RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 DCTN3O75935 186 aa23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 KPNA2P52292 529 aaKnown RBP23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 SEZ6Q53EL9 994 aa23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 ATP6V1E2Q96A05 226 aa23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 ERP44Q9BS26 406 aa23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 CARD9Q9H257 536 aa23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 MID2Q9UJV3 735 aa23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 DYNC1LI2O43237 492 aaPredicted RBP23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 EXTL3O43909 919 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 CYP2C19P33261 490 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 MDH1P40925 334 aaKnown RBP23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 STX1BP61266 288 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 RAB44Q7Z6P3 723 aaPredicted RBP23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 DUSP9Q99956 384 aaKnown RBP23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 H2AFXP16104 143 aaPredicted RBP23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 SNRPFP62306 86 aaKnown RBP23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 RBP5P82980 135 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 CXCL9Q07325 125 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 DDR1Q08345 913 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 SYCP2LQ5T4T6 812 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 HVCN1Q96D96 273 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 DMGDHQ9UI17 866 aaKnown RBP23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 ZNF720Q7Z2F6 126 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 RDM1Q8NG50 284 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 INTUQ9ULD6 942 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 FRMD3A2A2Y4 597 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 P3H1Q32P28 736 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 APOBEC3HQ6NTF7 200 aaKnown RBP23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 TEX2Q8IWB9 1127 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 RCOR2Q8IZ40 523 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 THEM5Q8N1Q8 247 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 CHST13Q8NET6 341 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 OR6J1Q8NGC5 347 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 VPS39Q96JC1 886 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 TUBB6Q9BUF5 446 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 FUT8Q9BYC5 575 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 GTF3C4Q9UKN8 822 aa23.71■■□□□ 1.39
CTDSPL-206ENST00000443503 LCP1P13796 627 aa23.7■■□□□ 1.38
CTDSPL-206ENST00000443503 CDK17Q00537 523 aa23.7■■□□□ 1.38
CTDSPL-206ENST00000443503 ZNF560Q96MR9 790 aa23.7■■□□□ 1.38
CTDSPL-206ENST00000443503 SIK2Q9H0K1 926 aa23.7■■□□□ 1.38
CTDSPL-206ENST00000443503 BLOC1S4Q9NUP1 217 aa23.7■■□□□ 1.38
CTDSPL-206ENST00000443503 WDR35Q9P2L0 1181 aa23.7■■□□□ 1.38
CTDSPL-206ENST00000443503 TMEM62Q0P6H9 643 aa23.7■■□□□ 1.38
CTDSPL-206ENST00000443503 TMEM132DQ14C87 1099 aa23.7■■□□□ 1.38
CTDSPL-206ENST00000443503 Q4G0T1 1027 aa23.7■■□□□ 1.38
CTDSPL-206ENST00000443503 MUM1L1Q5H9M0 696 aa23.7■■□□□ 1.38
CTDSPL-206ENST00000443503 EFHC2Q5JST6 749 aa23.7■■□□□ 1.38
CTDSPL-206ENST00000443503 ATF7IP2Q5U623 682 aa23.7■■□□□ 1.38
CTDSPL-206ENST00000443503 ZFPM1Q8IX07 1006 aa23.7■■□□□ 1.38
CTDSPL-206ENST00000443503 C17orf75Q9HAS0 396 aa23.7■■□□□ 1.38
CTDSPL-206ENST00000443503 RGL2O15211 777 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 RARBP10826 455 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 STAT4Q14765 748 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 SLC13A1Q9BZW2 595 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 GRAP2O75791 330 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 NPTX2P47972 431 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 TSPY1Q01534 308 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 AP1B1Q10567 949 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 GPAT2Q6NUI2 795 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 DNAAF5Q86Y56 855 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 SLC16A10Q8TF71 515 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 ISCUQ9H1K1 167 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 HSPA4LO95757 839 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 ITIH2P19823 946 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 BMP6P22004 513 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 PMLP29590 882 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 GTF2H1P32780 548 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 EVX2Q03828 476 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 MTM1Q13496 603 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 LONRF1Q17RB8 773 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 TAF1BQ53T94 588 aaPredicted RBP23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 C2CD6Q53TS8 623 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 PAPD7Q5XG87 772 aaKnown RBP23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 SCFD2Q8WU76 684 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 TRIM56Q9BRZ2 755 aaKnown RBP23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 NIF3L1Q9GZT8 377 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 KCNQ5Q9NR82 932 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 BFARQ9NZS9 450 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 FAM86B1E9PN63 330 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 FAM86B2P0C5J1 330 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 IER5Q5VY09 327 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 KCNK18Q7Z418 384 aa23.69■■□□□ 1.38
CTDSPL-206ENST00000443503 GOLGA8CPA6NN73 597 aa23.68■■□□□ 1.38
CTDSPL-206ENST00000443503 ARHGEF6Q15052 776 aa23.68■■□□□ 1.38
CTDSPL-206ENST00000443503 KYNUQ16719 465 aa23.68■■□□□ 1.38
CTDSPL-206ENST00000443503 SH3RF1Q7Z6J0 888 aa23.68■■□□□ 1.38
CTDSPL-206ENST00000443503 CDKL3Q8IVW4 592 aaPredicted RBP23.68■■□□□ 1.38
CTDSPL-206ENST00000443503 TNIP3Q96KP6 325 aa23.68■■□□□ 1.38
CTDSPL-206ENST00000443503 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.68■■□□□ 1.38
CTDSPL-206ENST00000443503 PPP1R9AQ9ULJ8 1098 aa23.68■■□□□ 1.38
CTDSPL-206ENST00000443503 CFLARO15519 480 aa23.68■■□□□ 1.38
CTDSPL-206ENST00000443503 CDH16O75309 829 aa23.68■■□□□ 1.38
CTDSPL-206ENST00000443503 EPHB1P54762 984 aa23.68■■□□□ 1.38
CTDSPL-206ENST00000443503 EFCAB12Q6NXP0 572 aa23.68■■□□□ 1.38
CTDSPL-206ENST00000443503 ZNF571Q7Z3V5 609 aaPredicted RBP23.68■■□□□ 1.38
CTDSPL-206ENST00000443503 DBR1Q9UK59 544 aaKnown RBP23.68■■□□□ 1.38
CTDSPL-206ENST00000443503 BACE1P56817 501 aa23.68■■□□□ 1.38
CTDSPL-206ENST00000443503 MAP7Q14244 749 aa23.68■■□□□ 1.38
CTDSPL-206ENST00000443503 LRRC37BQ96QE4 947 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms