRAGAQ7L523 313 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 RNF180Q86T96 592 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 VPS36Q86VN1 386 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 C7orf31Q8N865 590 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 RDH13Q8NBN7 331 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 PCSK9Q8NBP7 692 aaKnown RBP9.68□□□□□ -0.86
VPS50-207ENST00000458530 LMBR1Q8WVP7 490 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 NLRP7Q8WX94 980 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 SAAL1Q96ER3 474 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 MFSD14AQ96MC6 490 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 CRACR2AQ9BSW2 395 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 TCHPQ9BT92 498 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 DEF6Q9H4E7 631 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 TMEM8AQ9HCN3 771 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 TMEM39AQ9NV64 488 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 PLAGL2Q9UPG8 496 aa9.68□□□□□ -0.86
VPS50-207ENST00000458530 BZW2Q9Y6E2 419 aaKnown RBP9.68□□□□□ -0.86
VPS50-207ENST00000458530 CNTNAP2Q9UHC6 1331 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 C17orf102A2RUQ5 167 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 MBLAC1A4D2B0 266 aaPredicted RBP9.67□□□□□ -0.86
VPS50-207ENST00000458530 GOLGA8IPA6NC78 632 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 GOLGA8JA6NMD2 632 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 GRXCR1A8MXD5 290 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 TISP43B9A030 160 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 M0QZ92 97 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 OGTO15294 1046 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 PQBP1O60828 265 aaKnown RBP9.67□□□□□ -0.86
VPS50-207ENST00000458530 ZC3H11AO75152 810 aaKnown RBP eCLIP9.67□□□□□ -0.86
VPS50-207ENST00000458530 PGK1P00558 417 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 ADRB2P07550 413 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 TRIM49P0CI25 452 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 TRIM49CP0CI26 452 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 CYP2C9P11712 490 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 UCHL3P15374 230 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 POU3F3P20264 500 aaPredicted RBP9.67□□□□□ -0.86
VPS50-207ENST00000458530 PON1P27169 355 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 CST5P28325 142 aaPredicted RBP9.67□□□□□ -0.86
VPS50-207ENST00000458530 KLK7P49862 253 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 MBTD1Q05BQ5 628 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 MCL1Q07820 350 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 GOLGA8FQ08AF8 430 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 GOLGA8DPQ0D2H9 430 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 KCNMA1Q12791 1236 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 DRP2Q13474 957 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 SPA17Q15506 151 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 PTPN14Q15678 1187 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 ASIC2Q16515 512 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 ZNF568Q3ZCX4 644 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 GNASQ5JWF2 1037 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 ATF7IP2Q5U623 682 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 KLHDC7AQ5VTJ3 777 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 SMYD5Q6GMV2 418 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 TAF2Q6P1X5 1199 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 TRIM65Q6PJ69 517 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 RSPH3Q86UC2 560 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 CBWD2Q8IUF1 395 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 NME8Q8N427 588 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 PARD3BQ8TEW8 1205 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 WNT2BQ93097 391 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 ACO2Q99798 780 aaKnown RBP9.67□□□□□ -0.86
VPS50-207ENST00000458530 ADPGKQ9BRR6 497 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 FAM213AQ9BRX8 229 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 TARS2Q9BW92 718 aaKnown RBP9.67□□□□□ -0.86
VPS50-207ENST00000458530 GCOM2Q9BZD3 368 aaPredicted RBP9.67□□□□□ -0.86
VPS50-207ENST00000458530 INTS2Q9H0H0 1204 aaKnown RBP9.67□□□□□ -0.86
VPS50-207ENST00000458530 GANQ9H2C0 597 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 IKZF4Q9H2S9 585 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 FZD8Q9H461 694 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 RRAGDQ9NQL2 400 aaPredicted RBP9.67□□□□□ -0.86
VPS50-207ENST00000458530 AGPAT5Q9NUQ2 364 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 RBAKQ9NYW8 714 aaPredicted RBP9.67□□□□□ -0.86
VPS50-207ENST00000458530 APEX2Q9UBZ4 518 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 RABGEF1Q9UJ41 708 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 TNFSF13BQ9Y275 285 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 PPP2R2CQ9Y2T4 447 aa9.67□□□□□ -0.86
VPS50-207ENST00000458530 PDCD11Q14690 1871 aaKnown RBP9.67□□□□□ -0.86
VPS50-207ENST00000458530 SSU72P8A0A1W2PR75 194 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 MOXD2PA6NHM9 499 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 SOWAHDA6NJG2 315 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 LRRC53A6NM62 1247 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 DCDC2CA8MYV0 355 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 CABYRO75952 493 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 IL18RAPO95256 599 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 SERPING1P05155 500 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 MCF2P10911 925 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 FERP16591 822 aa9.66□□□□□ -0.86
VPS50-207ENST00000458530 STAT1P42224 750 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms