RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 SNCBQ16143 134 aa17.62■□□□□ 0.41
SEMA3B-207ENST00000441915 ZNF568Q3ZCX4 644 aa17.62■□□□□ 0.41
SEMA3B-207ENST00000441915 CCDC50Q8IVM0 306 aa17.62■□□□□ 0.41
SEMA3B-207ENST00000441915 SERPINB12Q96P63 405 aa17.62■□□□□ 0.41
SEMA3B-207ENST00000441915 ELAC2Q9BQ52 826 aaKnown RBP17.62■□□□□ 0.41
SEMA3B-207ENST00000441915 DDX23Q9BUQ8 820 aaKnown RBP17.62■□□□□ 0.41
SEMA3B-207ENST00000441915 WDR46O15213 610 aaKnown RBP17.62■□□□□ 0.41
SEMA3B-207ENST00000441915 C21orf2O43822 256 aa17.62■□□□□ 0.41
SEMA3B-207ENST00000441915 SYDE1Q6ZW31 735 aaPredicted RBP17.62■□□□□ 0.41
SEMA3B-207ENST00000441915 GRK7Q8WTQ7 553 aa17.62■□□□□ 0.41
SEMA3B-207ENST00000441915 SNF8Q96H20 258 aa17.62■□□□□ 0.41
SEMA3B-207ENST00000441915 AAASQ9NRG9 546 aa17.62■□□□□ 0.41
SEMA3B-207ENST00000441915 CHST7Q9NS84 486 aa17.62■□□□□ 0.41
SEMA3B-207ENST00000441915 ZNFX1Q9P2E3 1918 aaKnown RBP17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 TP73O15350 636 aa17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 GAS8O95995 478 aa17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 CCNE2O96020 404 aa17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 SLC1A1P43005 524 aa17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 CYP24A1Q07973 514 aa17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 ANO5Q75V66 913 aa17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 FAM83AQ86UY5 434 aa17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 ARHGEF2Q92974 986 aaKnown RBP17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 ELMO3Q96BJ8 720 aa17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 GMLQ99445 158 aa17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 NTPCRQ9BSD7 190 aaKnown RBP17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 ZBTB12Q9Y330 459 aaPredicted RBP17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 TESPA1A2RU30 521 aaPredicted RBP17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 HNRNPDLO14979 420 aaKnown RBP17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 UNGP13051 313 aaPredicted RBP17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 SF3A3Q12874 501 aaKnown RBP eCLIP17.61■□□□□ 0.416e-7■■□□□ 11.8
SEMA3B-207ENST00000441915 RHBDF2Q6PJF5 856 aa17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 MCOLN2Q8IZK6 566 aa17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 GPD1LQ8N335 351 aa17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 ZKSCAN4Q969J2 545 aaPredicted RBP17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 RMDN3Q96TC7 470 aa17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 MTFR1LQ9H019 292 aa17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 C17orf75Q9HAS0 396 aa17.61■□□□□ 0.41
SEMA3B-207ENST00000441915 ZC3H11AO75152 810 aaKnown RBP eCLIP17.6■□□□□ 0.415e-7■■■■□ 23.3
SEMA3B-207ENST00000441915 GSTA1P08263 222 aa17.6■□□□□ 0.41
SEMA3B-207ENST00000441915 OTUD6AQ7L8S5 288 aa17.6■□□□□ 0.41
SEMA3B-207ENST00000441915 SPIRE2Q8WWL2 714 aa17.6■□□□□ 0.41
SEMA3B-207ENST00000441915 ATG4AQ8WYN0 398 aa17.6■□□□□ 0.41
SEMA3B-207ENST00000441915 LPAR1Q92633 364 aa17.6■□□□□ 0.41
SEMA3B-207ENST00000441915 TRIM11Q96F44 468 aa17.6■□□□□ 0.41
SEMA3B-207ENST00000441915 PI4K2AQ9BTU6 479 aa17.6■□□□□ 0.41
SEMA3B-207ENST00000441915 SLC38A10Q9HBR0 1119 aa17.6■□□□□ 0.41
SEMA3B-207ENST00000441915 AVENQ9NQS1 362 aaPredicted RBP17.6■□□□□ 0.41
SEMA3B-207ENST00000441915 C1orf112Q9NSG2 853 aa17.6■□□□□ 0.41
SEMA3B-207ENST00000441915 MYBL1P10243 752 aa17.6■□□□□ 0.41
SEMA3B-207ENST00000441915 CAV1Q03135 178 aa17.6■□□□□ 0.41
SEMA3B-207ENST00000441915 PTK6Q13882 451 aa17.6■□□□□ 0.41
SEMA3B-207ENST00000441915 SLC39A4Q6P5W5 647 aa17.6■□□□□ 0.41
SEMA3B-207ENST00000441915 TRPM8Q7Z2W7 1104 aa17.6■□□□□ 0.41
SEMA3B-207ENST00000441915 SAMD3Q8N6K7 520 aa17.6■□□□□ 0.41
SEMA3B-207ENST00000441915 CEP170P1Q96L14 293 aa17.6■□□□□ 0.41
SEMA3B-207ENST00000441915 TTC4O95801 387 aa17.59■□□□□ 0.41
SEMA3B-207ENST00000441915 RRM1P23921 792 aa17.59■□□□□ 0.41
SEMA3B-207ENST00000441915 CHKAP35790 457 aa17.59■□□□□ 0.41
SEMA3B-207ENST00000441915 ZNF677Q86XU0 584 aa17.59■□□□□ 0.41
SEMA3B-207ENST00000441915 PDCD2LQ9BRP1 358 aa17.59■□□□□ 0.41
SEMA3B-207ENST00000441915 TRAIPQ9BWF2 469 aa17.59■□□□□ 0.41
SEMA3B-207ENST00000441915 CTDP1Q9Y5B0 961 aaPredicted RBP17.59■□□□□ 0.41
SEMA3B-207ENST00000441915 PCDHB2Q9Y5E7 798 aa17.59■□□□□ 0.41
SEMA3B-207ENST00000441915 PCDHA10Q9Y5I2 948 aa17.59■□□□□ 0.41
SEMA3B-207ENST00000441915 MROH7Q68CQ1 1323 aa17.59■□□□□ 0.41
SEMA3B-207ENST00000441915 ATF2P15336 505 aa17.59■□□□□ 0.41
SEMA3B-207ENST00000441915 NSFP46459 744 aaKnown RBP17.59■□□□□ 0.41
SEMA3B-207ENST00000441915 ITGA8P53708 1063 aa17.59■□□□□ 0.41
SEMA3B-207ENST00000441915 ATL2Q8NHH9 583 aa17.59■□□□□ 0.41
SEMA3B-207ENST00000441915 CPA5Q8WXQ8 436 aa17.59■□□□□ 0.41
SEMA3B-207ENST00000441915 BSNDQ8WZ55 320 aa17.59■□□□□ 0.41
SEMA3B-207ENST00000441915 TRIM7Q9C029 511 aa17.59■□□□□ 0.41
SEMA3B-207ENST00000441915 SLC12A4Q9UP95 1085 aa17.59■□□□□ 0.41
SEMA3B-207ENST00000441915 TMEM120BA0PK00 339 aa17.58■□□□□ 0.41
SEMA3B-207ENST00000441915 THAP12O43422 761 aa17.58■□□□□ 0.41
SEMA3B-207ENST00000441915 SNX3O60493 162 aa17.58■□□□□ 0.41
SEMA3B-207ENST00000441915 CALCAP01258 141 aa17.58■□□□□ 0.41
SEMA3B-207ENST00000441915 IVDP26440 423 aa17.58■□□□□ 0.41
SEMA3B-207ENST00000441915 LRRC14Q15048 493 aa17.58■□□□□ 0.41
SEMA3B-207ENST00000441915 TRIP13Q15645 432 aaPredicted RBP17.58■□□□□ 0.41
SEMA3B-207ENST00000441915 BRDTQ58F21 947 aaPredicted RBP17.58■□□□□ 0.41
SEMA3B-207ENST00000441915 ARHGEF16Q5VV41 709 aa17.58■□□□□ 0.41
SEMA3B-207ENST00000441915 RDM1Q8NG50 284 aa17.58■□□□□ 0.41
SEMA3B-207ENST00000441915 MGARPQ8TDB4 240 aa17.58■□□□□ 0.41
SEMA3B-207ENST00000441915 BICD1Q96G01 975 aa17.58■□□□□ 0.41
SEMA3B-207ENST00000441915 SCLT1Q96NL6 688 aa17.58■□□□□ 0.41
SEMA3B-207ENST00000441915 FAM213AQ9BRX8 229 aa17.58■□□□□ 0.41
SEMA3B-207ENST00000441915 MOV10L1Q9BXT6 1211 aaKnown RBP17.58■□□□□ 0.41
SEMA3B-207ENST00000441915 DCLK3Q9C098 648 aa17.58■□□□□ 0.41
SEMA3B-207ENST00000441915 PXMP2Q9NR77 195 aa17.58■□□□□ 0.41
SEMA3B-207ENST00000441915 PSME4Q14997 1843 aa17.58■□□□□ 0.41
SEMA3B-207ENST00000441915 GARTP22102 1010 aa17.58■□□□□ 0.4
SEMA3B-207ENST00000441915 ADCY8P40145 1251 aa17.58■□□□□ 0.4
SEMA3B-207ENST00000441915 NBPF9Q3BBW0 867 aa17.58■□□□□ 0.4
SEMA3B-207ENST00000441915 NLRX1Q86UT6 975 aa17.58■□□□□ 0.4
SEMA3B-207ENST00000441915 LARGE2Q8N3Y3 721 aa17.58■□□□□ 0.4
SEMA3B-207ENST00000441915 SOX10P56693 466 aa17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 BPIFB4P59827 614 aa17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 SATB1Q01826 763 aa17.57■□□□□ 0.4
SEMA3B-207ENST00000441915 MAP3K10Q02779 954 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms