RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 BRAPQ7Z569 592 aa18.42■□□□□ 0.54
COL16A1-204ENST00000440437 KCNN1Q92952 543 aa18.42■□□□□ 0.54
COL16A1-204ENST00000440437 ZBTB45Q96K62 511 aaPredicted RBP18.42■□□□□ 0.54
COL16A1-204ENST00000440437 ZMAT2Q96NC0 199 aaKnown RBP18.42■□□□□ 0.54
COL16A1-204ENST00000440437 MYADMQ96S97 322 aa18.42■□□□□ 0.54
COL16A1-204ENST00000440437 KCNK12Q9HB15 430 aa18.42■□□□□ 0.54
COL16A1-204ENST00000440437 CNTN3Q9P232 1028 aa18.42■□□□□ 0.54
COL16A1-204ENST00000440437 EPS15L1Q9UBC2 864 aa18.42■□□□□ 0.54
COL16A1-204ENST00000440437 MTRRQ9UBK8 725 aa18.42■□□□□ 0.54
COL16A1-204ENST00000440437 DUSP12Q9UNI6 340 aa18.42■□□□□ 0.54
COL16A1-204ENST00000440437 MYH15Q9Y2K3 1946 aa18.41■□□□□ 0.54
COL16A1-204ENST00000440437 NPHP3-ACAD11A0A0J9YXS1 232 aa18.41■□□□□ 0.54
COL16A1-204ENST00000440437 TOM1L1O75674 476 aa18.41■□□□□ 0.54
COL16A1-204ENST00000440437 KCNE1P15382 129 aa18.41■□□□□ 0.54
COL16A1-204ENST00000440437 SMTNP53814 917 aa18.41■□□□□ 0.54
COL16A1-204ENST00000440437 NCKAP1LP55160 1127 aa18.41■□□□□ 0.54
COL16A1-204ENST00000440437 CACNB1Q02641 598 aaPredicted RBP18.41■□□□□ 0.54
COL16A1-204ENST00000440437 GRIN1Q05586 938 aa18.41■□□□□ 0.54
COL16A1-204ENST00000440437 TCF15Q12870 199 aa18.41■□□□□ 0.54
COL16A1-204ENST00000440437 TDGQ13569 410 aa18.41■□□□□ 0.54
COL16A1-204ENST00000440437 DDX27Q96GQ7 796 aaKnown RBP18.41■□□□□ 0.54
COL16A1-204ENST00000440437 ACAP3Q96P50 834 aa18.41■□□□□ 0.54
COL16A1-204ENST00000440437 PIDD1Q9HB75 910 aa18.41■□□□□ 0.54
COL16A1-204ENST00000440437 BLOC1S4Q9NUP1 217 aa18.41■□□□□ 0.54
COL16A1-204ENST00000440437 IGSF9Q9P2J2 1179 aa18.41■□□□□ 0.54
COL16A1-204ENST00000440437 KCNG1Q9UIX4 513 aa18.41■□□□□ 0.54
COL16A1-204ENST00000440437 ODF2LQ9ULJ1 636 aa18.41■□□□□ 0.54
COL16A1-204ENST00000440437 ANK1P16157 1881 aa18.4■□□□□ 0.54
COL16A1-204ENST00000440437 BMP15O95972 392 aa18.4■□□□□ 0.54
COL16A1-204ENST00000440437 TKTP29401 623 aaKnown RBP18.4■□□□□ 0.54
COL16A1-204ENST00000440437 GBP2P32456 591 aaPredicted RBP18.4■□□□□ 0.54
COL16A1-204ENST00000440437 BRCC3P46736 316 aa18.4■□□□□ 0.54
COL16A1-204ENST00000440437 PTPN5P54829 565 aa18.4■□□□□ 0.54
COL16A1-204ENST00000440437 STRN3Q13033 797 aa18.4■□□□□ 0.54
COL16A1-204ENST00000440437 RAB33AQ14088 237 aa18.4■□□□□ 0.54
COL16A1-204ENST00000440437 NOLC1Q14978 699 aaKnown RBP eCLIP18.4■□□□□ 0.54
COL16A1-204ENST00000440437 ZPBP2Q6X784 338 aa18.4■□□□□ 0.54
COL16A1-204ENST00000440437 ALYREFQ86V81 257 aaKnown RBP18.4■□□□□ 0.54
COL16A1-204ENST00000440437 TCHPQ9BT92 498 aa18.4■□□□□ 0.54
COL16A1-204ENST00000440437 HAPLN2Q9GZV7 340 aa18.4■□□□□ 0.54
COL16A1-204ENST00000440437 SLC38A7Q9NVC3 462 aa18.4■□□□□ 0.54
COL16A1-204ENST00000440437 LARSQ9P2J5 1176 aaKnown RBP18.4■□□□□ 0.54
COL16A1-204ENST00000440437 ANKFY1Q9P2R3 1169 aa18.4■□□□□ 0.54
COL16A1-204ENST00000440437 PODXLO00592 558 aa18.39■□□□□ 0.53
COL16A1-204ENST00000440437 C8AP07357 584 aa18.39■□□□□ 0.53
COL16A1-204ENST00000440437 HNRNPA1P09651 372 aaKnown RBP eCLIP18.39■□□□□ 0.53
COL16A1-204ENST00000440437 HARSP12081 509 aaKnown RBP18.39■□□□□ 0.53
COL16A1-204ENST00000440437 HOXA9P31269 272 aa18.39■□□□□ 0.53
COL16A1-204ENST00000440437 LONP1P36776 959 aaKnown RBP18.39■□□□□ 0.53
COL16A1-204ENST00000440437 MCL1Q07820 350 aa18.39■□□□□ 0.53
COL16A1-204ENST00000440437 SF3A1Q15459 793 aaKnown RBP18.39■□□□□ 0.53
COL16A1-204ENST00000440437 LIN9Q5TKA1 542 aa18.39■□□□□ 0.53
COL16A1-204ENST00000440437 RSPO2Q6UXX9 243 aaPredicted RBP18.39■□□□□ 0.53
COL16A1-204ENST00000440437 CALML4Q96GE6 196 aa18.39■□□□□ 0.53
COL16A1-204ENST00000440437 REEP2Q9BRK0 252 aa18.39■□□□□ 0.53
COL16A1-204ENST00000440437 BACE2Q9Y5Z0 518 aa18.39■□□□□ 0.53
COL16A1-204ENST00000440437 PIEZO1Q92508 2521 aa18.38■□□□□ 0.53
COL16A1-204ENST00000440437 I3L4J1 428 aa18.38■□□□□ 0.53
COL16A1-204ENST00000440437 TRAPPC3O43617 180 aa18.38■□□□□ 0.53
COL16A1-204ENST00000440437 POU2F2P09086 479 aa18.38■□□□□ 0.53
COL16A1-204ENST00000440437 PLCG1P19174 1290 aa18.38■□□□□ 0.53
COL16A1-204ENST00000440437 OR1D2P34982 312 aa18.38■□□□□ 0.53
COL16A1-204ENST00000440437 UBA7P41226 1012 aa18.38■□□□□ 0.53
COL16A1-204ENST00000440437 MRE11P49959 708 aa18.38■□□□□ 0.53
COL16A1-204ENST00000440437 ZNF131P52739 623 aa18.38■□□□□ 0.53
COL16A1-204ENST00000440437 NUBP1P53384 320 aa18.38■□□□□ 0.53
COL16A1-204ENST00000440437 SLC10A6Q3KNW5 377 aa18.38■□□□□ 0.53
COL16A1-204ENST00000440437 SEZ6Q53EL9 994 aa18.38■□□□□ 0.53
COL16A1-204ENST00000440437 PPM1LQ5SGD2 360 aa18.38■□□□□ 0.53
COL16A1-204ENST00000440437 ANKS3Q6ZW76 656 aa18.38■□□□□ 0.53
COL16A1-204ENST00000440437 GET4Q7L5D6 327 aaPredicted RBP18.38■□□□□ 0.53
COL16A1-204ENST00000440437 GPBP1Q86WP2 473 aa18.38■□□□□ 0.53
COL16A1-204ENST00000440437 TMEM105Q8N8V8 129 aa18.38■□□□□ 0.53
COL16A1-204ENST00000440437 RSAD2Q8WXG1 361 aa18.38■□□□□ 0.53
COL16A1-204ENST00000440437 C18orf25Q96B23 403 aaPredicted RBP18.38■□□□□ 0.53
COL16A1-204ENST00000440437 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.38■□□□□ 0.53
COL16A1-204ENST00000440437 CDY1Q9Y6F8 540 aa18.38■□□□□ 0.53
COL16A1-204ENST00000440437 VPS37CA5D8V6 355 aaPredicted RBP18.37■□□□□ 0.53
COL16A1-204ENST00000440437 H0YCG3 227 aa18.37■□□□□ 0.53
COL16A1-204ENST00000440437 NARSO43776 548 aaKnown RBP18.37■□□□□ 0.53
COL16A1-204ENST00000440437 LAMP2P13473 410 aa18.37■□□□□ 0.53
COL16A1-204ENST00000440437 KARSQ15046 597 aaKnown RBP18.37■□□□□ 0.53
COL16A1-204ENST00000440437 CWF19L1Q69YN2 538 aaKnown RBP18.37■□□□□ 0.53
COL16A1-204ENST00000440437 HAUS6Q7Z4H7 955 aa18.37■□□□□ 0.53
COL16A1-204ENST00000440437 GRASPQ7Z6J2 395 aaPredicted RBP18.37■□□□□ 0.53
COL16A1-204ENST00000440437 SLC7A14Q8TBB6 771 aa18.37■□□□□ 0.53
COL16A1-204ENST00000440437 RAD54LQ92698 747 aa18.37■□□□□ 0.53
COL16A1-204ENST00000440437 NXPE3Q969Y0 559 aa18.37■□□□□ 0.53
COL16A1-204ENST00000440437 PHOX2BQ99453 314 aa18.37■□□□□ 0.53
COL16A1-204ENST00000440437 TSC2P49815 1807 aa18.37■□□□□ 0.53
COL16A1-204ENST00000440437 SYN3O14994 580 aa18.36■□□□□ 0.53
COL16A1-204ENST00000440437 CLDN3O15551 220 aa18.36■□□□□ 0.53
COL16A1-204ENST00000440437 RPL9P32969 192 aaKnown RBP18.36■□□□□ 0.53
COL16A1-204ENST00000440437 NTHL1P78549 312 aa18.36■□□□□ 0.53
COL16A1-204ENST00000440437 MCM6Q14566 821 aa18.36■□□□□ 0.53
COL16A1-204ENST00000440437 PTPAQ15257 358 aa18.36■□□□□ 0.53
COL16A1-204ENST00000440437 UVSSAQ2YD98 709 aa18.36■□□□□ 0.53
COL16A1-204ENST00000440437 AXDND1Q5T1B0 1012 aaPredicted RBP18.36■□□□□ 0.53
COL16A1-204ENST00000440437 ASTLQ6HA08 431 aaPredicted RBP18.36■□□□□ 0.53
COL16A1-204ENST00000440437 SLC8B1Q6J4K2 584 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms