RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 METRNLQ641Q3 311 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 LRRC55Q6ZSA7 311 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 SEM1Q6ZVN7 128 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 MED25Q71SY5 747 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 UBE3BQ7Z3V4 1068 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 MRGPREQ86SM8 312 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 RSPH3Q86UC2 560 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 PLXDC1Q8IUK5 500 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 LARP4BQ92615 738 aaKnown RBP5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 LENG9Q96B70 501 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 COA7Q96BR5 231 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 TMX3Q96JJ7 454 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 AKIP1Q9NQ31 210 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 FZD1Q9UP38 647 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 SPEF1Q9Y4P9 236 aa5.79□□□□□ -1.48
AC003001.1-201ENST00000443247 RNASET2O00584 256 aaKnown RBP5.78□□□□□ -1.48
AC003001.1-201ENST00000443247 SPATA31D3P0C874 917 aa5.78□□□□□ -1.48
AC003001.1-201ENST00000443247 LAG3P18627 525 aa5.78□□□□□ -1.48
AC003001.1-201ENST00000443247 EDNRBP24530 442 aa5.78□□□□□ -1.48
AC003001.1-201ENST00000443247 CDC42EP1Q00587 391 aa5.78□□□□□ -1.48
AC003001.1-201ENST00000443247 IL10RAQ13651 578 aa5.78□□□□□ -1.48
AC003001.1-201ENST00000443247 UBXN2BQ14CS0 331 aa5.78□□□□□ -1.48
AC003001.1-201ENST00000443247 TIGD2Q4W5G0 525 aa5.78□□□□□ -1.48
AC003001.1-201ENST00000443247 SPATA31D4Q6ZUB0 917 aa5.78□□□□□ -1.48
AC003001.1-201ENST00000443247 RHOUQ7L0Q8 258 aa5.78□□□□□ -1.48
AC003001.1-201ENST00000443247 KAT5Q92993 513 aa5.78□□□□□ -1.48
AC003001.1-201ENST00000443247 MLST8Q9BVC4 326 aa5.78□□□□□ -1.48
AC003001.1-201ENST00000443247 FBXO34Q9NWN3 711 aa5.78□□□□□ -1.48
AC003001.1-201ENST00000443247 TCRBV7S2A1N4TA0A589 114 aa5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 KIAA0391O15091 583 aaKnown RBP5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 SNUPNO95149 360 aaKnown RBP5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 ZRANB2O95218 330 aaKnown RBP eCLIP5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 NDUFA10O95299 355 aa5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 ABHD16AO95870 558 aa5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 SLC6A2P23975 617 aa5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 RECQLP46063 649 aaPredicted RBP5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 ADKP55263 362 aaKnown RBP5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 EXOSC10Q01780 885 aaKnown RBP5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 CREMQ03060 361 aa5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 AGAP9Q5VTM2 703 aa5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 KCNV1Q6PIU1 500 aa5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 ZBTB46Q86UZ6 589 aa5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 RHOT2Q8IXI1 618 aa5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 DCBLD1Q8N8Z6 715 aa5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 OR56A1Q8NGH5 318 aa5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 PROKR1Q8TCW9 393 aa5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 CHMP4CQ96CF2 233 aa5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 C11orf54Q9H0W9 315 aaPredicted RBP5.77□□□□□ -1.49
AC003001.1-201ENST00000443247 CENPVL1A0A0U1RR11 272 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 GAGE12BA1L429 117 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 GAGE12HA6NDE8 117 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 LPXNO60711 386 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 PPFIA4O75335 1185 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 NEK2P51955 445 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 CTXN1P60606 82 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 TGFB2P61812 414 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 IGBP1P78318 339 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 ATP2B3Q16720 1220 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 BEAN1Q3B7T3 259 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 LY6G5CQ5SRR4 150 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 TSHZ3Q63HK5 1081 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 ZNF627Q7L945 461 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 MIER2Q8N344 545 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 AMER2Q8N7J2 671 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 CPEB3Q8NE35 698 aaKnown RBP5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 IFI44Q8TCB0 444 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 MYEOVQ96EZ4 313 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 ZSWIM1Q9BR11 485 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 REXO4Q9GZR2 422 aaKnown RBP5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 KLHL11Q9NVR0 708 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 ATP11BQ9Y2G3 1177 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 MAP3K2Q9Y2U5 619 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 LUC7L2Q9Y383 392 aaKnown RBP5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 FPGT-TNNI3KV9GXZ4 949 aa5.76□□□□□ -1.49
AC003001.1-201ENST00000443247 CDHR4A6H8M9 788 aa5.75□□□□□ -1.49
AC003001.1-201ENST00000443247 OVOL3O00110 214 aa5.75□□□□□ -1.49
AC003001.1-201ENST00000443247 SGTAO43765 313 aa5.75□□□□□ -1.49
AC003001.1-201ENST00000443247 PRSS23O95084 383 aa5.75□□□□□ -1.49
AC003001.1-201ENST00000443247 ALAS1P13196 640 aa5.75□□□□□ -1.49
AC003001.1-201ENST00000443247 NCLP19338 710 aaKnown RBP5.75□□□□□ -1.49
AC003001.1-201ENST00000443247 PPP4R3AQ6IN85 833 aa5.75□□□□□ -1.49
AC003001.1-201ENST00000443247 CMTR2Q8IYT2 770 aaKnown RBP5.75□□□□□ -1.49
AC003001.1-201ENST00000443247 FAM30AQ9NZY2 134 aa5.75□□□□□ -1.49
AC003001.1-201ENST00000443247 PCDHB1Q9Y5F3 818 aa5.75□□□□□ -1.49
AC003001.1-201ENST00000443247 HS3ST4Q9Y661 456 aa5.75□□□□□ -1.49
AC003001.1-201ENST00000443247 UNC119BA6NIH7 251 aa5.74□□□□□ -1.49
AC003001.1-201ENST00000443247 TMEM200CA6NKL6 621 aa5.74□□□□□ -1.49
AC003001.1-201ENST00000443247 GCSHP23434 173 aa5.74□□□□□ -1.49
AC003001.1-201ENST00000443247 ZNF280AP59817 542 aaPredicted RBP5.74□□□□□ -1.49
AC003001.1-201ENST00000443247 RAB39AQ14964 217 aa5.74□□□□□ -1.49
AC003001.1-201ENST00000443247 PTPAQ15257 358 aa5.74□□□□□ -1.49
AC003001.1-201ENST00000443247 TMEM240Q5SV17 173 aa5.74□□□□□ -1.49
AC003001.1-201ENST00000443247 DACT2Q5SW24 774 aa5.74□□□□□ -1.49
AC003001.1-201ENST00000443247 GADL1Q6ZQY3 521 aa5.74□□□□□ -1.49
AC003001.1-201ENST00000443247 MAPKAPK5Q8IW41 473 aa5.74□□□□□ -1.49
AC003001.1-201ENST00000443247 STAG1Q8WVM7 1258 aa5.74□□□□□ -1.49
AC003001.1-201ENST00000443247 CLPTM1LQ96KA5 538 aa5.74□□□□□ -1.49
AC003001.1-201ENST00000443247 MRGPRX4Q96LA9 322 aa5.74□□□□□ -1.49
AC003001.1-201ENST00000443247 GSTO2Q9H4Y5 243 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms