RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 MFSD14AQ96MC6 490 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 APOL6Q9BWW8 343 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 FAM117AQ9C073 453 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 NAT10Q9H0A0 1025 aaKnown RBP8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 DNAJC25Q9H1X3 360 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 PRO3102Q9H379 93 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 RPF1Q9H9Y2 349 aaKnown RBP8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 PLEKHA5Q9HAU0 1116 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 RNF19AQ9NV58 838 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 KLK14Q9P0G3 267 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 FRMD4BQ9Y2L6 1034 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 LTBP2Q14767 1821 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 CEP290O15078 2479 aa8.21□□□□□ -1.1
AC004540.1-206ENST00000448056 TTC26A0AVF1 554 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 ARL5CA6NH57 179 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 LACTBL1A8MY62 500 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 MAPK13O15264 365 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 INPPL1O15357 1258 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 HOXA2O43364 376 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 AKAP3O75969 853 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 RECQL4O94761 1208 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 GJB5O95377 273 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 FGFR1OPO95684 399 aaKnown RBP8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 CXCL8P10145 99 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 CD46P15529 392 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 PSMC2P35998 433 aaKnown RBP8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 CASP4P49662 377 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 AFF1P51825 1210 aaKnown RBP8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 ZNF445P59923 1031 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 SNRNP35Q16560 246 aaKnown RBP8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 NOMO2Q5JPE7 1267 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 CLLU1OSQ5K130 101 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 SPATA1Q5VX52 437 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 CEP135Q66GS9 1140 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 FAM117BQ6P1L5 589 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 GLB1LQ6UWU2 654 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 LRRC55Q6ZSA7 311 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 FILIP1Q7Z7B0 1213 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 HERC6Q8IVU3 1022 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 CD302Q8IX05 232 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 GSTCDQ8NEC7 633 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 HELQQ8TDG4 1101 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 NOC3LQ8WTT2 800 aaKnown RBP8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 ZNF689Q96CS4 500 aaPredicted RBP8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 ZFP42Q96MM3 310 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 CEP63Q96MT8 703 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 CASD1Q96PB1 797 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 SLC9A7Q96T83 725 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 GAD1Q99259 594 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 BPIFA3Q9BQP9 254 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 SRRTQ9BXP5 876 aaKnown RBP8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 CXCL16Q9H2A7 254 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 RSAD1Q9HA92 442 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 TOPORSQ9NS56 1045 aaPredicted RBP8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 MIOSQ9NXC5 875 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 RBAKQ9NYW8 714 aaPredicted RBP8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 KANSL3Q9P2N6 904 aa8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 RANBP2P49792 3224 aaKnown RBP8.2□□□□□ -1.1
AC004540.1-206ENST00000448056 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 SMIM28A0A1B0GU29 152 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 TBKBP1A7MCY6 615 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 GRXCR1A8MXD5 290 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 IL18RAPO95256 599 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 CAVIN2O95810 425 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 KCNE1P15382 129 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 MLH1P40692 756 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 ZNF165P49910 485 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 GATMP50440 423 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 MCCD1P59942 119 aaPredicted RBP8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 HTRA4P83105 476 aaPredicted RBP8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 CYP24A1Q07973 514 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 PSMD6Q15008 389 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 ZBTB6Q15916 424 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 FAM109BQ6ICB4 259 aaPredicted RBP8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 LRSAM1Q6UWE0 723 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 IRF2BP1Q8IU81 584 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 FAM186BQ8IYM0 893 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 TDHQ8IZJ6 230 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 ABI1Q8IZP0 508 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 ANKK1Q8NFD2 765 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 RSPH1Q8WYR4 309 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 WNT2BQ93097 391 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 BORCS6Q96GS4 357 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 SNX27Q96L92 541 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 ZMAT2Q96NC0 199 aaKnown RBP8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 TSPAN18Q96SJ8 248 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 RAD9AQ99638 391 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 ANP32EQ9BTT0 268 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 MKNK1Q9BUB5 465 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 TMEM117Q9H0C3 514 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 ASB7Q9H672 318 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 PDE11AQ9HCR9 933 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 CNTN3Q9P232 1028 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 INPP5FQ9Y2H2 1132 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 INSL6Q9Y581 213 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 TTC3P53804 2025 aa8.19□□□□□ -1.1
AC004540.1-206ENST00000448056 SMTNL1A8MU46 457 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 PTGESO14684 152 aa8.18□□□□□ -1.1
AC004540.1-206ENST00000448056 IKBKBO14920 756 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms