RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 STRN3Q13033 797 aa22.24■■□□□ 1.15
NCKIPSD-206ENST00000439518 SF3A1Q15459 793 aaKnown RBP22.24■■□□□ 1.15
NCKIPSD-206ENST00000439518 ZPBP2Q6X784 338 aa22.24■■□□□ 1.15
NCKIPSD-206ENST00000439518 C3orf58Q8NDZ4 430 aa22.24■■□□□ 1.15
NCKIPSD-206ENST00000439518 CALML4Q96GE6 196 aa22.24■■□□□ 1.15
NCKIPSD-206ENST00000439518 ACAP3Q96P50 834 aa22.24■■□□□ 1.15
NCKIPSD-206ENST00000439518 BLOC1S4Q9NUP1 217 aa22.24■■□□□ 1.15
NCKIPSD-206ENST00000439518 SLC38A7Q9NVC3 462 aa22.24■■□□□ 1.15
NCKIPSD-206ENST00000439518 FBXW11Q9UKB1 542 aa22.24■■□□□ 1.15
NCKIPSD-206ENST00000439518 PDGFBP01127 241 aaPredicted RBP22.23■■□□□ 1.15
NCKIPSD-206ENST00000439518 PDCP20941 246 aa22.23■■□□□ 1.15
NCKIPSD-206ENST00000439518 NCKAP1LP55160 1127 aa22.23■■□□□ 1.15
NCKIPSD-206ENST00000439518 NHLH1Q02575 133 aa22.23■■□□□ 1.15
NCKIPSD-206ENST00000439518 CACNB1Q02641 598 aaPredicted RBP22.23■■□□□ 1.15
NCKIPSD-206ENST00000439518 STAMQ92783 540 aa22.23■■□□□ 1.15
NCKIPSD-206ENST00000439518 DDX27Q96GQ7 796 aaKnown RBP22.23■■□□□ 1.15
NCKIPSD-206ENST00000439518 CNTN3Q9P232 1028 aa22.23■■□□□ 1.15
NCKIPSD-206ENST00000439518 LARSQ9P2J5 1176 aaKnown RBP22.23■■□□□ 1.15
NCKIPSD-206ENST00000439518 MTRRQ9UBK8 725 aa22.23■■□□□ 1.15
NCKIPSD-206ENST00000439518 ODF2LQ9ULJ1 636 aa22.23■■□□□ 1.15
NCKIPSD-206ENST00000439518 MYH11P35749 1972 aa22.22■■□□□ 1.15
NCKIPSD-206ENST00000439518 VPS37CA5D8V6 355 aaPredicted RBP22.22■■□□□ 1.15
NCKIPSD-206ENST00000439518 VCPP55072 806 aaKnown RBP22.22■■□□□ 1.15
NCKIPSD-206ENST00000439518 MCL1Q07820 350 aa22.22■■□□□ 1.15
NCKIPSD-206ENST00000439518 RAB33AQ14088 237 aa22.22■■□□□ 1.15
NCKIPSD-206ENST00000439518 NOLC1Q14978 699 aaKnown RBP eCLIP22.22■■□□□ 1.15
NCKIPSD-206ENST00000439518 GPBP1Q86WP2 473 aa22.22■■□□□ 1.15
NCKIPSD-206ENST00000439518 PRSS33Q8NF86 280 aa22.22■■□□□ 1.15
NCKIPSD-206ENST00000439518 MYADMQ96S97 322 aa22.22■■□□□ 1.15
NCKIPSD-206ENST00000439518 REEP2Q9BRK0 252 aa22.22■■□□□ 1.15
NCKIPSD-206ENST00000439518 KCNK12Q9HB15 430 aa22.22■■□□□ 1.15
NCKIPSD-206ENST00000439518 PIDD1Q9HB75 910 aa22.22■■□□□ 1.15
NCKIPSD-206ENST00000439518 H0YCG3 227 aa22.21■■□□□ 1.15
NCKIPSD-206ENST00000439518 TRAPPC3O43617 180 aa22.21■■□□□ 1.15
NCKIPSD-206ENST00000439518 HARSP12081 509 aaKnown RBP22.21■■□□□ 1.15
NCKIPSD-206ENST00000439518 PLCG1P19174 1290 aa22.21■■□□□ 1.15
NCKIPSD-206ENST00000439518 AVPR2P30518 371 aa22.21■■□□□ 1.15
NCKIPSD-206ENST00000439518 OR1D2P34982 312 aa22.21■■□□□ 1.15
NCKIPSD-206ENST00000439518 ZNF131P52739 623 aa22.21■■□□□ 1.15
NCKIPSD-206ENST00000439518 TDGQ13569 410 aa22.21■■□□□ 1.15
NCKIPSD-206ENST00000439518 KARSQ15046 597 aaKnown RBP22.21■■□□□ 1.15
NCKIPSD-206ENST00000439518 SLC10A6Q3KNW5 377 aa22.21■■□□□ 1.15
NCKIPSD-206ENST00000439518 RSPO2Q6UXX9 243 aaPredicted RBP22.21■■□□□ 1.15
NCKIPSD-206ENST00000439518 HAUS6Q7Z4H7 955 aa22.21■■□□□ 1.15
NCKIPSD-206ENST00000439518 BACH2Q9BYV9 841 aa22.21■■□□□ 1.15
NCKIPSD-206ENST00000439518 IGSF9Q9P2J2 1179 aa22.21■■□□□ 1.15
NCKIPSD-206ENST00000439518 ANKFY1Q9P2R3 1169 aa22.21■■□□□ 1.15
NCKIPSD-206ENST00000439518 EPS15L1Q9UBC2 864 aa22.21■■□□□ 1.15
NCKIPSD-206ENST00000439518 BACE2Q9Y5Z0 518 aa22.21■■□□□ 1.15
NCKIPSD-206ENST00000439518 KMT2EQ8IZD2 1858 aa22.21■■□□□ 1.15
NCKIPSD-206ENST00000439518 DOCK8Q8NF50 2099 aa22.2■■□□□ 1.14
NCKIPSD-206ENST00000439518 I3L4J1 428 aa22.2■■□□□ 1.14
NCKIPSD-206ENST00000439518 CLDN3O15551 220 aa22.2■■□□□ 1.14
NCKIPSD-206ENST00000439518 HNRNPA1P09651 372 aaKnown RBP eCLIP22.2■■□□□ 1.14
NCKIPSD-206ENST00000439518 TKTP29401 623 aaKnown RBP22.2■■□□□ 1.14
NCKIPSD-206ENST00000439518 HOXA9P31269 272 aa22.2■■□□□ 1.14
NCKIPSD-206ENST00000439518 GBP2P32456 591 aaPredicted RBP22.2■■□□□ 1.14
NCKIPSD-206ENST00000439518 BRCC3P46736 316 aa22.2■■□□□ 1.14
NCKIPSD-206ENST00000439518 MCM6Q14566 821 aa22.2■■□□□ 1.14
NCKIPSD-206ENST00000439518 PTPAQ15257 358 aa22.2■■□□□ 1.14
NCKIPSD-206ENST00000439518 C18orf25Q96B23 403 aaPredicted RBP22.2■■□□□ 1.14
NCKIPSD-206ENST00000439518 PRRX2Q99811 253 aa22.2■■□□□ 1.14
NCKIPSD-206ENST00000439518 CCSER1Q9C0I3 900 aa22.2■■□□□ 1.14
NCKIPSD-206ENST00000439518 HAPLN2Q9GZV7 340 aa22.2■■□□□ 1.14
NCKIPSD-206ENST00000439518 CITO14578 2027 aa22.19■■□□□ 1.14
NCKIPSD-206ENST00000439518 PODXLO00592 558 aa22.19■■□□□ 1.14
NCKIPSD-206ENST00000439518 C8AP07357 584 aa22.19■■□□□ 1.14
NCKIPSD-206ENST00000439518 SYT1P21579 422 aa22.19■■□□□ 1.14
NCKIPSD-206ENST00000439518 SCP2P22307 547 aa22.19■■□□□ 1.14
NCKIPSD-206ENST00000439518 RPL9P32969 192 aaKnown RBP22.19■■□□□ 1.14
NCKIPSD-206ENST00000439518 RESTQ13127 1097 aa22.19■■□□□ 1.14
NCKIPSD-206ENST00000439518 DHX8Q14562 1220 aaKnown RBP22.19■■□□□ 1.14
NCKIPSD-206ENST00000439518 SEZ6Q53EL9 994 aa22.19■■□□□ 1.14
NCKIPSD-206ENST00000439518 LIN9Q5TKA1 542 aa22.19■■□□□ 1.14
NCKIPSD-206ENST00000439518 ANKS3Q6ZW76 656 aa22.19■■□□□ 1.14
NCKIPSD-206ENST00000439518 RAD54LQ92698 747 aa22.19■■□□□ 1.14
NCKIPSD-206ENST00000439518 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.19■■□□□ 1.14
NCKIPSD-206ENST00000439518 CLIC4Q9Y696 253 aa22.19■■□□□ 1.14
NCKIPSD-206ENST00000439518 INTS4Q96HW7 963 aaKnown RBP22.18■■□□□ 1.14
NCKIPSD-206ENST00000439518 PARVGQ9HBI0 331 aa22.18■■□□□ 1.14
NCKIPSD-206ENST00000439518 TBX20Q9UMR3 447 aa22.18■■□□□ 1.14
NCKIPSD-206ENST00000439518 DUSP12Q9UNI6 340 aa22.18■■□□□ 1.14
NCKIPSD-206ENST00000439518 CDY1Q9Y6F8 540 aa22.18■■□□□ 1.14
NCKIPSD-206ENST00000439518 FAM13AO94988 1023 aa22.17■■□□□ 1.14
NCKIPSD-206ENST00000439518 PIGRP01833 764 aa22.17■■□□□ 1.14
NCKIPSD-206ENST00000439518 CLTAP09496 248 aa22.17■■□□□ 1.14
NCKIPSD-206ENST00000439518 LAMP2P13473 410 aa22.17■■□□□ 1.14
NCKIPSD-206ENST00000439518 TCF15Q12870 199 aa22.17■■□□□ 1.14
NCKIPSD-206ENST00000439518 UVSSAQ2YD98 709 aa22.17■■□□□ 1.14
NCKIPSD-206ENST00000439518 PPM1LQ5SGD2 360 aa22.17■■□□□ 1.14
NCKIPSD-206ENST00000439518 AXDND1Q5T1B0 1012 aaPredicted RBP22.17■■□□□ 1.14
NCKIPSD-206ENST00000439518 USP49Q70CQ1 688 aa22.17■■□□□ 1.14
NCKIPSD-206ENST00000439518 GRASPQ7Z6J2 395 aaPredicted RBP22.17■■□□□ 1.14
NCKIPSD-206ENST00000439518 MYCT1Q8N699 235 aa22.17■■□□□ 1.14
NCKIPSD-206ENST00000439518 SLC7A14Q8TBB6 771 aa22.17■■□□□ 1.14
NCKIPSD-206ENST00000439518 RSAD2Q8WXG1 361 aa22.17■■□□□ 1.14
NCKIPSD-206ENST00000439518 NXPE3Q969Y0 559 aa22.17■■□□□ 1.14
NCKIPSD-206ENST00000439518 FIZ1Q96SL8 496 aa22.17■■□□□ 1.14
NCKIPSD-206ENST00000439518 PLEKHA5Q9HAU0 1116 aa22.17■■□□□ 1.14
NCKIPSD-206ENST00000439518 FBXO2Q9UK22 296 aaPredicted RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms