RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 PLXNA3P51805 1871 aa19.53■□□□□ 0.72
MSH6-207ENST00000456246 TECTAO75443 2155 aa19.53■□□□□ 0.72
MSH6-207ENST00000456246 MTCL1Q9Y4B5 1905 aaKnown RBP19.53■□□□□ 0.72
MSH6-207ENST00000456246 C2CD4DB7Z1M9 353 aa19.52■□□□□ 0.72
MSH6-207ENST00000456246 K7ENM7 598 aa19.52■□□□□ 0.72
MSH6-207ENST00000456246 TGM5O43548 720 aa19.52■□□□□ 0.72
MSH6-207ENST00000456246 TRAK2O60296 914 aa19.52■□□□□ 0.72
MSH6-207ENST00000456246 PIGRP01833 764 aa19.52■□□□□ 0.72
MSH6-207ENST00000456246 FGFR3P22607 806 aa19.52■□□□□ 0.72
MSH6-207ENST00000456246 RPL9P32969 192 aaKnown RBP19.52■□□□□ 0.72
MSH6-207ENST00000456246 MATR3P43243 847 aaKnown RBP eCLIP19.52■□□□□ 0.72
MSH6-207ENST00000456246 LIG4P49917 911 aa19.52■□□□□ 0.72
MSH6-207ENST00000456246 CLCNKBP51801 687 aa19.52■□□□□ 0.72
MSH6-207ENST00000456246 SIGLEC14Q08ET2 396 aa19.52■□□□□ 0.72
MSH6-207ENST00000456246 SLC39A14Q15043 492 aa19.52■□□□□ 0.72
MSH6-207ENST00000456246 LILRA6Q6PI73 481 aa19.52■□□□□ 0.72
MSH6-207ENST00000456246 BMP8AQ7Z5Y6 402 aa19.52■□□□□ 0.72
MSH6-207ENST00000456246 LNX1Q8TBB1 728 aaPredicted RBP19.52■□□□□ 0.72
MSH6-207ENST00000456246 LRRC15Q8TF66 581 aa19.52■□□□□ 0.72
MSH6-207ENST00000456246 EPSTI1Q96J88 318 aa19.52■□□□□ 0.72
MSH6-207ENST00000456246 CCDC195A0A1B0GUA6 201 aa19.51■□□□□ 0.71
MSH6-207ENST00000456246 HNRNPDLO14979 420 aaKnown RBP19.51■□□□□ 0.71
MSH6-207ENST00000456246 CLTAP09496 248 aa19.51■□□□□ 0.71
MSH6-207ENST00000456246 SP100P23497 879 aaPredicted RBP19.51■□□□□ 0.71
MSH6-207ENST00000456246 MTMR3Q13615 1198 aa19.51■□□□□ 0.71
MSH6-207ENST00000456246 RRAGBQ5VZM2 374 aa19.51■□□□□ 0.71
MSH6-207ENST00000456246 KANK3Q6NY19 840 aa19.51■□□□□ 0.71
MSH6-207ENST00000456246 PRSS55Q6UWB4 352 aaPredicted RBP19.51■□□□□ 0.71
MSH6-207ENST00000456246 CCDC73Q6ZRK6 1079 aa19.51■□□□□ 0.71
MSH6-207ENST00000456246 ANKS3Q6ZW76 656 aa19.51■□□□□ 0.71
MSH6-207ENST00000456246 PALB2Q86YC2 1186 aa19.51■□□□□ 0.71
MSH6-207ENST00000456246 UBALD2Q8IYN6 164 aa19.51■□□□□ 0.71
MSH6-207ENST00000456246 KREMEN2Q8NCW0 462 aa19.51■□□□□ 0.71
MSH6-207ENST00000456246 ZBTB45Q96K62 511 aaPredicted RBP19.51■□□□□ 0.71
MSH6-207ENST00000456246 USP28Q96RU2 1077 aa19.51■□□□□ 0.71
MSH6-207ENST00000456246 TSPAN18Q96SJ8 248 aa19.51■□□□□ 0.71
MSH6-207ENST00000456246 KCNH6Q9H252 994 aa19.51■□□□□ 0.71
MSH6-207ENST00000456246 FOXD4L1Q9NU39 408 aa19.51■□□□□ 0.71
MSH6-207ENST00000456246 TBX20Q9UMR3 447 aa19.51■□□□□ 0.71
MSH6-207ENST00000456246 SORCS3Q9UPU3 1222 aa19.51■□□□□ 0.71
MSH6-207ENST00000456246 PODXLO00592 558 aa19.5■□□□□ 0.71
MSH6-207ENST00000456246 HSP90AA1P07900 732 aaKnown RBP19.5■□□□□ 0.71
MSH6-207ENST00000456246 NASPP49321 788 aaPredicted RBP19.5■□□□□ 0.71
MSH6-207ENST00000456246 CEBPZQ03701 1054 aaKnown RBP19.5■□□□□ 0.71
MSH6-207ENST00000456246 LIN9Q5TKA1 542 aa19.5■□□□□ 0.71
MSH6-207ENST00000456246 FAM173BQ6P4H8 233 aa19.5■□□□□ 0.71
MSH6-207ENST00000456246 RTL10Q7L3V2 364 aa19.5■□□□□ 0.71
MSH6-207ENST00000456246 CLSTN3Q9BQT9 956 aa19.5■□□□□ 0.71
MSH6-207ENST00000456246 ST6GALNAC4Q9H4F1 302 aa19.5■□□□□ 0.71
MSH6-207ENST00000456246 ZHX3Q9H4I2 956 aa19.5■□□□□ 0.71
MSH6-207ENST00000456246 GOLGA2P5Q9HBQ8 144 aa19.5■□□□□ 0.71
MSH6-207ENST00000456246 WDR6Q9NNW5 1121 aaKnown RBP19.5■□□□□ 0.71
MSH6-207ENST00000456246 MTRRQ9UBK8 725 aa19.5■□□□□ 0.71
MSH6-207ENST00000456246 SEL1LQ9UBV2 794 aa19.5■□□□□ 0.71
MSH6-207ENST00000456246 FBXW11Q9UKB1 542 aa19.5■□□□□ 0.71
MSH6-207ENST00000456246 BACE2Q9Y5Z0 518 aa19.5■□□□□ 0.71
MSH6-207ENST00000456246 C2orf16Q68DN1 1984 aa19.5■□□□□ 0.71
MSH6-207ENST00000456246 VWA8A3KMH1 1905 aa19.49■□□□□ 0.71
MSH6-207ENST00000456246 TRIOO75962 3097 aa19.49■□□□□ 0.71
MSH6-207ENST00000456246 TMEM221A6NGB7 291 aa19.49■□□□□ 0.71
MSH6-207ENST00000456246 M0R296 226 aa19.49■□□□□ 0.71
MSH6-207ENST00000456246 SYN3O14994 580 aa19.49■□□□□ 0.71
MSH6-207ENST00000456246 XPOTO43592 962 aaKnown RBP19.49■□□□□ 0.71
MSH6-207ENST00000456246 ZMYND10O75800 440 aa19.49■□□□□ 0.71
MSH6-207ENST00000456246 HNRNPA1P09651 372 aaKnown RBP eCLIP19.49■□□□□ 0.71
MSH6-207ENST00000456246 RPL17P18621 184 aaKnown RBP19.49■□□□□ 0.71
MSH6-207ENST00000456246 GTF2BQ00403 316 aa19.49■□□□□ 0.71
MSH6-207ENST00000456246 SOX4Q06945 474 aaPredicted RBP19.49■□□□□ 0.71
MSH6-207ENST00000456246 SLC10A6Q3KNW5 377 aa19.49■□□□□ 0.71
MSH6-207ENST00000456246 SPECC1Q5M775 1068 aa19.49■□□□□ 0.71
MSH6-207ENST00000456246 HFE2Q6ZVN8 426 aa19.49■□□□□ 0.71
MSH6-207ENST00000456246 USP49Q70CQ1 688 aa19.49■□□□□ 0.71
MSH6-207ENST00000456246 MAP4K3Q8IVH8 894 aa19.49■□□□□ 0.71
MSH6-207ENST00000456246 GLYCTKQ8IVS8 523 aa19.49■□□□□ 0.71
MSH6-207ENST00000456246 SMG7Q92540 1137 aaKnown RBP19.49■□□□□ 0.71
MSH6-207ENST00000456246 HVCN1Q96D96 273 aa19.49■□□□□ 0.71
MSH6-207ENST00000456246 ZNF396Q96N95 335 aaPredicted RBP19.49■□□□□ 0.71
MSH6-207ENST00000456246 ZMAT2Q96NC0 199 aaKnown RBP19.49■□□□□ 0.71
MSH6-207ENST00000456246 PRKD2Q9BZL6 878 aa19.49■□□□□ 0.71
MSH6-207ENST00000456246 PIDD1Q9HB75 910 aa19.49■□□□□ 0.71
MSH6-207ENST00000456246 NUB1Q9Y5A7 615 aa19.49■□□□□ 0.71
MSH6-207ENST00000456246 CLUHO75153 1309 aa19.49■□□□□ 0.71
MSH6-207ENST00000456246 PDCD11Q14690 1871 aaKnown RBP19.48■□□□□ 0.71
MSH6-207ENST00000456246 OGTO15294 1046 aa19.48■□□□□ 0.71
MSH6-207ENST00000456246 RFPL2O75678 378 aa19.48■□□□□ 0.71
MSH6-207ENST00000456246 HOXA9P31269 272 aa19.48■□□□□ 0.71
MSH6-207ENST00000456246 PPP2R3AQ06190 1150 aa19.48■□□□□ 0.71
MSH6-207ENST00000456246 RAB33AQ14088 237 aa19.48■□□□□ 0.71
MSH6-207ENST00000456246 STK38Q15208 465 aa19.48■□□□□ 0.71
MSH6-207ENST00000456246 SV2BQ7L1I2 683 aa19.48■□□□□ 0.71
MSH6-207ENST00000456246 C3orf58Q8NDZ4 430 aa19.48■□□□□ 0.71
MSH6-207ENST00000456246 CLIC6Q96NY7 704 aa19.48■□□□□ 0.71
MSH6-207ENST00000456246 FIZ1Q96SL8 496 aa19.48■□□□□ 0.71
MSH6-207ENST00000456246 RAPGEFL1Q9UHV5 662 aa19.48■□□□□ 0.71
MSH6-207ENST00000456246 TTC26A0AVF1 554 aa19.47■□□□□ 0.71
MSH6-207ENST00000456246 SPATA31D3P0C874 917 aa19.47■□□□□ 0.71
MSH6-207ENST00000456246 CXCL8P10145 99 aa19.47■□□□□ 0.71
MSH6-207ENST00000456246 GAP43P17677 238 aa19.47■□□□□ 0.71
MSH6-207ENST00000456246 STAT6P42226 847 aa19.47■□□□□ 0.71
MSH6-207ENST00000456246 SLFN12LQ6IEE8 588 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms